GEMMA DEVELOPER AGENT
SAVED EVIDENCE
← 31B real rollouts · 480 (exact stack, 32 lanes, 13-Nov)
ROLLOUT 3 · reata/sqllineage

reata__sqllineage-224

Solved
472 stotal time
16tool calls
16model calls
6,180tokens generated
128,023prompt tokens read

Agent exceeded session timeout (7.5 min)

Turn by turn

Token shading: p ≥ 0.9 0.5 – 0.9 0.2 – 0.5 below 0.2. Hover a token for its id and probability.

System instructions 4,822 characters
You are a principal Python software engineer resolving a repository issue in `/workspace`.
Your sole objective is to produce a minimal, root-cause source patch that passes every hidden fail-to-pass and pass-to-pass regression test on the first grading run.

## Critical Environment & Grader Rules
1. **Air-Gapped Sandbox & Available CLI Tools**: No network access. Never run `pip`, `uv`, `conda`, or `git fetch`. Note: `rg` (`ripgrep`) is NOT installed in the container — always use `grep -rn --include="*.py"` for fast exact searches so you never waste a tool call on `command not found`.
2. **Protected Grading Paths**: Before running official verification, the grading harness **strips and reverts all changes** to `tests/`, `test/`, `testing/`, `test_*.py`, `*_test.py`, `conftest.py`, `pyproject.toml`, `setup.cfg`, `pytest.ini`, and `tox.ini`. Every part of your fix MUST reside in non-test production source files.
3. **Untracked File Trap (`git add -N .`)**: `submit_patch` stages ALL untracked files inside `/workspace`! Never leave reproduction or scratch files inside `/workspace` — run reproductions inline via `python3 - <<'PY'` or inside `/tmp/repro.py` in a single `run_command`.
4. **Stdout Truncation Rule**: `run_command` truncates stdout after the first 5,000 characters from the TOP. Always run pytest quietly with short tracebacks:
   `pytest path/to/test_file.py -k pattern -q --tb=short --no-header`
   If a test file is large, redirect output to `/tmp/pytest.log` and inspect `tail -n 80 /tmp/pytest.log` so failure tracebacks at the bottom are never cut off.
5. **Strict Pacing Discipline**: `get_status` and `submit_patch` are free and do NOT count toward `max_tool_calls`. Target **16-22 counted tool calls total**, and **begin your first `edit_file` change no later than tool call 15**. Reserve at least 4 calls for verification, `git status --short && git diff`, and submission.

## Execution Protocol

### Phase 1 — Pinpoint Code & Tests Immediately (1-2 tool calls)
- The user message already contains `Workspace Layout` — do NOT waste a turn running `ls` on top-level directories.
- Run a single compound `run_command` with `grep -rn --include="*.py"` to locate:
  (a) the exact symbols, error strings, or functions from the problem description,
  (b) **all parallel or sibling implementations** (for example sync + async variants, `Client` + `AsyncClient`, serializer + deserializer, multiple backends/dialects, base + subclass methods, `__init__.py` / `__all__` exports), and
  (c) the closest existing unit test files under `tests/`.

### Phase 2 — Deep Read & Spec Anchor (2-5 tool calls)
- Use `read_file` with generous `start_line` and `end_line` windows (180-300 lines per call so you read whole modules in fewer calls) on the target function/class, callers, type annotations, and neighboring tests.
- Before editing, verify every explicit and implicit requirement from the issue: exact parameter names, defaults, boundary/domain edge cases, exception types/messages, `None` vs empty collection vs falsy (`0`, `False`, `""`) semantics, mutability/copying, and return types.

### Phase 3 — Reproduce Bug in One Call (1 tool call)
- Run ONE concise command (`python3 - <<'PY' ... PY` or targeted `pytest ... -q --tb=short --no-header`) via `run_command` to observe the exact pre-fix failure. Do NOT spend multiple tool calls writing separate reproduction scripts.

### Phase 4 — Surgical Implementation Across All Parallel Paths (1-4 tool calls)
- Begin editing by tool call 15! Use `edit_file` with 4-6 lines of exact surrounding context copied from `read_file`.
- Update ALL parallel codepaths (sync/async, multiple classes/dialects, type hints) consistently so partial fixes do not fail sibling tests.
- **2-Strike Edit Rule**: If `edit_file` fails twice on the same block due to whitespace or escaping, do not retry `edit_file` a third time — apply an atomic Python transformation via `run_command` and immediately verify `python3 -m py_compile path/to/file.py`.

### Phase 5 — Edge-Case Verification, Diff Hygiene & Clean Exit (2-4 tool calls)
- Run a single compound `run_command` testing both your reproduction + boundary edge cases (`None`, empty input, leading/trailing delimiters, subdomain/prefix boundaries, subclass/async parity) AND the relevant existing `pytest` module(s) with `-q --tb=short --no-header`.
- Run `git status --short && git diff` via `run_command`. Confirm:
  - ZERO untracked (`??`) files in `/workspace` (`rm -f` any untracked workspace files immediately),
  - ZERO modifications to `tests/` or protected config files (`git checkout -- tests/` if touched),
  - Minimal, clean diff with valid imports and indentation.
- Call `submit_patch` once verification passes, then respond with a brief 2-sentence plain-text summary and make NO further tool calls.
Task prompt 3,058 characters
You are evaluating a software engineering task for repository reata/sqllineage.

Problem Statement:
Table/Column Lineage Mixed up For Self Dependent SQL
```sql
INSERT OVERWRITE TABLE foo
SELECT col FROM foo
WHERE flag IS NOT NULL
```

```
Statements(#): 1
Source Tables:
    <default>.foo
    <default>.foo.col
Target Tables:
    <default>.foo
    <default>.foo.col
```

Column lineage is displayed by mistake here.

## Task Budget (Session terminates when any budget is exhausted)
- Time allowance: 7.5 minutes
- Tool calls allowance: 30 calls
- Max loop iterations: 40 turns

## Execution Environment Rules
- Single command timeout: 90 seconds (commands exceeding this fail without ending the session)
- Command output limit: 5000 characters
- File view limit: 150 lines per read_file call
- File character limit: 10000 characters per read_file call
- Environment is offline (no network/PyPI access). All repository and test dependencies are ALREADY pre-installed. Do NOT attempt to run pip install or download packages.

## Instructions:
0. All source code is under `/workspace`. Do NOT search outside `/workspace` (e.g. `/usr/`, `/wheels/`, system site-packages). If imports fail, the issue is in the source code under `/workspace`, not in missing system packages.
1. Analyze the problem statement and any provided hints carefully to identify all requested script paths, CLI subcommands, or Python modules.
2. Inspect existing codebase conventions and test files before making edits.
3. Verify your implementation using targeted tests or inline assertions before submitting.
4. Call submit_patch only after your implementation is complete and verified.
5. As your final action, you must return a text-only response reporting your completion to terminate the session.
## Workspace Layout
The repository is located at `/workspace`. Here is the directory tree (up to 3 levels):
```
./CONTRIBUTING.md
./Dockerfile
./LICENSE
./MANIFEST.in
./README.md
./docs
./mypy.ini
./setup.py
./sqllineage
./sqllineage/__init__.py
./sqllineage/cli.py
./sqllineage/core
./sqllineage/core/__init__.py
./sqllineage/core/analyzer.py
./sqllineage/core/handlers
./sqllineage/core/holders.py
./sqllineage/core/models.py
./sqllineage/data
./sqllineage/data/tpcds
./sqllineage/drawing.py
./sqllineage/exceptions.py
./sqllineage/io.py
./sqllineage/runner.py
./sqllineage/utils
./sqllineage/utils/__init__.py
./sqllineage/utils/constant.py
./sqllineage/utils/entities.py
./sqllineage/utils/helpers.py
./sqllineage/utils/sqlparse.py
./sqllineagejs
./sqllineagejs/config-overrides.js
./sqllineagejs/package-lock.json
./sqllineagejs/package.json
./sqllineagejs/public
./sqllineagejs/public/favicon.ico
./sqllineagejs/public/index.html
./sqllineagejs/public/logo192.png
./sqllineagejs/public/logo512.png
./sqllineagejs/public/manifest.json
./sqllineagejs/public/robots.txt
./sqllineagejs/src
./sqllineagejs/src/App.js
./sqllineagejs/src/api
./sqllineagejs/src/app
./sqllineagejs/src/features
./sqllineagejs/src/index.css
./sqllineagejs/src/index.js
./tests
./tox.ini
```
Turn 1at 37 s279 tokens out2,981 prompt tokens
The user is reporting a bug in `sqllineage` where column lineage is incorrectly displayed for self-dependent SQL statements.
Example: `INSERT OVERWRITE TABLE foo SELECT col FROM foo WHERE flag IS NOT NULL`.
Expected outcome:
Source Tables: `<default>.foo`
Target Tables: `<default>.foo`

Actual outcome (according to the report):
Source Tables: `<default>.foo`, `<default>.foo.col`
Target Tables: `<default>.foo`, `<default>.foo.col`

Wait, the report says "Column lineage is displayed by mistake here".
It seems that `foo.col` is being listed as a table, or the output format is mixing tables and columns.

Let's explore the codebase to understand how lineage is calculated and displayed.

First, I'll try to reproduce this issue with a small script.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom sqllineage.runner import LineageRunner\n\nsql = \"INSERT OVERWRITE TABLE foo SELECT col FROM foo WHERE flag IS NOT NULL\"\nrunner = LineageRunner(sql)\nprint(f\"Source Tables: {runner.source_tables}\")\nprint(f\"Target Tables: {runner.target_tables}\")\nPY\n"
}
Result of run_command 192 characters
{
  "status": "ok",
  "stdout": "Source Tables: [Table: <default>.foo, Column: <default>.foo.col]\nTarget Tables: [Table: <default>.foo, Column: <default>.foo.col]\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 279 tokens · stopped: STOP
<|channel>thought The user is reporting a bug in `sqllineage` where column lineage is incorrectly displayed for self-dependent SQL statements. Example: `INSERT OVERWRITE TABLE foo SELECT col FROM foo WHERE flag IS NOT NULL`. Expected outcome: Source Tables: `<default>.foo` Target Tables: `<default>.foo` Actual outcome (according to the report): Source Tables: `<default>.foo`, `<default>.foo.col` Target Tables: `<default>.foo`, `<default>.foo.col` Wait, the report says "Column lineage is displayed by mistake here". It seems that `foo.col` is being listed as a table, or the output format is mixing tables and columns. Let's explore the codebase to understand how lineage is calculated and displayed. First, I'll try to reproduce this issue with a small script.<channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from sqllineage.runner import LineageRunner sql = "INSERT OVERWRITE TABLE foo SELECT col FROM foo WHERE flag IS NOT NULL" runner = LineageRunner(sql) print(f"Source Tables: {runner.source_tables}") print(f"Target Tables: {runner.target_tables}") PY <|"|>}<tool_call|><|tool_response>
Turn 2at 52 s163 tokens out3,341 prompt tokens
Okay, the reproduction script confirms the issue. `Column: <default>.foo.col` is appearing in both source and target tables lists. This is definitely wrong; columns shouldn't be in the table lists.

Now I need to find where the lineage is analyzed and how these lists are populated.
Based on the workspace layout, `sqllineage/core/analyzer.py` seems like the most likely place.

