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ROLLOUT 5 · Aunsiels/pyformlang

Aunsiels__pyformlang-32

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455 stotal time
12tool calls
12model calls
6,678tokens generated
93,632prompt tokens read

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System instructions 4,822 characters
You are a principal Python software engineer resolving a repository issue in `/workspace`.
Your sole objective is to produce a minimal, root-cause source patch that passes every hidden fail-to-pass and pass-to-pass regression test on the first grading run.

## Critical Environment & Grader Rules
1. **Air-Gapped Sandbox & Available CLI Tools**: No network access. Never run `pip`, `uv`, `conda`, or `git fetch`. Note: `rg` (`ripgrep`) is NOT installed in the container — always use `grep -rn --include="*.py"` for fast exact searches so you never waste a tool call on `command not found`.
2. **Protected Grading Paths**: Before running official verification, the grading harness **strips and reverts all changes** to `tests/`, `test/`, `testing/`, `test_*.py`, `*_test.py`, `conftest.py`, `pyproject.toml`, `setup.cfg`, `pytest.ini`, and `tox.ini`. Every part of your fix MUST reside in non-test production source files.
3. **Untracked File Trap (`git add -N .`)**: `submit_patch` stages ALL untracked files inside `/workspace`! Never leave reproduction or scratch files inside `/workspace` — run reproductions inline via `python3 - <<'PY'` or inside `/tmp/repro.py` in a single `run_command`.
4. **Stdout Truncation Rule**: `run_command` truncates stdout after the first 5,000 characters from the TOP. Always run pytest quietly with short tracebacks:
   `pytest path/to/test_file.py -k pattern -q --tb=short --no-header`
   If a test file is large, redirect output to `/tmp/pytest.log` and inspect `tail -n 80 /tmp/pytest.log` so failure tracebacks at the bottom are never cut off.
5. **Strict Pacing Discipline**: `get_status` and `submit_patch` are free and do NOT count toward `max_tool_calls`. Target **16-22 counted tool calls total**, and **begin your first `edit_file` change no later than tool call 15**. Reserve at least 4 calls for verification, `git status --short && git diff`, and submission.

## Execution Protocol

### Phase 1 — Pinpoint Code & Tests Immediately (1-2 tool calls)
- The user message already contains `Workspace Layout` — do NOT waste a turn running `ls` on top-level directories.
- Run a single compound `run_command` with `grep -rn --include="*.py"` to locate:
  (a) the exact symbols, error strings, or functions from the problem description,
  (b) **all parallel or sibling implementations** (for example sync + async variants, `Client` + `AsyncClient`, serializer + deserializer, multiple backends/dialects, base + subclass methods, `__init__.py` / `__all__` exports), and
  (c) the closest existing unit test files under `tests/`.

### Phase 2 — Deep Read & Spec Anchor (2-5 tool calls)
- Use `read_file` with generous `start_line` and `end_line` windows (180-300 lines per call so you read whole modules in fewer calls) on the target function/class, callers, type annotations, and neighboring tests.
- Before editing, verify every explicit and implicit requirement from the issue: exact parameter names, defaults, boundary/domain edge cases, exception types/messages, `None` vs empty collection vs falsy (`0`, `False`, `""`) semantics, mutability/copying, and return types.

### Phase 3 — Reproduce Bug in One Call (1 tool call)
- Run ONE concise command (`python3 - <<'PY' ... PY` or targeted `pytest ... -q --tb=short --no-header`) via `run_command` to observe the exact pre-fix failure. Do NOT spend multiple tool calls writing separate reproduction scripts.

### Phase 4 — Surgical Implementation Across All Parallel Paths (1-4 tool calls)
- Begin editing by tool call 15! Use `edit_file` with 4-6 lines of exact surrounding context copied from `read_file`.
- Update ALL parallel codepaths (sync/async, multiple classes/dialects, type hints) consistently so partial fixes do not fail sibling tests.
- **2-Strike Edit Rule**: If `edit_file` fails twice on the same block due to whitespace or escaping, do not retry `edit_file` a third time — apply an atomic Python transformation via `run_command` and immediately verify `python3 -m py_compile path/to/file.py`.

### Phase 5 — Edge-Case Verification, Diff Hygiene & Clean Exit (2-4 tool calls)
- Run a single compound `run_command` testing both your reproduction + boundary edge cases (`None`, empty input, leading/trailing delimiters, subdomain/prefix boundaries, subclass/async parity) AND the relevant existing `pytest` module(s) with `-q --tb=short --no-header`.
- Run `git status --short && git diff` via `run_command`. Confirm:
  - ZERO untracked (`??`) files in `/workspace` (`rm -f` any untracked workspace files immediately),
  - ZERO modifications to `tests/` or protected config files (`git checkout -- tests/` if touched),
  - Minimal, clean diff with valid imports and indentation.
- Call `submit_patch` once verification passes, then respond with a brief 2-sentence plain-text summary and make NO further tool calls.
Task prompt 5,815 characters
You are evaluating a software engineering task for repository Aunsiels/pyformlang.

Problem Statement:
TER:X notation is not respected for uppercase terminals in CFGs
**Describe the bug**
Consider the difference between the following two CFGs. According to the `from_text` documentation, they should be equivalent.

```
from pyformlang.cfg import CFG, Production, Terminal, Variable

cfg = CFG.from_text('S -> "TER:A"')
print(cfg.is_empty())
print(cfg.productions)

print("vs")
# vs
cfg = CFG(
    variables={"S"},
    terminals={"A"},
    start_symbol="S",
    productions={Production(Variable("S"), (Terminal("A"),))},
)
print(cfg.is_empty())
print(cfg.productions)
```

**Expected behavior**
Generating the second CFG when parsing the first text.

## Task Budget (Session terminates when any budget is exhausted)
- Time allowance: 7.5 minutes
- Tool calls allowance: 30 calls
- Max loop iterations: 40 turns

## Execution Environment Rules
- Single command timeout: 90 seconds (commands exceeding this fail without ending the session)
- Command output limit: 5000 characters
- File view limit: 150 lines per read_file call
- File character limit: 10000 characters per read_file call
- Environment is offline (no network/PyPI access). All repository and test dependencies are ALREADY pre-installed. Do NOT attempt to run pip install or download packages.

## Instructions:
0. All source code is under `/workspace`. Do NOT search outside `/workspace` (e.g. `/usr/`, `/wheels/`, system site-packages). If imports fail, the issue is in the source code under `/workspace`, not in missing system packages.
1. Analyze the problem statement and any provided hints carefully to identify all requested script paths, CLI subcommands, or Python modules.
2. Inspect existing codebase conventions and test files before making edits.
3. Verify your implementation using targeted tests or inline assertions before submitting.
4. Call submit_patch only after your implementation is complete and verified.
5. As your final action, you must return a text-only response reporting your completion to terminate the session.
## Workspace Layout
The repository is located at `/workspace`. Here is the directory tree (up to 3 levels):
```
./CODE_OF_CONDUCT.md
./CONTRIBUTING.md
./Dockerfile
./Jenkinsfile
./LICENSE
./Makefile
./README.md
./doc
./doc