I'll start by searching for where `source_tables` and `target_tables` are managed or where the insertion logic happens. `LineageRunner` probably uses an analyzer.
TOOL CALL · run_command
{
  "command": "grep -rn --include=\"*.py\" \"source_tables\" sqllineage/core/"
}
Result of run_command 414 characters
{
  "status": "ok",
  "stdout": "sqllineage/core/holders.py:178:    def source_tables(self) -> Set[Table]:\nsqllineage/core/holders.py:182:        source_tables = {\nsqllineage/core/holders.py:187:        source_tables |= self._selfloop_tables\nsqllineage/core/holders.py:188:        source_tables |= self._sourceonly_tables\nsqllineage/core/holders.py:189:        return source_tables\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 163 tokens · stopped: STOP
Okay, the reproduction script confirms the issue. `Column: <default>.foo.col` is appearing in both source and target tables lists. This is definitely wrong; columns shouldn't be in the table lists. Now I need to find where the lineage is analyzed and how these lists are populated. Based on the workspace layout, `sqllineage/core/analyzer.py` seems like the most likely place. I'll start by searching for where `source_tables` and `target_tables` are managed or where the insertion logic happens. `LineageRunner` probably uses an analyzer.<channel|><|tool_call>call:run_command{command:<|"|>grep -rn --include="*.py" "source_tables" sqllineage/core/<|"|>}<tool_call|><|tool_response>
Turn 3at 56 s76 tokens out3,673 prompt tokens
`sqllineage/core/holders.py` seems relevant. Let's also check `sqllineage/core/analyzer.py`.
And `sqllineage/runner.py` to see how it interacts with these.
TOOL CALL · read_file
{
  "filepath": "sqllineage/runner.py"
}
Result of read_file 5,132 characters
{
  "status": "ok",
  "filepath": "sqllineage/runner.py",
  "content": "import logging\nfrom typing import Dict, List, Tuple\n\nimport sqlparse\nfrom sqlparse.sql import Statement\n\nfrom sqllineage.core import LineageAnalyzer\nfrom sqllineage.core.holders import SQLLineageHolder\nfrom sqllineage.core.models import Column, Table\nfrom sqllineage.drawing import draw_lineage_graph\nfrom sqllineage.io import to_cytoscape\nfrom sqllineage.utils.constant import LineageLevel\n\n\nlogger = logging.getLogger(__name__)\n\n\ndef lazy_method(func):\n    def wrapper(*args, **kwargs):\n        self = args[0]\n        if not self._evaluated:\n            self._eval()\n        return func(*args, **kwargs)\n\n    return wrapper\n\n\ndef lazy_property(func):\n    return property(lazy_method(func))\n\n\nclass LineageRunner(object):\n    def __init__(\n        self,\n        sql: str,\n        encoding: str = None,\n        verbose: bool = False,\n        draw_options: Dict[str, str] = None,\n    ):\n        \"\"\"\n        The entry point of SQLLineage after command line options are parsed.\n\n        :param sql: a string representation of SQL statements.\n        :param encoding: the encoding for sql string\n        :param verbose: verbose flag indicate whether statement-wise lineage result will be shown\n        \"\"\"\n        self._encoding = encoding\n        self._sql = sql\n        self._verbose = verbose\n        self._draw_options = draw_options if draw_options else {}\n        self._evaluated = False\n        self._stmt: List[Statement] = []\n\n    @lazy_method\n    def __str__(self):\n        \"\"\"\n        print out the Lineage Summary.\n        \"\"\"\n        statements = self.statements(strip_comments=True)\n        source_tables = \"\\n    \".join(str(t) for t in self.source_tables)\n        target_tables = \"\\n    \".join(str(t) for t in self.target_tables)\n        combined = f\"\"\"Statements(#): {len(statements)}\nSource Tables:\n    {source_tables}\nTarget Tables:\n    {target_tables}\n\"\"\"\n        if self.intermediate_tables:\n            intermediate_tables = \"\\n    \".join(\n                str(t) for t in self.intermediate_tables\n            )\n            combined += f\"\"\"Intermediate Tables:\n    {intermediate_tables}\"\"\"\n        if self._verbose:\n            result = \"\"\n            for i, holder in enumerate(self._stmt_holders):\n                stmt_short = statements[i].replace(\"\\n\", \"\")\n                if len(stmt_short) > 50:\n                    stmt_short = stmt_short[:50] + \"...\"\n                content = str(holder).replace(\"\\n\", \"\\n    \")\n                result += f\"\"\"Statement #{i + 1}: {stmt_short}\n    {content}\n\"\"\"\n            combined = result + \"==========\\nSummary:\\n\" + combined\n        return combined\n\n    @lazy_method\n    def to_cytoscape(self, level=LineageLevel.TABLE) -> List[Dict[str, Dict[str, str]]]:\n        \"\"\"\n        to turn the DAG into cytoscape format.\n        \"\"\"\n        if level == LineageLevel.COLUMN:\n            return to_cytoscape(self._sql_holder.column_lineage_graph, compound=True)\n        else:\n            return to_cytoscape(self._sql_holder.table_lineage_graph)\n\n    def draw(self) -> None:\n        \"\"\"\n        to draw the lineage directed graph\n        \"\"\"\n        draw_options = self._draw_options\n        if draw_options.get(\"f\") is None:\n            draw_options.pop(\"f\", None)\n            draw_options[\"e\"] = self._sql\n        return draw_lineage_graph(**draw_options)\n\n    @lazy_method\n    def statements(self, **kwargs) -> List[str]:\n        \"\"\"\n        a list of statements.\n\n        :param kwargs: the key arguments that will be passed to `sqlparse.format`\n        \"\"\"\n        return [sqlparse.format(s.value, **kwargs) for s in self.statements_parsed]\n\n    @lazy_property\n    def statements_parsed(self) -> List[Statement]:\n        \"\"\"\n        a list of :class:`sqlparse.sql.Statement`\n        \"\"\"\n        return self._stmt\n\n    @lazy_property\n    def source_tables(self) -> List[Table]:\n        \"\"\"\n        a list of source :class:`sqllineage.models.Table`\n        \"\"\"\n        return sorted(self._sql_holder.source_tables, key=lambda x: str(x))\n\n    @lazy_property\n    def target_tables(self) -> List[Table]:\n        \"\"\"\n        a list of target :class:`sqllineage.models.Table`\n        \"\"\"\n        return sorted(self._sql_holder.target_tables, key=lambda x: str(x))\n\n    @lazy_property\n    def intermediate_tables(self) -> List[Table]:\n        \"\"\"\n        a list of intermediate :class:`sqllineage.models.Table`\n        \"\"\"\n        return sorted(self._sql_holder.intermediate_tables, key=lambda x: str(x))\n\n    @lazy_method\n    def get_column_lineage(self, exclude_subquery=True) -> List[Tuple[Column, Column]]:\n        \"\"\"\n        a list of column tuple :class:`sqllineage.models.Column`\n        \"\"\"\n        # sort by target column, and then source column\n        return sorted(",
  "start_line": 1,
  "end_line": 150,
  "total_lines": 181,
  "is_truncated": true
}
Generated tokens 76 tokens · stopped: STOP
`sqllineage/core/holders.py` seems relevant. Let's also check `sqllineage/core/analyzer.py`. And `sqllineage/runner.py` to see how it interacts with these. <channel|><|tool_call>call:read_file{filepath:<|"|>sqllineage/runner.py<|"|>}<tool_call|><|tool_response>
Turn 4at 64 s108 tokens out5,283 prompt tokens
`LineageRunner` creates a `_sql_holder` and uses its `source_tables`, `target_tables`, and `intermediate_tables` properties.
It seems these are properties of `SQLLineageHolder`.

Let's look at `sqllineage/core/holders.py`.
TOOL CALL · read_file
{
  "end_line": 220,
  "filepath": "sqllineage/core/holders.py",
  "start_line": 130
}
Result of read_file 3,474 characters
{
  "status": "ok",
  "filepath": "sqllineage/core/holders.py",
  "content": "\n    @property\n    def rename(self) -> Set[Tuple[Table, Table]]:\n        return {\n            (src, tgt)\n            for src, tgt, attr in self.graph.edges(data=True)\n            if attr.get(\"type\") == EdgeType.RENAME\n        }\n\n    def add_rename(self, src: Table, tgt: Table) -> None:\n        self.graph.add_edge(src, tgt, type=EdgeType.RENAME)\n\n    @staticmethod\n    def of(holder: SubQueryLineageHolder):\n        stmt_holder = StatementLineageHolder()\n        stmt_holder.graph = holder.graph\n        return stmt_holder\n\n\nclass SQLLineageHolder(ColumnLineageMixin):\n    def __init__(self, graph: DiGraph):\n        \"\"\"\n        The combined lineage result in representation of Directed Acyclic Graph.\n\n        :param graph: the Directed Acyclic Graph holding all the combined lineage result.\n        \"\"\"\n        self.graph = graph\n        self._selfloop_tables = self.__retrieve_tag_tables(NodeTag.SELFLOOP)\n        self._sourceonly_tables = self.__retrieve_tag_tables(NodeTag.SOURCE_ONLY)\n        self._targetonly_tables = self.__retrieve_tag_tables(NodeTag.TARGET_ONLY)\n\n    @property\n    def table_lineage_graph(self) -> DiGraph:\n        \"\"\"\n        The table level DiGraph held by SQLLineageHolder\n        \"\"\"\n        table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)]\n        return self.graph.subgraph(table_nodes)\n\n    @property\n    def column_lineage_graph(self) -> DiGraph:\n        \"\"\"\n        The column level DiGraph held by SQLLineageHolder\n        \"\"\"\n        column_nodes = [n for n in self.graph.nodes if isinstance(n, Column)]\n        return self.graph.subgraph(column_nodes)\n\n    @property\n    def source_tables(self) -> Set[Table]:\n        \"\"\"\n        a list of source :class:`sqllineage.models.Table`\n        \"\"\"\n        source_tables = {\n            table for table, deg in self.table_lineage_graph.in_degree if deg == 0\n        }.intersection(\n            {table for table, deg in self.table_lineage_graph.out_degree if deg > 0}\n        )\n        source_tables |= self._selfloop_tables\n        source_tables |= self._sourceonly_tables\n        return source_tables\n\n    @property\n    def target_tables(self) -> Set[Table]:\n        \"\"\"\n        a list of target :class:`sqllineage.models.Table`\n        \"\"\"\n        target_tables = {\n            table for table, deg in self.table_lineage_graph.out_degree if deg == 0\n        }.intersection(\n            {table for table, deg in self.table_lineage_graph.in_degree if deg > 0}\n        )\n        target_tables |= self._selfloop_tables\n        target_tables |= self._targetonly_tables\n        return target_tables\n\n    @property\n    def intermediate_tables(self) -> Set[Table]:\n        \"\"\"\n        a list of intermediate :class:`sqllineage.models.Table`\n        \"\"\"\n        intermediate_tables = {\n            table for table, deg in self.table_lineage_graph.in_degree if deg > 0\n        }.intersection(\n            {table for table, deg in self.table_lineage_graph.out_degree if deg > 0}\n        )\n        intermediate_tables -= self.__retrieve_tag_tables(NodeTag.SELFLOOP)\n        return intermediate_tables\n\n    def __retrieve_tag_tables(self, tag) -> Set[Table]:\n        return {\n            table",
  "start_line": 130,
  "end_line": 220,
  "total_lines": 280,
  "is_truncated": false
}
Generated tokens 108 tokens · stopped: STOP
`LineageRunner` creates a `_sql_holder` and uses its `source_tables`, `target_tables`, and `intermediate_tables` properties. It seems these are properties of `SQLLineageHolder`. Let's look at `sqllineage/core/holders.py`. <channel|><|tool_call>call:read_file{filepath:<|"|>sqllineage/core/holders.py<|"|>,start_line:130,end_line:220}<tool_call|><|tool_response>
Turn 5at 81 s253 tokens out6,444 prompt tokens
The `source_tables` and `target_tables` properties in `SQLLineageHolder` use `self.table_lineage_graph`.

```python
    @property
    def table_lineage_graph(self) -> DiGraph:\n        \"\"\"\n        The table level DiGraph held by SQLLineageHolder\n        \"\"\"\n        table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)]\n        return self.graph.subgraph(table_nodes)\n```

Wait, `DATASET_CLASSES` is probably where the issue is. If it includes `Column`, then `table_lineage_graph` will actually include columns.

Let's find where `DATASET_CLASSES` is defined. It's probably imported in `sqllineage/core/holders.py`.

Let's look at the beginning of `sqllineage/core/holders.py`.
TOOL CALL · read_file
{
  "end_line": 100,
  "filepath": "sqllineage/core/holders.py",
  "start_line": 1
}
Result of read_file 3,989 characters
{
  "status": "ok",
  "filepath": "sqllineage/core/holders.py",
  "content": "import itertools\nfrom typing import Set, Tuple, Union\n\nimport networkx as nx\nfrom networkx import DiGraph\n\nfrom sqllineage.core.models import Column, Path, SubQuery, Table\nfrom sqllineage.utils.constant import EdgeType, NodeTag\n\nDATASET_CLASSES = (Path, Table)\n\n\nclass ColumnLineageMixin:\n    def get_column_lineage(self, exclude_subquery=True) -> Set[Tuple[Column, ...]]:\n        self.graph: DiGraph  # For mypy attribute checking\n        # filter all the column node in the graph\n        column_nodes = [n for n in self.graph.nodes if isinstance(n, Column)]\n        column_graph = self.graph.subgraph(column_nodes)\n        source_columns = {column for column, deg in column_graph.in_degree if deg == 0}\n        # if a column lineage path ends at SubQuery, then it should be pruned\n        target_columns = {\n            node\n            for node, deg in column_graph.out_degree\n            if isinstance(node, Column) and deg == 0\n        }\n        if exclude_subquery:\n            target_columns = {\n                node for node in target_columns if isinstance(node.parent, Table)\n            }\n        columns = set()\n        for (source, target) in itertools.product(source_columns, target_columns):\n            simple_paths = list(nx.all_simple_paths(self.graph, source, target))\n            if len(simple_paths) == 1:\n                columns.add(tuple(simple_paths[0]))\n            # we can ignore when simple path doesn't exist, but could there be more than one simple path?\n        return columns\n\n\nclass SubQueryLineageHolder(ColumnLineageMixin):\n    \"\"\"\n    SubQuery/Query Level Lineage Result.\n\n    SubQueryLineageHolder will hold attributes like read, write, cte\n\n    Each of them is a Set[:class:`sqllineage.models.Table`].\n\n    This is the most atomic representation of lineage result.\n    \"\"\"\n\n    def __init__(self) -> None:\n        self.graph = nx.DiGraph()\n\n    def __or__(self, other):\n        self.graph = nx.compose(self.graph, other.graph)\n        return self\n\n    def _property_getter(self, prop) -> Set[Union[SubQuery, Table]]:\n        return {t for t, attr in self.graph.nodes(data=True) if attr.get(prop) is True}\n\n    def _property_setter(self, value, prop) -> None:\n        self.graph.add_node(value, **{prop: True})\n\n    @property\n    def read(self) -> Set[Union[SubQuery, Table]]:\n        return self._property_getter(NodeTag.READ)\n\n    def add_read(self, value) -> None:\n        self._property_setter(value, NodeTag.READ)\n        # the same table can be added (in SQL: joined) multiple times with different alias\n        if hasattr(value, \"alias\"):\n            self.graph.add_edge(value, value.alias, type=EdgeType.HAS_ALIAS)\n\n    @property\n    def write(self) -> Set[Union[SubQuery, Table]]:\n        return self._property_getter(NodeTag.WRITE)\n\n    def add_write(self, value) -> None:\n        self._property_setter(value, NodeTag.WRITE)\n\n    @property\n    def cte(self) -> Set[SubQuery]:\n        return self._property_getter(NodeTag.CTE)  # type: ignore\n\n    def add_cte(self, value) -> None:\n        self._property_setter(value, NodeTag.CTE)\n\n    def add_column_lineage(self, src: Column, tgt: Column) -> None:\n        self.graph.add_edge(src, tgt, type=EdgeType.LINEAGE)\n        self.graph.add_edge(tgt.parent, tgt, type=EdgeType.HAS_COLUMN)\n        if src.parent is not None:\n            # starting NetworkX v2.6, None is not allowed as node, see https://github.com/networkx/networkx/pull/4892\n            self.graph.add_edge(src.parent, src, type=EdgeType.HAS_COLUMN)\n\n\nclass StatementLineageHolder(SubQueryLineageHolder, ColumnLineageMixin):\n    \"\"\"\n    Statement Level Lineage Result.\n\n    Based on SubQueryLineageHolder, StatementLineageHolder holds extra attributes like drop and rename\n",
  "start_line": 1,
  "end_line": 100,
  "total_lines": 280,
  "is_truncated": false
}
Generated tokens 253 tokens · stopped: STOP
The `source_tables` and `target_tables` properties in `SQLLineageHolder` use `self.table_lineage_graph`. ```python @property def table_lineage_graph(self) -> DiGraph:\n \"\"\"\n The table level DiGraph held by SQLLineageHolder\n \"\"\"\n table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)]\n return self.graph.subgraph(table_nodes)\n``` Wait, `DATASET_CLASSES` is probably where the issue is. If it includes `Column`, then `table_lineage_graph` will actually include columns. Let's find where `DATASET_CLASSES` is defined. It's probably imported in `sqllineage/core/holders.py`. Let's look at the beginning of `sqllineage/core/holders.py`. <channel|><|tool_call>call:read_file{filepath:<|"|>sqllineage/core/holders.py<|"|>,start_line:1,end_line:100}<tool_call|><|tool_response>
Turn 6at 107 s468 tokens out7,917 prompt tokens
`DATASET_CLASSES = (Path, Table)`. `Column` is NOT in `DATASET_CLASSES`.

So why is `Column: <default>.foo.col` appearing in `source_tables` and `target_tables`?

Let's look at `source_tables` again:
```python
    @property
    def source_tables(self) -> Set[Table]:
        \"\"\"\n        a list of source :class:`sqllineage.models.Table`\n        \"\"\"\n        source_tables = {\n            table for table, deg in self.table_lineage_graph.in_degree if deg == 0\n        }.intersection(\n            {table for table, deg in self.table_lineage_graph.out_degree if deg > 0}\n        )\n        source_tables |= self._selfloop_tables\n        source_tables |= self._sourceonly_tables\n        return source_tables\n```

And `table_lineage_graph`:
```python
    @property
    def table_lineage_graph(self) -> DiGraph:
        \"\"\"\n        The table level DiGraph held by SQLLineageHolder\n        \"\"\"\n        table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)]\n        return self.graph.subgraph(table_nodes)\n```

If `n` is an instance of `Column`, it should NOT be in `table_nodes`.

Wait, let's look at the output of my reproduction script again:
`Source Tables: [Table: <default>.foo, Column: <default>.foo.col]`

Wait, it says `Column: <default>.foo.col`. This means it's an instance of `Column`.

Is it possible that `Column` is a subclass of `Table` or `Path`?
Let's check `sqllineage/core/models.py`.
TOOL CALL · read_file
{
  "filepath": "sqllineage/core/models.py"
}
Result of read_file 4,606 characters
{
  "status": "ok",
  "filepath": "sqllineage/core/models.py",
  "content": "import warnings\nfrom typing import Dict, List, Optional, Set, Union\n\nfrom sqlparse import tokens as T\nfrom sqlparse.engine import grouping\nfrom sqlparse.sql import (\n    Case,\n    Comparison,\n    Function,\n    Identifier,\n    IdentifierList,\n    Operation,\n    Parenthesis,\n    Token,\n    TokenList,\n)\nfrom sqlparse.utils import imt\n\nfrom sqllineage.exceptions import SQLLineageException\nfrom sqllineage.utils.entities import ColumnQualifierTuple\nfrom sqllineage.utils.helpers import escape_identifier_name\nfrom sqllineage.utils.sqlparse import get_parameters, is_subquery\n\n\nclass Schema:\n    unknown = \"<default>\"\n\n    def __init__(self, name: str = unknown):\n        \"\"\"\n        Data Class for Schema\n\n        :param name: schema name\n        \"\"\"\n        self.raw_name = escape_identifier_name(name)\n\n    def __str__(self):\n        return self.raw_name.lower()\n\n    def __repr__(self):\n        return \"Schema: \" + str(self)\n\n    def __eq__(self, other):\n        return type(self) is type(other) and str(self) == str(other)\n\n    def __hash__(self):\n        return hash(str(self))\n\n    def __bool__(self):\n        return str(self) != self.unknown\n\n\nclass Table:\n    def __init__(self, name: str, schema: Schema = Schema(), **kwargs):\n        \"\"\"\n        Data Class for Table\n\n        :param name: table name\n        :param schema: schema as defined by :class:`Schema`\n        \"\"\"\n        if \".\" not in name:\n            self.schema = schema\n            self.raw_name = escape_identifier_name(name)\n        else:\n            schema_name, table_name = name.rsplit(\".\", 1)\n            if len(schema_name.split(\".\")) > 2:\n                # allow db.schema as schema_name, but a.b.c as schema_name is forbidden\n                raise SQLLineageException(\"Invalid format for table name: %s.\", name)\n            self.schema = Schema(schema_name)\n            self.raw_name = escape_identifier_name(table_name)\n            if schema:\n                warnings.warn(\"Name is in schema.table format, schema param is ignored\")\n        self.alias = kwargs.pop(\"alias\", self.raw_name)\n\n    def __str__(self):\n        return f\"{self.schema}.{self.raw_name.lower()}\"\n\n    def __repr__(self):\n        return \"Table: \" + str(self)\n\n    def __eq__(self, other):\n        return type(self) is type(other) and str(self) == str(other)\n\n    def __hash__(self):\n        return hash(str(self))\n\n    @staticmethod\n    def of(identifier: Identifier) -> \"Table\":\n        # rewrite identifier's get_real_name method, by matching the last dot instead of the first dot, so that the\n        # real name for a.b.c will be c instead of b\n        dot_idx, _ = identifier._token_matching(\n            lambda token: imt(token, m=(T.Punctuation, \".\")),\n            start=len(identifier.tokens),\n            reverse=True,\n        )\n        real_name = identifier._get_first_name(dot_idx, real_name=True)\n        # rewrite identifier's get_parent_name accordingly\n        parent_name = (\n            \"\".join(\n                [\n                    escape_identifier_name(token.value)\n                    for token in identifier.tokens[:dot_idx]\n                ]\n            )\n            if dot_idx\n            else None\n        )\n        schema = Schema(parent_name) if parent_name is not None else Schema()\n        alias = identifier.get_alias()\n        kwargs = {\"alias\": alias} if alias else {}\n        return Table(real_name, schema, **kwargs)\n\n\nclass Path:\n    def __init__(self, uri: str):\n        self.uri = escape_identifier_name(uri)\n\n    def __str__(self):\n        return self.uri\n\n    def __repr__(self):\n        return \"Path: \" + str(self)\n\n    def __eq__(self, other):\n        return type(self) is type(other) and self.uri == other.uri\n\n    def __hash__(self):\n        return hash(self.uri)\n\n\nclass Partition:\n    pass\n\n\nclass SubQuery:\n    def __init__(self, token: Parenthesis, alias: Optional[str]):\n        \"\"\"\n        Data Class for SubQuery\n\n        :param token: subquery token\n        :param alias: subquery name\n        \"\"\"\n        self.token = token\n        self._query = token.value\n        self.alias = alias if alias is not None else f\"subquery_{hash(self)}\"\n\n    def __str__(self):\n        return self.alias\n\n    def __repr__(self):\n        return \"SubQuery: \" + str(self)",
  "start_line": 1,
  "end_line": 150,
  "total_lines": 348,
  "is_truncated": true
}
Generated tokens 468 tokens · stopped: STOP
`DATASET_CLASSES = (Path, Table)`. `Column` is NOT in `DATASET_CLASSES`. So why is `Column: <default>.foo.col` appearing in `source_tables` and `target_tables`? Let's look at `source_tables` again: ```python @property def source_tables(self) -> Set[Table]: \"\"\"\n a list of source :class:`sqllineage.models.Table`\n \"\"\"\n source_tables = {\n table for table, deg in self.table_lineage_graph.in_degree if deg == 0\n }.intersection(\n {table for table, deg in self.table_lineage_graph.out_degree if deg > 0}\n )\n source_tables |= self._selfloop_tables\n source_tables |= self._sourceonly_tables\n return source_tables\n``` And `table_lineage_graph`: ```python @property def table_lineage_graph(self) -> DiGraph: \"\"\"\n The table level DiGraph held by SQLLineageHolder\n \"\"\"\n table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)]\n return self.graph.subgraph(table_nodes)\n``` If `n` is an instance of `Column`, it should NOT be in `table_nodes`. Wait, let's look at the output of my reproduction script again: `Source Tables: [Table: <default>.foo, Column: <default>.foo.col]` Wait, it says `Column: <default>.foo.col`. This means it's an instance of `Column`. Is it possible that `Column` is a subclass of `Table` or `Path`? Let's check `sqllineage/core/models.py`. <channel|><|tool_call>call:read_file{filepath:<|"|>sqllineage/core/models.py<|"|>}<tool_call|><|tool_response>
Turn 7at 114 s58 tokens out9,764 prompt tokens
Wait, I need to see the `Column` class in `sqllineage/core/models.py`.
TOOL CALL · read_file
{
  "filepath": "sqllineage/core/models.py",
  "start_line": 151
}
Result of read_file 6,008 characters
{
  "status": "ok",
  "filepath": "sqllineage/core/models.py",
  "content": "\n    def __eq__(self, other):\n        return type(self) is type(other) and self._query == other._query\n\n    def __hash__(self):\n        return hash(self._query)\n\n    @staticmethod\n    def of(parenthesis: Parenthesis, alias: Optional[str]) -> \"SubQuery\":\n        return SubQuery(parenthesis, alias)\n\n\nclass Column:\n    def __init__(self, name: str, **kwargs):\n        \"\"\"\n        Data Class for Column\n\n        :param name: column name\n        :param parent: :class:`Table` or :class:`SubQuery`\n        :param kwargs:\n        \"\"\"\n        self._parent: Set[Union[Table, SubQuery]] = set()\n        self.raw_name = escape_identifier_name(name)\n        self.source_columns = kwargs.pop(\"source_columns\", ((self.raw_name, None),))\n\n    def __str__(self):\n        return (\n            f\"{self.parent}.{self.raw_name.lower()}\"\n            if self.parent is not None and not isinstance(self.parent, Path)\n            else f\"{self.raw_name.lower()}\"\n        )\n\n    def __repr__(self):\n        return \"Column: \" + str(self)\n\n    def __eq__(self, other):\n        return type(self) is type(other) and str(self) == str(other)\n\n    def __hash__(self):\n        return hash(str(self))\n\n    @property\n    def parent(self) -> Optional[Union[Table, SubQuery]]:\n        return list(self._parent)[0] if len(self._parent) == 1 else None\n\n    @parent.setter\n    def parent(self, value: Union[Table, SubQuery]):\n        self._parent.add(value)\n\n    @property\n    def parent_candidates(self) -> List[Union[Table, SubQuery]]:\n        return sorted(self._parent, key=lambda p: str(p))\n\n    @staticmethod\n    def of(token: Token):\n        if isinstance(token, Identifier):\n            alias = token.get_alias()\n            if alias:\n                # handle column alias, including alias for column name or Case, Function\n                kw_idx, kw = token.token_next_by(m=(T.Keyword, \"AS\"))\n                if kw_idx is None:\n                    # alias without AS\n                    kw_idx, _ = token.token_next_by(i=Identifier)\n                if kw_idx is None:\n                    # invalid syntax: col AS, without alias\n                    return Column(alias)\n                else:\n                    idx, _ = token.token_prev(kw_idx, skip_cm=True)\n                    expr = grouping.group(TokenList(token.tokens[: idx + 1]))[0]\n                    source_columns = Column._extract_source_columns(expr)\n                    return Column(alias, source_columns=source_columns)\n            else:\n                # select column name directly without alias\n                return Column(\n                    token.get_real_name(),\n                    source_columns=((token.get_real_name(), token.get_parent_name()),),\n                )\n        else:\n            # Wildcard, Case, Function without alias (thus not recognized as an Identifier)\n            source_columns = Column._extract_source_columns(token)\n            return Column(token.value, source_columns=source_columns)\n\n    @staticmethod\n    def _extract_source_columns(token: Token) -> List[ColumnQualifierTuple]:\n        if isinstance(token, Function):\n            # max(col1) AS col2\n            source_columns = [\n                cqt\n                for tk in get_parameters(token)\n                for cqt in Column._extract_source_columns(tk)\n            ]\n        elif isinstance(token, Parenthesis):\n            if is_subquery(token):\n                # This is to avoid circular import\n                from sqllineage.runner import LineageRunner\n\n                # (SELECT avg(col1) AS col1 FROM tab3), used after WHEN or THEN in CASE clause\n                src_cols = [\n                    lineage[0]\n                    for lineage in LineageRunner(token.value).get_column_lineage(\n                        exclude_subquery=False\n                    )\n                ]\n                source_columns = [\n                    ColumnQualifierTuple(src_col.raw_name, src_col.parent.raw_name)\n                    for src_col in src_cols\n                ]\n            else:\n                # (col1 + col2) AS col3\n                source_columns = [\n                    cqt\n                    for tk in token.tokens[1:-1]\n                    for cqt in Column._extract_source_columns(tk)\n                ]\n        elif isinstance(token, Operation):\n            # col1 + col2 AS col3\n            source_columns = [\n                cqt\n                for tk in token.get_sublists()\n                for cqt in Column._extract_source_columns(tk)\n            ]\n        elif isinstance(token, Case):\n            # CASE WHEN col1 = 2 THEN \"V1\" WHEN col1 = \"2\" THEN \"V2\" END AS col2\n            source_columns = [\n                cqt\n                for tk in token.get_sublists()\n                for cqt in Column._extract_source_columns(tk)\n            ]\n        elif isinstance(token, Comparison):\n            source_columns = Column._extract_source_columns(\n                token.left\n            ) + Column._extract_source_columns(token.right)\n        elif isinstance(token, IdentifierList):\n            source_columns = [\n                cqt\n                for tk in token.get_sublists()\n                for cqt in Column._extract_source_columns(tk)\n            ]\n        elif isinstance(token, Identifier):\n            if token.get_real_name():\n                # col1 AS col2\n                source_columns = [\n                    ColumnQualifierTuple(token.get_real_name(), token.get_parent_name())\n                ]\n            else:\n                # col1=1 AS int\n                source_columns = [\n                    cqt\n                    for tk in token.get_sublists()\n                    for cqt in Column._extract_source_columns(tk)",
  "start_line": 151,
  "end_line": 300,
  "total_lines": 348,
  "is_truncated": true
}
Generated tokens 58 tokens · stopped: STOP
Wait, I need to see the `Column` class in `sqllineage/core/models.py`. <channel|><|tool_call>call:read_file{filepath:<|"|>sqllineage/core/models.py<|"|>,start_line:151}<tool_call|><|tool_response>
Turn 8at 166 s880 tokens out11,423 prompt tokens
`Column` does not inherit from `Table` or `Path`.

Wait, look at `sqllineage/core/holders.py` again:
```python
    @property
    def table_lineage_graph(self) -> DiGraph:
        """
        The table level DiGraph held by SQLLineageHolder
        """
        table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)]
        return self.graph.subgraph(table_nodes)
```

If `Column` is not in `DATASET_CLASSES`, then `table_nodes` should only contain `Table` and `Path` instances.

Wait, look at the reproduction output again:
`Source Tables: [Table: <default>.foo, Column: <default>.foo.col]`

Wait, if `sqllineage/runner.py` does this:
```python
    @lazy_property
    def source_tables(self) -> List[Table]:
        """
        a list of source :class:`sqllineage.models.Table`
        """
        return sorted(self._sql_holder.source_tables, key=lambda x: str(x))
```
And `self._sql_holder.source_tables` returns a `Set[Table]`.

If it contains a `Column` object, then `self._sql_holder.source_tables` must have it.

Let's look at `sqllineage/core/holders.py`'s `source_tables` property again.

```python
    @property
    def source_tables(self) -> Set[Table]:
        """
        a list of source :class:`sqllineage.models.Table`
        """
        source_tables = {
            table for table, deg in self.table_lineage_graph.in_degree if deg == 0
        }.intersection(
            {table for table, deg in self.table_lineage_graph.out_degree if deg > 0}
        )
        source_tables |= self._selfloop_tables
        source_tables |= self._sourceonly_tables
        return source_tables
```

`source_tables` could be getting columns from `self._selfloop_tables` or `self._sourceonly_tables`.

Let's see how these are initialized:
```python
class SQLLineageHolder(ColumnLineageMixin):
    def __init__(self, graph: DiGraph):
        """
        The combined lineage result in representation of Directed Acyclic Graph.

        :param graph: the Directed Acyclic Graph holding all the combined lineage result.
        """
        self.graph = graph
        self._selfloop_tables = self.__retrieve_tag_tables(NodeTag.SELFLOOP)
        self._sourceonly_tables = self.__retrieve_tag_tables(NodeTag.SOURCE_ONLY)
        self._targetonly_tables = self.__retrieve_tag_tables(NodeTag.TARGET_ONLY)
```

And `__retrieve_tag_tables`:
```python
    def __retrieve_tag_tables(self, tag) -> Set[Table]:
        return {
            table for table, attr in self.graph.nodes(data=True) if attr.get(tag) is True
        }
```

So if a `Column` node in `self.graph` has the tag `NodeTag.SELFLOOP`, `NodeTag.SOURCE_ONLY`, or `NodeTag.TARGET_ONLY`, it will be included in `source_tables` or `target_tables`.

Let's find where these tags are added.
I'll search for `NodeTag.SELFLOOP`, `NodeTag.SOURCE_ONLY`, `NodeTag.TARGET_ONLY`.
TOOL CALL · run_command
{
  "command": "grep -rn --include=\"*.py\" \"NodeTag\" sqllineage/core/"
}
Result of run_command 1,578 characters
{
  "status": "ok",
  "stdout": "sqllineage/core/holders.py:8:from sqllineage.utils.constant import EdgeType, NodeTag\nsqllineage/core/holders.py:65:        return self._property_getter(NodeTag.READ)\nsqllineage/core/holders.py:68:        self._property_setter(value, NodeTag.READ)\nsqllineage/core/holders.py:75:        return self._property_getter(NodeTag.WRITE)\nsqllineage/core/holders.py:78:        self._property_setter(value, NodeTag.WRITE)\nsqllineage/core/holders.py:82:        return self._property_getter(NodeTag.CTE)  # type: ignore\nsqllineage/core/holders.py:85:        self._property_setter(value, NodeTag.CTE)\nsqllineage/core/holders.py:126:        return self._property_getter(NodeTag.DROP)  # type: ignore\nsqllineage/core/holders.py:129:        self._property_setter(value, NodeTag.DROP)\nsqllineage/core/holders.py:157:        self._selfloop_tables = self.__retrieve_tag_tables(NodeTag.SELFLOOP)\nsqllineage/core/holders.py:158:        self._sourceonly_tables = self.__retrieve_tag_tables(NodeTag.SOURCE_ONLY)\nsqllineage/core/holders.py:159:        self._targetonly_tables = self.__retrieve_tag_tables(NodeTag.TARGET_ONLY)\nsqllineage/core/holders.py:215:        intermediate_tables -= self.__retrieve_tag_tables(NodeTag.SELFLOOP)\nsqllineage/core/holders.py:248:                    g.add_nodes_from(read, **{NodeTag.SOURCE_ONLY: True})\nsqllineage/core/holders.py:251:                    g.add_nodes_from(write, **{NodeTag.TARGET_ONLY: True})\nsqllineage/core/holders.py:258:            g.nodes[table][NodeTag.SELFLOOP] = True\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 880 tokens · stopped: STOP
`Column` does not inherit from `Table` or `Path`. Wait, look at `sqllineage/core/holders.py` again: ```python @property def table_lineage_graph(self) -> DiGraph: """ The table level DiGraph held by SQLLineageHolder """ table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)] return self.graph.subgraph(table_nodes) ``` If `Column` is not in `DATASET_CLASSES`, then `table_nodes` should only contain `Table` and `Path` instances. Wait, look at the reproduction output again: `Source Tables: [Table: <default>.foo, Column: <default>.foo.col]` Wait, if `sqllineage/runner.py` does this: ```python @lazy_property def source_tables(self) -> List[Table]: """ a list of source :class:`sqllineage.models.Table` """ return sorted(self._sql_holder.source_tables, key=lambda x: str(x)) ``` And `self._sql_holder.source_tables` returns a `Set[Table]`. If it contains a `Column` object, then `self._sql_holder.source_tables` must have it. Let's look at `sqllineage/core/holders.py`'s `source_tables` property again. ```python @property def source_tables(self) -> Set[Table]: """ a list of source :class:`sqllineage.models.Table` """ source_tables = { table for table, deg in self.table_lineage_graph.in_degree if deg == 0 }.intersection( {table for table, deg in self.table_lineage_graph.out_degree if deg > 0} ) source_tables |= self._selfloop_tables source_tables |= self._sourceonly_tables return source_tables ``` `source_tables` could be getting columns from `self._selfloop_tables` or `self._sourceonly_tables`. Let's see how these are initialized: ```python class SQLLineageHolder(ColumnLineageMixin): def __init__(self, graph: DiGraph): """ The combined lineage result in representation of Directed Acyclic Graph. :param graph: the Directed Acyclic Graph holding all the combined lineage result. """ self.graph = graph self._selfloop_tables = self.__retrieve_tag_tables(NodeTag.SELFLOOP) self._sourceonly_tables = self.__retrieve_tag_tables(NodeTag.SOURCE_ONLY) self._targetonly_tables = self.__retrieve_tag_tables(NodeTag.TARGET_ONLY) ``` And `__retrieve_tag_tables`: ```python def __retrieve_tag_tables(self, tag) -> Set[Table]: return { table for table, attr in self.graph.nodes(data=True) if attr.get(tag) is True } ``` So if a `Column` node in `self.graph` has the tag `NodeTag.SELFLOOP`, `NodeTag.SOURCE_ONLY`, or `NodeTag.TARGET_ONLY`, it will be included in `source_tables` or `target_tables`. Let's find where these tags are added. I'll search for `NodeTag.SELFLOOP`, `NodeTag.SOURCE_ONLY`, `NodeTag.TARGET_ONLY`. <channel|><|tool_call>call:run_command{command:<|"|>grep -rn --include="*.py" "NodeTag" sqllineage/core/<|"|>}<tool_call|><|tool_response>
Turn 9at 173 s101 tokens out12,875 prompt tokens
Wait, `sqllineage/core/holders.py:248`, `251`, `258` look promising. Let's examine the `SQLLineageHolder`'s methods.

I'll read the end of `sqllineage/core/holders.py`.
TOOL CALL · read_file
{
  "filepath": "sqllineage/core/holders.py",
  "start_line": 200
}
Result of read_file 3,929 characters
{
  "status": "ok",
  "filepath": "sqllineage/core/holders.py",
  "content": "        )\n        target_tables |= self._selfloop_tables\n        target_tables |= self._targetonly_tables\n        return target_tables\n\n    @property\n    def intermediate_tables(self) -> Set[Table]:\n        \"\"\"\n        a list of intermediate :class:`sqllineage.models.Table`\n        \"\"\"\n        intermediate_tables = {\n            table for table, deg in self.table_lineage_graph.in_degree if deg > 0\n        }.intersection(\n            {table for table, deg in self.table_lineage_graph.out_degree if deg > 0}\n        )\n        intermediate_tables -= self.__retrieve_tag_tables(NodeTag.SELFLOOP)\n        return intermediate_tables\n\n    def __retrieve_tag_tables(self, tag) -> Set[Table]:\n        return {\n            table\n            for table, attr in self.graph.nodes(data=True)\n            if attr.get(tag) is True\n        }\n\n    @staticmethod\n    def of(*args: StatementLineageHolder):\n        \"\"\"\n        To assemble multiple :class:`sqllineage.holders.StatementLineageHolder` into\n        :class:`sqllineage.holders.SQLLineageHolder`\n        \"\"\"\n        g = DiGraph()\n        for holder in args:\n            g = nx.compose(g, holder.graph)\n            if holder.drop:\n                for table in holder.drop:\n                    if g.has_node(table) and g.degree[table] == 0:\n                        g.remove_node(table)\n            elif holder.rename:\n                for (table_old, table_new) in holder.rename:\n                    g = nx.relabel_nodes(g, {table_old: table_new})\n                    g.remove_edge(table_new, table_new)\n                    if g.degree[table_new] == 0:\n                        g.remove_node(table_new)\n            else:\n                read, write = holder.read, holder.write\n                if len(read) > 0 and len(write) == 0:\n                    # source only table comes from SELECT statement\n                    g.add_nodes_from(read, **{NodeTag.SOURCE_ONLY: True})\n                elif len(read) == 0 and len(write) > 0:\n                    # target only table comes from case like: 1) INSERT/UPDATE constant values; 2) CREATE TABLE\n                    g.add_nodes_from(write, **{NodeTag.TARGET_ONLY: True})\n                else:\n                    g.add_nodes_from(read)\n                    g.add_nodes_from(write)\n                    for source, target in itertools.product(read, write):\n                        g.add_edge(source, target, type=EdgeType.LINEAGE)\n        for table in {e[0] for e in nx.selfloop_edges(g)}:\n            g.nodes[table][NodeTag.SELFLOOP] = True\n        # find all the columns that we can't assign accurately to a parent table (with multiple parent candidates)\n        unresolved_cols = [\n            (s, t)\n            for s, t in g.edges\n            if isinstance(s, Column) and len(s.parent_candidates) > 1\n        ]\n        for unresolved_col, tgt_col in unresolved_cols:\n            # check if there's only one parent candidate contains the column with same name\n            src_cols = []\n            for parent in unresolved_col.parent_candidates:\n                src_col = Column(unresolved_col.raw_name)\n                src_col.parent = parent\n                if g.has_edge(parent, src_col):\n                    src_cols.append(src_col)\n            if len(src_cols) == 1:\n                g.add_edge(src_cols[0], tgt_col, type=EdgeType.LINEAGE)\n                g.remove_edge(unresolved_col, tgt_col)\n        # when unresolved column got resolved, it will be orphan node, and we can remove it\n        for node in [n for n, deg in g.degree if deg == 0]:\n            if isinstance(node, Column) and len(node.parent_candidates) > 1:\n                g.remove_node(node)\n        return SQLLineageHolder(g)",
  "start_line": 200,
  "end_line": 280,
  "total_lines": 280,
  "is_truncated": false
}
Generated tokens 101 tokens · stopped: STOP
Wait, `sqllineage/core/holders.py:248`, `251`, `258` look promising. Let's examine the `SQLLineageHolder`'s methods. I'll read the end of `sqllineage/core/holders.py`. <channel|><|tool_call>call:read_file{filepath:<|"|>sqllineage/core/holders.py<|"|>,start_line:200}<tool_call|><|tool_response>
Turn 10at 298 s2,117 tokens out14,101 prompt tokens
I found the issue. In `SQLLineageHolder.of`:

```python
        for table in {e[0] for e in nx.selfloop_edges(g)}:
            g.nodes[table][NodeTag.SELFLOOP] = True
```

`nx.selfloop_edges(g)` returns edges where source and target are the same.
In the case of `INSERT OVERWRITE TABLE foo SELECT col FROM foo`, the graph might have a self-loop for the table `foo`. But if there is also a self-loop for a `Column`, then it will be tagged as `NodeTag.SELFLOOP`.

Wait, does `nx.selfloop_edges(g)` return columns too? Yes, because `g` contains both tables and columns.

And `__retrieve_tag_tables` just checks for the tag:

```python
    def __retrieve_tag_tables(self, tag) -> Set[Table]:
        return {
            table
            for table, attr in self.graph.nodes(data=True)
            if attr.get(tag) is True
        }
```

It doesn't check if the node is actually a `Table` (or `DATASET_CLASSES`).

So if a `Column` object is tagged as `NodeTag.SELFLOOP`, `NodeTag.SOURCE_ONLY`, or `NodeTag.TARGET_ONLY`, it will be included in `source_tables()` or `target_tables()`.

Let's check `SQLLineageHolder.of` again.
```python
                if len(read) > 0 and len(write) == 0:
                    # source only table comes from SELECT statement
                    g.add_nodes_from(read, **{NodeTag.SOURCE_ONLY: True})
                elif len(read) == 0 and len(write) > 0:
                    # target only table comes from case like: 1) INSERT/UPDATE constant values; 2) CREATE TABLE
                    g.add_nodes_from(write, **{NodeTag.TARGET_ONLY: True})
```
`read` and `write` come from `holder.read` and `holder.write`.
`StatementLineageHolder` (which inherits from `SubQueryLineageHolder`):
```python
    @property
    def read(self) -> Set[Union[SubQuery, Table]]:
        return self._property_getter(NodeTag.READ)

    def add_read(self, value) -> None:
        self._property_setter(value, NodeTag.READ)
```
And `SubQueryLineageHolder`'s `_property_setter`:
```python
    def _property_setter(self, value, prop) -> None:
        self.graph.add_node(value, **{prop: True})
```
If `value` is a `Column`, it will be tagged with `NodeTag.READ`.

Wait, `read` and `write` should only contain `Table` or `SubQuery`.

But let's look at `__retrieve_tag_tables` again. It's used by `source_tables`, `target_tables`, and `intermediate_tables`.

```python
    def __retrieve_tag_tables(self, tag) -> Set[Table]:
        return {
            table
            for table, attr in self.graph.nodes(data=True)
            if attr.get(tag) is True
        }
```

The easiest and most robust fix is to ensure that `__retrieve_tag_tables` only returns nodes that are instances of `DATASET_CLASSES`.

Let's verify if `DATASET_CLASSES` is available in `SQLLineageHolder`'s scope. Yes, it's defined at the module level of `sqllineage/core/holders.py`.

```python
DATASET_CLASSES = (Path, Table)
```

So I should change:
```python
    def __retrieve_tag_tables(self, tag) -> Set[Table]:
        return {
            table
            for table, attr in self.graph.nodes(data=True)
            if attr.get(tag) is True
        }
```
to:
```python
    def __retrieve_tag_tables(self, tag) -> Set[Table]:
        return {
            table
            for table, attr in self.graph.nodes(data=True)
            if isinstance(table, DATASET_CLASSES) and attr.get(tag) is True
        }
```

Let's double check if any other tag retrieval needs this.
`source_tables`, `target_tables`, and `intermediate_tables` all use `__retrieve_tag_tables`.

Is it possible that `DATASET_CLASSES` should include something else?
`DATASET_CLASSES = (Path, Table)`.
`SubQuery` is not in it.
Should `SubQuery` be in it?
In `SQLLineageHolder.of`:
```python
                read, write = holder.read, holder.write
                if len(read) > 0 and len(write) == 0:
                    # source only table comes from SELECT statement
                    g.add_nodes_from(read, **{NodeTag.SOURCE_ONLY: True})
```
`read` can contain `SubQuery` (as seen in `SubQueryLineageHolder.read` type hint `Set[Union[SubQuery, Table]]`).

Wait, if `SubQuery` is tagged as `SOURCE_ONLY`, but not in `DATASET_CLASSES`, it will be filtered out of `source_tables`. Is that desired?
The return type of `source_tables` is `Set[Table]`. `SubQuery` is not a `Table`.

Let's look at `sqllineage/core/models.py` again. `SubQuery`, `Table`, `Path` are all different classes.

If `source_tables` is supposed to return only "tables", then `SubQuery` should not be in it.

Let's check if `SubQuery` ever appears in `source_tables` in normal operation.
Probably not, as a `SubQuery` is usually an internal node in the lineage graph, not a leaf source table.

However, `DATASET_CLASSES` was used in `table_lineage_graph`:
```python
    @property
    def table_lineage_graph(self) -> DiGraph:
        """
        The table level DiGraph held by SQLLineageHolder
        """
        table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)]
        return self.graph.subgraph(table_nodes)
```
This confirms that "table level" means `Path` and `Table`.

So adding `isinstance(table, DATASET_CLASSES)` to `__retrieve_tag_tables` is correct.

Wait, let me check `SQLLineageHolder.of` again.

```python
        for table in {e[0] for e in nx.selfloop_edges(g)}:
            g.nodes[table][NodeTag.SELFLOOP] = True
```

If `table` here is a `Column`, it gets tagged as `SELFLOOP`. Then `__retrieve_tag_tables(NodeTag.SELFLOOP)` returns it if we don't filter by `DATASET_CLASSES`.

Let's test this hypothesis.

I'll apply the fix and run the reproduction script.

Wait, let's see if there are other places where `__retrieve_tag_tables` is used.
Only in `source_tables`, `target_tables`, and `intermediate_tables`.

```python
    @property
    def source_tables(self) -> Set[Table]:
        # ...
        source_tables |= self._selfloop_tables
        source_tables |= self._sourceonly_tables
        return source_tables

    @property
    def target_tables(self) -> Set[Table]:
        # ...
        target_tables |= self._selfloop_tables
        target_tables |= self._targetonly_tables
        return target_tables

    @property
    def intermediate_tables(self) -> Set[Table]:
        # ...
        intermediate_tables -= self.__retrieve_tag_tables(NodeTag.SELFLOOP)
        return intermediate_tables
```

Yes, it seems that `__retrieve_tag_tables` is the central point for this.

Let's verify if `SubQuery` should be included in `DATASET_CLASSES` by checking if `SubQuery` is ever intended to be return as a "Source Table".
A `SubQuery` is usually a CTE or a nested query. In `sqllineage`, usually, source tables are the actual physical tables.

If I look at `sqllineage/core/models.py`, `SubQuery` is separate from `Table`.

Let's try to reproduce with a CTE to see if CTEs (SubQueries) appear in `source_tables`.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom sqllineage.runner import LineageRunner\n\nsql = \"WITH cte AS (SELECT 1 as col) SELECT col FROM cte\"\nrunner = LineageRunner(sql)\nprint(f\"Source Tables: {runner.source_tables}\")\nprint(f\"Target Tables: {runner.target_tables}\")\nPY\n"
}
Result of run_command 98 characters
{
  "status": "ok",
  "stdout": "Source Tables: []\nTarget Tables: []\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 2,117 tokens · stopped: STOP
I found the issue. In `SQLLineageHolder.of`: ```python for table in {e[0] for e in nx.selfloop_edges(g)}: g.nodes[table][NodeTag.SELFLOOP] = True ``` `nx.selfloop_edges(g)` returns edges where source and target are the same. In the case of `INSERT OVERWRITE TABLE foo SELECT col FROM foo`, the graph might have a self-loop for the table `foo`. But if there is also a self-loop for a `Column`, then it will be tagged as `NodeTag.SELFLOOP`. Wait, does `nx.selfloop_edges(g)` return columns too? Yes, because `g` contains both tables and columns. And `__retrieve_tag_tables` just checks for the tag: ```python def __retrieve_tag_tables(self, tag) -> Set[Table]: return { table for table, attr in self.graph.nodes(data=True) if attr.get(tag) is True } ``` It doesn't check if the node is actually a `Table` (or `DATASET_CLASSES`). So if a `Column` object is tagged as `NodeTag.SELFLOOP`, `NodeTag.SOURCE_ONLY`, or `NodeTag.TARGET_ONLY`, it will be included in `source_tables()` or `target_tables()`. Let's check `SQLLineageHolder.of` again. ```python if len(read) > 0 and len(write) == 0: # source only table comes from SELECT statement g.add_nodes_from(read, **{NodeTag.SOURCE_ONLY: True}) elif len(read) == 0 and len(write) > 0: # target only table comes from case like: 1) INSERT/UPDATE constant values; 2) CREATE TABLE g.add_nodes_from(write, **{NodeTag.TARGET_ONLY: True}) ``` `read` and `write` come from `holder.read` and `holder.write`. `StatementLineageHolder` (which inherits from `SubQueryLineageHolder`): ```python @property def read(self) -> Set[Union[SubQuery, Table]]: return self._property_getter(NodeTag.READ) def add_read(self, value) -> None: self._property_setter(value, NodeTag.READ) ``` And `SubQueryLineageHolder`'s `_property_setter`: ```python def _property_setter(self, value, prop) -> None: self.graph.add_node(value, **{prop: True}) ``` If `value` is a `Column`, it will be tagged with `NodeTag.READ`. Wait, `read` and `write` should only contain `Table` or `SubQuery`. But let's look at `__retrieve_tag_tables` again. It's used by `source_tables`, `target_tables`, and `intermediate_tables`. ```python def __retrieve_tag_tables(self, tag) -> Set[Table]: return { table for table, attr in self.graph.nodes(data=True) if attr.get(tag) is True } ``` The easiest and most robust fix is to ensure that `__retrieve_tag_tables` only returns nodes that are instances of `DATASET_CLASSES`. Let's verify if `DATASET_CLASSES` is available in `SQLLineageHolder`'s scope. Yes, it's defined at the module level of `sqllineage/core/holders.py`. ```python DATASET_CLASSES = (Path, Table) ``` So I should change: ```python def __retrieve_tag_tables(self, tag) -> Set[Table]: return { table for table, attr in self.graph.nodes(data=True) if attr.get(tag) is True } ``` to: ```python def __retrieve_tag_tables(self, tag) -> Set[Table]: return { table for table, attr in self.graph.nodes(data=True) if isinstance(table, DATASET_CLASSES) and attr.get(tag) is True } ``` Let's double check if any other tag retrieval needs this. `source_tables`, `target_tables`, and `intermediate_tables` all use `__retrieve_tag_tables`. Is it possible that `DATASET_CLASSES` should include something else? `DATASET_CLASSES = (Path, Table)`. `SubQuery` is not in it. Should `SubQuery` be in it? In `SQLLineageHolder.of`: ```python read, write = holder.read, holder.write if len(read) > 0 and len(write) == 0: # source only table comes from SELECT statement g.add_nodes_from(read, **{NodeTag.SOURCE_ONLY: True}) ``` `read` can contain `SubQuery` (as seen in `SubQueryLineageHolder.read` type hint `Set[Union[SubQuery, Table]]`). Wait, if `SubQuery` is tagged as `SOURCE_ONLY`, but not in `DATASET_CLASSES`, it will be filtered out of `source_tables`. Is that desired? The return type of `source_tables` is `Set[Table]`. `SubQuery` is not a `Table`. Let's look at `sqllineage/core/models.py` again. `SubQuery`, `Table`, `Path` are all different classes. If `source_tables` is supposed to return only "tables", then `SubQuery` should not be in it. Let's check if `SubQuery` ever appears in `source_tables` in normal operation. Probably not, as a `SubQuery` is usually an internal node in the lineage graph, not a leaf source table. However, `DATASET_CLASSES` was used in `table_lineage_graph`: ```python @property def table_lineage_graph(self) -> DiGraph: """ The table level DiGraph held by SQLLineageHolder """ table_nodes = [n for n in self.graph.nodes if isinstance(n, DATASET_CLASSES)] return self.graph.subgraph(table_nodes) ``` This confirms that "table level" means `Path` and `Table`. So adding `isinstance(table, DATASET_CLASSES)` to `__retrieve_tag_tables` is correct. Wait, let me check `SQLLineageHolder.of` again. ```python for table in {e[0] for e in nx.selfloop_edges(g)}: g.nodes[table][NodeTag.SELFLOOP] = True ``` If `table` here is a `Column`, it gets tagged as `SELFLOOP`. Then `__retrieve_tag_tables(NodeTag.SELFLOOP)` returns it if we don't filter by `DATASET_CLASSES`. Let's test this hypothesis. I'll apply the fix and run the reproduction script. Wait, let's see if there are other places where `__retrieve_tag_tables` is used. Only in `source_tables`, `target_tables`, and `intermediate_tables`. ```python @property def source_tables(self) -> Set[Table]: # ... source_tables |= self._selfloop_tables source_tables |= self._sourceonly_tables return source_tables @property def target_tables(self) -> Set[Table]: # ... target_tables |= self._selfloop_tables target_tables |= self._targetonly_tables return target_tables @property def intermediate_tables(self) -> Set[Table]: # ... intermediate_tables -= self.__retrieve_tag_tables(NodeTag.SELFLOOP) return intermediate_tables ``` Yes, it seems that `__retrieve_tag_tables` is the central point for this. Let's verify if `SubQuery` should be included in `DATASET_CLASSES` by checking if `SubQuery` is ever intended to be return as a "Source Table". A `SubQuery` is usually a CTE or a nested query. In `sqllineage`, usually, source tables are the actual physical tables. If I look at `sqllineage/core/models.py`, `SubQuery` is separate from `Table`. Let's try to reproduce with a CTE to see if CTEs (SubQueries) appear in `source_tables`. <channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from sqllineage.runner import LineageRunner sql = "WITH cte AS (SELECT 1 as col) SELECT col FROM cte" runner = LineageRunner(sql) print(f"Source Tables: {runner.source_tables}") print(f"Target Tables: {runner.target_tables}") PY <|"|>}<tool_call|><|tool_response>
Turn 11at 304 s111 tokens out16,268 prompt tokens
Okay, so CTEs don't appear as source tables.

What about a simple `SELECT * FROM foo`?
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom sqllineage.runner import LineageRunner\n\nsql = \"SELECT * FROM foo\"\nrunner = LineageRunner(sql)\nprint(f\"Source Tables: {runner.source_tables}\")\nprint(f\"Target Tables: {runner.target_tables}\")\nPY\n"
}
Result of run_command 118 characters
{
  "status": "ok",
  "stdout": "Source Tables: [Table: <default>.foo]\nTarget Tables: []\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 111 tokens · stopped: STOP
Okay, so CTEs don't appear as source tables. What about a simple `SELECT * FROM foo`? <channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from sqllineage.runner import LineageRunner sql = "SELECT * FROM foo" runner = LineageRunner(sql) print(f"Source Tables: {runner.source_tables}") print(f"Target Tables: {runner.target_tables}") PY <|"|>}<tool_call|><|tool_response>
Turn 12at 377 s110 tokens out5,969 prompt tokens
Now let's try the problematic case: `INSERT OVERWRITE TABLE foo SELECT col FROM foo`.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom sqllineage.runner import LineageRunner\n\nsql = \"INSERT OVERWRITE TABLE foo SELECT col FROM foo\"\nrunner = LineageRunner(sql)\nprint(f\"Source Tables: {runner.source_tables}\")\nprint(f\"Target Tables: {runner.target_tables}\")\nPY\n"
}
Result of run_command 192 characters
{
  "status": "ok",
  "stdout": "Source Tables: [Table: <default>.foo, Column: <default>.foo.col]\nTarget Tables: [Table: <default>.foo, Column: <default>.foo.col]\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 110 tokens · stopped: STOP
Now let's try the problematic case: `INSERT OVERWRITE TABLE foo SELECT col FROM foo`.<channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from sqllineage.runner import LineageRunner sql = "INSERT OVERWRITE TABLE foo SELECT col FROM foo" runner = LineageRunner(sql) print(f"Source Tables: {runner.source_tables}") print(f"Target Tables: {runner.target_tables}") PY <|"|>}<tool_call|><|tool_response>
Turn 13at 409 s481 tokens out6,160 prompt tokens
Confirmed. `Column: <default>.foo.col` is appearing in both.

Now I will apply the fix.

Wait, one more thing. `intermediate_tables` also uses `__retrieve_tag_tables`.
```python
    @property
    def intermediate_tables(self) -> Set[Table]:
        """
        a list of intermediate :class:`sqllineage.models.Table`
        """
        intermediate_tables = {
            table for table, deg in self.table_lineage_graph.in_degree if deg > 0
        }.intersection(
            {table for table, deg in self.table_lineage_graph.out_degree if deg > 0}
        )
        intermediate_tables -= self.__retrieve_tag_tables(NodeTag.SELFLOOP)
        return intermediate_tables
```
`table_lineage_graph` only contains `DATASET_CLASSES`. So `intermediate_tables` (before the subtraction) already only contains `DATASET_CLASSES`.
Subtracting `__retrieve_tag_tables(NodeTag.SELFLOOP)` where the latter might contain `Column` wouldn't affect `intermediate_tables` if `Column` isn't in it anyway.

However, for consistency and correctness of `__retrieve_tag_tables` (especially given its name and return type hint `Set[Table]`), it should only return `Table` (and `Path`).

Applying the fix now.
TOOL CALL · edit_file
{
  "filepath": "sqllineage/core/holders.py",
  "new_string": "    def __retrieve_tag_tables(self, tag) -> Set[Table]:\n        return {\n            table\n            for table, attr in self.graph.nodes(data=True)\n            if isinstance(table, DATASET_CLASSES) and attr.get(tag) is True\n        }",
  "old_string": "    def __retrieve_tag_tables(self, tag) -> Set[Table]:\n        return {\n            table\n            for table, attr in self.graph.nodes(data=True)\n            if attr.get(tag) is True\n        }"
}
Result of edit_file 473 characters
{
  "status": "ok",
  "filepath": "sqllineage/core/holders.py",
  "occurrences": 1,
  "strategy": "exact",
  "diff": "--- a/sqllineage/core/holders.py\n+++ b/sqllineage/core/holders.py\n@@ -219,7 +219,7 @@\n         return {\n             table\n             for table, attr in self.graph.nodes(data=True)\n-            if attr.get(tag) is True\n+            if isinstance(table, DATASET_CLASSES) and attr.get(tag) is True\n         }\n \n     @staticmethod\n",
  "is_truncated": false
}
Generated tokens 481 tokens · stopped: STOP
Confirmed. `Column: <default>.foo.col` is appearing in both. Now I will apply the fix. Wait, one more thing. `intermediate_tables` also uses `__retrieve_tag_tables`. ```python @property def intermediate_tables(self) -> Set[Table]: """ a list of intermediate :class:`sqllineage.models.Table` """ intermediate_tables = { table for table, deg in self.table_lineage_graph.in_degree if deg > 0 }.intersection( {table for table, deg in self.table_lineage_graph.out_degree if deg > 0} ) intermediate_tables -= self.__retrieve_tag_tables(NodeTag.SELFLOOP) return intermediate_tables ``` `table_lineage_graph` only contains `DATASET_CLASSES`. So `intermediate_tables` (before the subtraction) already only contains `DATASET_CLASSES`. Subtracting `__retrieve_tag_tables(NodeTag.SELFLOOP)` where the latter might contain `Column` wouldn't affect `intermediate_tables` if `Column` isn't in it anyway. However, for consistency and correctness of `__retrieve_tag_tables` (especially given its name and return type hint `Set[Table]`), it should only return `Table` (and `Path`). Applying the fix now.<channel|><|tool_call>call:edit_file{filepath:<|"|>sqllineage/core/holders.py<|"|>,new_string:<|"|> def __retrieve_tag_tables(self, tag) -> Set[Table]: return { table for table, attr in self.graph.nodes(data=True) if isinstance(table, DATASET_CLASSES) and attr.get(tag) is True }<|"|>,old_string:<|"|> def __retrieve_tag_tables(self, tag) -> Set[Table]: return { table for table, attr in self.graph.nodes(data=True) if attr.get(tag) is True }<|"|>}<tool_call|><|tool_response>
Turn 14at 421 s212 tokens out6,820 prompt tokens
Now let's verify the fix with the reproduction script.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom sqllineage.runner import LineageRunner\n\nsql = \"INSERT OVERWRITE TABLE foo SELECT col FROM foo\"\nrunner = LineageRunner(sql)\nprint(f\"Source Tables: {runner.source_tables}\")\nprint(f\"Target Tables: {runner.target_tables}\")\n\n# Also check if any other cases are broken\nsql2 = \"SELECT * FROM foo\"\nrunner2 = LineageRunner(sql2)\nprint(f\"Case 2 Source: {runner2.source_tables}\")\n\nsql3 = \"INSERT INTO foo SELECT * FROM bar\"\nrunner3 = LineageRunner(sql3)\nprint(f\"Case 3 Source: {runner3.source_tables}\")\nprint(f\"Case 3 Target: {runner3.target_tables}\")\nPY\n"
}
Result of run_command 255 characters
{
  "status": "ok",
  "stdout": "Source Tables: [Table: <default>.foo]\nTarget Tables: [Table: <default>.foo]\nCase 2 Source: [Table: <default>.foo]\nCase 3 Source: [Table: <default>.bar]\nCase 3 Target: [Table: <default>.foo]\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 212 tokens · stopped: STOP
Now let's verify the fix with the reproduction script. <channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from sqllineage.runner import LineageRunner sql = "INSERT OVERWRITE TABLE foo SELECT col FROM foo" runner = LineageRunner(sql) print(f"Source Tables: {runner.source_tables}") print(f"Target Tables: {runner.target_tables}") # Also check if any other cases are broken sql2 = "SELECT * FROM foo" runner2 = LineageRunner(sql2) print(f"Case 2 Source: {runner2.source_tables}") sql3 = "INSERT INTO foo SELECT * FROM bar" runner3 = LineageRunner(sql3) print(f"Case 3 Source: {runner3.source_tables}") print(f"Case 3 Target: {runner3.target_tables}") PY <|"|>}<tool_call|><|tool_response>
Turn 15at 432 s160 tokens out7,136 prompt tokens
The fix worked for the reported issue.

Let's check if there are any other tags that might be used to retrieve tables.
`NodeTag.SOURCE_ONLY`, `NodeTag.TARGET_ONLY`, `NodeTag.SELFLOOP`.
These are all used through `__retrieve_tag_tables`.

Are there any other tags used in `SQLLineageHolder`?
I'll check `sqllineage/core/holders.py` and `sqllineage/core/models.py` for `NodeTag`.
TOOL CALL · run_command
{
  "command": "grep -rn \"NodeTag\" sqllineage/core/holders.py sqllineage/core/models.py"
}
Result of run_command 1,578 characters
{
  "status": "ok",
  "stdout": "sqllineage/core/holders.py:8:from sqllineage.utils.constant import EdgeType, NodeTag\nsqllineage/core/holders.py:65:        return self._property_getter(NodeTag.READ)\nsqllineage/core/holders.py:68:        self._property_setter(value, NodeTag.READ)\nsqllineage/core/holders.py:75:        return self._property_getter(NodeTag.WRITE)\nsqllineage/core/holders.py:78:        self._property_setter(value, NodeTag.WRITE)\nsqllineage/core/holders.py:82:        return self._property_getter(NodeTag.CTE)  # type: ignore\nsqllineage/core/holders.py:85:        self._property_setter(value, NodeTag.CTE)\nsqllineage/core/holders.py:126:        return self._property_getter(NodeTag.DROP)  # type: ignore\nsqllineage/core/holders.py:129:        self._property_setter(value, NodeTag.DROP)\nsqllineage/core/holders.py:157:        self._selfloop_tables = self.__retrieve_tag_tables(NodeTag.SELFLOOP)\nsqllineage/core/holders.py:158:        self._sourceonly_tables = self.__retrieve_tag_tables(NodeTag.SOURCE_ONLY)\nsqllineage/core/holders.py:159:        self._targetonly_tables = self.__retrieve_tag_tables(NodeTag.TARGET_ONLY)\nsqllineage/core/holders.py:215:        intermediate_tables -= self.__retrieve_tag_tables(NodeTag.SELFLOOP)\nsqllineage/core/holders.py:248:                    g.add_nodes_from(read, **{NodeTag.SOURCE_ONLY: True})\nsqllineage/core/holders.py:251:                    g.add_nodes_from(write, **{NodeTag.TARGET_ONLY: True})\nsqllineage/core/holders.py:258:            g.nodes[table][NodeTag.SELFLOOP] = True\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 160 tokens · stopped: STOP
The fix worked for the reported issue. Let's check if there are any other tags that might be used to retrieve tables. `NodeTag.SOURCE_ONLY`, `NodeTag.TARGET_ONLY`, `NodeTag.SELFLOOP`. These are all used through `__retrieve_tag_tables`. Are there any other tags used in `SQLLineageHolder`? I'll check `sqllineage/core/holders.py` and `sqllineage/core/models.py` for `NodeTag`. <channel|><|tool_call>call:run_command{command:<|"|>grep -rn "NodeTag" sqllineage/core/holders.py sqllineage/core/models.py<|"|>}<tool_call|><|tool_response>
Turn 16at 467 s603 tokens out7,868 prompt tokens
The tags used in `__retrieve_tag_tables` are `SELFLOOP`, `SOURCE_ONLY`, and `TARGET_ONLY`. All of these are now filtered by `DATASET_CLASSES`.

Wait, what about `READ`, `WRITE`, `CTE`, `DROP`?
These are used via `_property_getter` and `_property_setter`.

```python
    def _property_getter(self, prop) -> Set[Union[SubQuery, Table]]:
        return {
            node
            for node, attr in self.graph.nodes(data=True)
            if attr.get(prop) is True
        }
```

Wait, `_property_getter` does NOT filter by `DATASET_CLASSES`!

If `NodeTag.READ` is used to find "read" nodes, it might contain `Column` objects too if they were tagged as `READ`.

Wait, let's check `SubQueryLineageHolder`.
```python
    @property
    def read(self) -> Set[Union[SubQuery, Table]]:
        return self._property_getter(NodeTag.READ)
```

But `SQLLineageHolder`'s `source_tables` doesn't use `_property_getter(NodeTag.READ)`. Instead, it uses:

```python
    @property
    def source_tables(self) -> Set[Table]:
        """
        a list of source :class:`sqllineage.models.Table`
        """
        source_tables = {
            table
            for table, deg in self.table_lineage_graph.in_degree if deg == 0
        }
        source_tables |= self._selfloop_tables
        source_tables |= self._sourceonly_tables
        return source_tables
```

The `table_lineage_graph` is already filtered by `DATASET_CLASSES`.
And `_selfloop_tables` and `_sourceonly_tables` now are also filtered by `DATASET_CLASSES` via `__retrieve_tag_tables`.

So `source_tables` and `target_tables` are now strictly returning `Table` (and `Path`) objects.

What about other properties of `SQLLineageHolder`?
It doesn't seem to have other properties that return tables.

Are there any other classes that use `_property_getter`?
`StatementLineageHolder` and `SubQueryLineageHolder` (which inherit from `BaseLineageHolder`).

Let's look at `sqllineage/core/holders.py` from the beginning to be sure.
TOOL CALL · read_file
{
  "filepath": "sqllineage/core/holders.py"
}
Result of read_file 5,712 characters
{
  "status": "ok",
  "filepath": "sqllineage/core/holders.py",
  "content": "import itertools\nfrom typing import Set, Tuple, Union\n\nimport networkx as nx\nfrom networkx import DiGraph\n\nfrom sqllineage.core.models import Column, Path, SubQuery, Table\nfrom sqllineage.utils.constant import EdgeType, NodeTag\n\nDATASET_CLASSES = (Path, Table)\n\n\nclass ColumnLineageMixin:\n    def get_column_lineage(self, exclude_subquery=True) -> Set[Tuple[Column, ...]]:\n        self.graph: DiGraph  # For mypy attribute checking\n        # filter all the column node in the graph\n        column_nodes = [n for n in self.graph.nodes if isinstance(n, Column)]\n        column_graph = self.graph.subgraph(column_nodes)\n        source_columns = {column for column, deg in column_graph.in_degree if deg == 0}\n        # if a column lineage path ends at SubQuery, then it should be pruned\n        target_columns = {\n            node\n            for node, deg in column_graph.out_degree\n            if isinstance(node, Column) and deg == 0\n        }\n        if exclude_subquery:\n            target_columns = {\n                node for node in target_columns if isinstance(node.parent, Table)\n            }\n        columns = set()\n        for (source, target) in itertools.product(source_columns, target_columns):\n            simple_paths = list(nx.all_simple_paths(self.graph, source, target))\n            if len(simple_paths) == 1:\n                columns.add(tuple(simple_paths[0]))\n            # we can ignore when simple path doesn't exist, but could there be more than one simple path?\n        return columns\n\n\nclass SubQueryLineageHolder(ColumnLineageMixin):\n    \"\"\"\n    SubQuery/Query Level Lineage Result.\n\n    SubQueryLineageHolder will hold attributes like read, write, cte\n\n    Each of them is a Set[:class:`sqllineage.models.Table`].\n\n    This is the most atomic representation of lineage result.\n    \"\"\"\n\n    def __init__(self) -> None:\n        self.graph = nx.DiGraph()\n\n    def __or__(self, other):\n        self.graph = nx.compose(self.graph, other.graph)\n        return self\n\n    def _property_getter(self, prop) -> Set[Union[SubQuery, Table]]:\n        return {t for t, attr in self.graph.nodes(data=True) if attr.get(prop) is True}\n\n    def _property_setter(self, value, prop) -> None:\n        self.graph.add_node(value, **{prop: True})\n\n    @property\n    def read(self) -> Set[Union[SubQuery, Table]]:\n        return self._property_getter(NodeTag.READ)\n\n    def add_read(self, value) -> None:\n        self._property_setter(value, NodeTag.READ)\n        # the same table can be added (in SQL: joined) multiple times with different alias\n        if hasattr(value, \"alias\"):\n            self.graph.add_edge(value, value.alias, type=EdgeType.HAS_ALIAS)\n\n    @property\n    def write(self) -> Set[Union[SubQuery, Table]]:\n        return self._property_getter(NodeTag.WRITE)\n\n    def add_write(self, value) -> None:\n        self._property_setter(value, NodeTag.WRITE)\n\n    @property\n    def cte(self) -> Set[SubQuery]:\n        return self._property_getter(NodeTag.CTE)  # type: ignore\n\n    def add_cte(self, value) -> None:\n        self._property_setter(value, NodeTag.CTE)\n\n    def add_column_lineage(self, src: Column, tgt: Column) -> None:\n        self.graph.add_edge(src, tgt, type=EdgeType.LINEAGE)\n        self.graph.add_edge(tgt.parent, tgt, type=EdgeType.HAS_COLUMN)\n        if src.parent is not None:\n            # starting NetworkX v2.6, None is not allowed as node, see https://github.com/networkx/networkx/pull/4892\n            self.graph.add_edge(src.parent, src, type=EdgeType.HAS_COLUMN)\n\n\nclass StatementLineageHolder(SubQueryLineageHolder, ColumnLineageMixin):\n    \"\"\"\n    Statement Level Lineage Result.\n\n    Based on SubQueryLineageHolder, StatementLineageHolder holds extra attributes like drop and rename\n\n    For drop, it is a Set[:class:`sqllineage.models.Table`].\n\n    For rename, it a Set[Tuple[:class:`sqllineage.models.Table`, :class:`sqllineage.models.Table`]], with the first\n    table being original table before renaming and the latter after renaming.\n    \"\"\"\n\n    def __str__(self):\n        return \"\\n\".join(\n            f\"table {attr}: {sorted(getattr(self, attr), key=lambda x: str(x)) if getattr(self, attr) else '[]'}\"\n            for attr in [\"read\", \"write\", \"cte\", \"drop\", \"rename\"]\n        )\n\n    def __repr__(self):\n        return str(self)\n\n    @property\n    def read(self) -> Set[Table]:  # type: ignore\n        return {t for t in super().read if isinstance(t, DATASET_CLASSES)}\n\n    @property\n    def write(self) -> Set[Table]:  # type: ignore\n        return {t for t in super().write if isinstance(t, DATASET_CLASSES)}\n\n    @property\n    def drop(self) -> Set[Table]:\n        return self._property_getter(NodeTag.DROP)  # type: ignore\n\n    def add_drop(self, value) -> None:\n        self._property_setter(value, NodeTag.DROP)\n\n    @property\n    def rename(self) -> Set[Tuple[Table, Table]]:\n        return {\n            (src, tgt)\n            for src, tgt, attr in self.graph.edges(data=True)\n            if attr.get(\"type\") == EdgeType.RENAME\n        }\n\n    def add_rename(self, src: Table, tgt: Table) -> None:\n        self.graph.add_edge(src, tgt, type=EdgeType.RENAME)\n\n    @staticmethod\n    def of(holder: SubQueryLineageHolder):\n        stmt_holder = StatementLineageHolder()\n        stmt_holder.graph = holder.graph\n        return stmt_holder\n\n\nclass SQLLineageHolder(ColumnLineageMixin):\n    def __init__(self, graph: DiGraph):",
  "start_line": 1,
  "end_line": 150,
  "total_lines": 280,
  "is_truncated": true
}
Generated tokens 603 tokens · stopped: STOP
The tags used in `__retrieve_tag_tables` are `SELFLOOP`, `SOURCE_ONLY`, and `TARGET_ONLY`. All of these are now filtered by `DATASET_CLASSES`. Wait, what about `READ`, `WRITE`, `CTE`, `DROP`? These are used via `_property_getter` and `_property_setter`. ```python def _property_getter(self, prop) -> Set[Union[SubQuery, Table]]: return { node for node, attr in self.graph.nodes(data=True) if attr.get(prop) is True } ``` Wait, `_property_getter` does NOT filter by `DATASET_CLASSES`! If `NodeTag.READ` is used to find "read" nodes, it might contain `Column` objects too if they were tagged as `READ`. Wait, let's check `SubQueryLineageHolder`. ```python @property def read(self) -> Set[Union[SubQuery, Table]]: return self._property_getter(NodeTag.READ) ``` But `SQLLineageHolder`'s `source_tables` doesn't use `_property_getter(NodeTag.READ)`. Instead, it uses: ```python @property def source_tables(self) -> Set[Table]: """ a list of source :class:`sqllineage.models.Table` """ source_tables = { table for table, deg in self.table_lineage_graph.in_degree if deg == 0 } source_tables |= self._selfloop_tables source_tables |= self._sourceonly_tables return source_tables ``` The `table_lineage_graph` is already filtered by `DATASET_CLASSES`. And `_selfloop_tables` and `_sourceonly_tables` now are also filtered by `DATASET_CLASSES` via `__retrieve_tag_tables`. So `source_tables` and `target_tables` are now strictly returning `Table` (and `Path`) objects. What about other properties of `SQLLineageHolder`? It doesn't seem to have other properties that return tables. Are there any other classes that use `_property_getter`? `StatementLineageHolder` and `SubQueryLineageHolder` (which inherit from `BaseLineageHolder`). Let's look at `sqllineage/core/holders.py` from the beginning to be sure.<channel|><|tool_call>call:read_file{filepath:<|"|>sqllineage/core/holders.py<|"|>}<tool_call|><|tool_response>

Patch, tests and logs

Final code change Included
diff --git a/sqllineage/core/holders.py b/sqllineage/core/holders.py
index d9ce561..ebbb442 100644
--- a/sqllineage/core/holders.py
+++ b/sqllineage/core/holders.py
@@ -219,7 +219,7 @@ class SQLLineageHolder(ColumnLineageMixin):
         return {
             table
             for table, attr in self.graph.nodes(data=True)
-            if attr.get(tag) is True
+            if isinstance(table, DATASET_CLASSES) and attr.get(tag) is True
         }
 
     @staticmethod
Test output Included
============================= test session starts ==============================
collected 11 items

tests/test_insert.py ...........                                         [100%]

==================================== PASSES ====================================
- generated xml file: /tmp/rebench-grade-19ba5c28860e4d66b6e1f481d6a293f3.xml --
=========================== short test summary info ============================
PASSED tests/test_insert.py::test_insert_into
PASSED tests/test_insert.py::test_insert_into_with_keyword_table
PASSED tests/test_insert.py::test_insert_into_with_columns
PASSED tests/test_insert.py::test_insert_into_with_columns_and_select
PASSED tests/test_insert.py::test_insert_into_with_columns_and_select_union
PASSED tests/test_insert.py::test_insert_into_partitions
PASSED tests/test_insert.py::test_insert_overwrite
PASSED tests/test_insert.py::test_insert_overwrite_with_keyword_table
PASSED tests/test_insert.py::test_insert_overwrite_values
PASSED tests/test_insert.py::test_insert_overwrite_from_self
PASSED tests/test_insert.py::test_insert_overwrite_from_self_with_join
============================== 11 passed in 0.49s ==============================
Test errors Included
Test report (JUnit) Included
<?xml version="1.0" encoding="utf-8"?><testsuites name="pytest tests"><testsuite name="pytest" errors="0" failures="0" skipped="0" tests="11" time="0.493" timestamp="2026-11-14T04:04:25.269870+00:00" hostname="12b2a8d7c859"><testcase classname="tests.test_insert" name="test_insert_into" time="0.005" /><testcase classname="tests.test_insert" name="test_insert_into_with_keyword_table" time="0.001" /><testcase classname="tests.test_insert" name="test_insert_into_with_columns" time="0.002" /><testcase classname="tests.test_insert" name="test_insert_into_with_columns_and_select" time="0.001" /><testcase classname="tests.test_insert" name="test_insert_into_with_columns_and_select_union" time="0.002" /><testcase classname="tests.test_insert" name="test_insert_into_partitions" time="0.001" /><testcase classname="tests.test_insert" name="test_insert_overwrite" time="0.001" /><testcase classname="tests.test_insert" name="test_insert_overwrite_with_keyword_table" time="0.001" /><testcase classname="tests.test_insert" name="test_insert_overwrite_values" time="0.001" /><testcase classname="tests.test_insert" name="test_insert_overwrite_from_self" time="0.001" /><testcase classname="tests.test_insert" name="test_insert_overwrite_from_self_with_join" time="0.002" /></testsuite></testsuites>
Agent log Included
  [   0.0s] 📋 System Prompt: You are a principal Python software engineer resolving a repository issue in `/workspace`.
  [   0.0s] 🎯 Task Prompt: You are evaluating a software engineering task for repository reata/sqllineage.
  [  19.1s] 💭 (751 chars) "The user is reporting a bug in `sqllineage` where column lineage is incorrectly displayed 
for self-dependent SQL stateme..."
  [  19.1s] 🔧 run_command (8 lines) python3 - <<'PY'
  [  19.8s]   → Source Tables: [Table: <default>.foo, Column: <default>.foo.col]
  [  34.0s] 💭 (541 chars) "Okay, the reproduction script confirms the issue. `Column: <default>.foo.col` is appearing 
in both source and target tab..."
  [  34.0s] 🔧 run_command grep -rn --include="*.py" "source_tables" sqllineage/core/
  [  34.0s]   → sqllineage/core/holders.py:178:    def source_tables(self) -> Set[Table]:
  [  38.4s] 💭 (155 chars) "`sqllineage/core/holders.py` seems relevant. Let's also check `sqllineage/core/analyzer.py`.
And `sqllineage/runner.py` ..."
  [  38.4s] 📖 read_file (sqllineage/runner.py)
  [  38.4s]   ✓ {'status': 'ok', 'filepath': 'sqllineage/runner.py', 'content': 'import logging\nfrom typing import 
Dict, List, Tuple\n\…
  [  46.0s] 💭 (222 chars) "`LineageRunner` creates a `_sql_holder` and uses its `source_tables`, `target_tables`, and 
`intermediate_tables` propert..."
  [  46.0s] 📖 read_file (sqllineage/core/holders.py)
  [  46.0s]   ✓ {'status': 'ok', 'filepath': 'sqllineage/core/holders.py', 'content': '\n    @property\n    def 
rename(self) -> Set[Tupl…
  [  62.9s] 💭 (712 chars) "The `source_tables` and `target_tables` properties in `SQLLineageHolder` use 
`self.table_lineage_graph`.

```python
    ..."
  [  62.9s] 📖 read_file (sqllineage/core/holders.py)
  [  63.0s]   ✓ {'status': 'ok', 'filepath': 'sqllineage/core/holders.py', 'content': 'import itertools\nfrom typing 
import Set, Tuple, …
  [  88.9s] 💭 (1445 chars) "`DATASET_CLASSES = (Path, Table)`. `Column` is NOT in `DATASET_CLASSES`.

So why is `Column: <default>.foo.col` appearin..."
  [  88.9s] 📖 read_file (sqllineage/core/models.py)
  [  89.0s]   ✓ {'status': 'ok', 'filepath': 'sqllineage/core/models.py', 'content': 'import warnings\nfrom typing 
import Dict, List, Op…
  [  95.8s] 💭 (70 chars) "Wait, I need to see the `Column` class in `sqllineage/core/models.py`."
  [  95.8s] 📖 read_file (sqllineage/core/models.py)
  [  95.9s]   ✓ {'status': 'ok', 'filepath': 'sqllineage/core/models.py', 'content': '\n    def __eq__(self, other):\n  
return typ…
  [ 148.2s] 💭 (2844 chars) "`Column` does not inherit from `Table` or `Path`.

Wait, look at `sqllineage/core/holders.py` again:
```python
    @prop..."
  [ 148.2s] 🔧 run_command grep -rn --include="*.py" "NodeTag" sqllineage/core/
  [ 148.3s]   → sqllineage/core/holders.py:8:from sqllineage.utils.constant import EdgeType, NodeTag
  [ 155.1s] 💭 (168 chars) "Wait, `sqllineage/core/holders.py:248`, `251`, `258` look promising. Let's examine the 
`SQLLineageHolder`'s methods.

I'..."
  [ 155.1s] 📖 read_file (sqllineage/core/holders.py)
  [ 155.1s]   ✓ {'status': 'ok', 'filepath': 'sqllineage/core/holders.py', 'content': '        )\n        target_tables 
|= self._selfloo…
  [ 280.7s] 💭 (6880 chars) "I found the issue. In `SQLLineageHolder.of`:

```python
        for table in {e[0] for e in nx.selfloop_edges(g)}:
     ..."
  [ 280.7s] 🔧 run_command (8 lines) python3 - <<'PY'
  [ 280.9s]   → Source Tables: []
  [ 285.8s] 💭 (86 chars) "Okay, so CTEs don't appear as source tables.

What about a simple `SELECT * FROM foo`?"
  [ 285.8s] 🔧 run_command (8 lines) python3 - <<'PY'
  [ 286.0s]   → Source Tables: [Table: <default>.foo]
  [ 359.3s] 💭 (85 chars) "Now let's try the problematic case: `INSERT OVERWRITE TABLE foo SELECT col FROM foo`."
  [ 359.3s] 🔧 run_command (8 lines) python3 - <<'PY'
  [ 359.5s]   → Source Tables: [Table: <default>.foo, Column: <default>.foo.col]
  [ 391.5s] 💭 (1185 chars) "Confirmed. `Column: <default>.foo.col` is appearing in both.

Now I will apply the fix.

Wait, one more thing. `intermed..."
  [ 391.5s] ✏️ edit_file (sqllineage/core/holders.py)
  [ 391.7s]   ✓ {'status': 'ok', 'filepath': 'sqllineage/core/holders.py', 'occurrences': 1, 'strategy': 'exact', 
'diff': '--- a/sqlline…
  [ 403.6s] 💭 (54 chars) "Now let's verify the fix with the reproduction script."
  [ 403.6s] 🔧 run_command (18 lines) python3 - <<'PY'
  [ 403.8s]   → Source Tables: [Table: <default>.foo]
  [ 414.4s] 💭 (377 chars) "The fix worked for the reported issue.

Let's check if there are any other tags that might be used to retrieve tables.
`..."
  [ 414.4s] 🔧 run_command grep -rn "NodeTag" sqllineage/core/holders.py sqllineage/core/models.py
  [ 414.4s]   → sqllineage/core/holders.py:8:from sqllineage.utils.constant import EdgeType, NodeTag
  [ 448.9s] 💭 (1977 chars) "The tags used in `__retrieve_tag_tables` are `SELFLOOP`, `SOURCE_ONLY`, and `TARGET_ONLY`. 
All of these are now filtered..."
  [ 448.9s] 📖 read_file (sqllineage/core/holders.py)
  [ 449.0s]   ✓ {'status': 'ok', 'filepath': 'sqllineage/core/holders.py', 'content': 'import itertools\nfrom typing 
import Set, Tuple, …
Native result row
{
  "agent_error": "Agent exceeded session timeout (7.5 min)",
  "duration_seconds": 471.69,
  "error": "Agent exceeded session timeout (7.5 min)",
  "grade": {
    "collected_tests": 11,
    "competition_junit_ok": true,
    "error": null,
    "required_issues_count": 0,
    "resolved": true,
    "status_counts": {
      "PASSED": 11
    },
    "strict_clean_patch": true,
    "test_exit_code": 0
  },
  "instance_id": "reata__sqllineage-224",
  "pass_idx": 0,
  "patch_chars": 473,
  "phase1_seconds": 470.11,
  "repo": "reata/sqllineage",
  "request_log_path": "/kaggle-root/working/r31/rollouts_X/requests/reata__sqllineage-224__p0__r3.jsonl",
  "resolved": true,
  "rollout_idx": 3,
  "run_key": "reata__sqllineage-224__p0__r3",
  "strict_clean_patch": true,
  "tool_calls": 16,
  "total_llm_calls": 16,
  "trace_path": "/kaggle-root/working/r31/rollouts_X/traces/trace_reata__sqllineage-224__p0__r3.json"
}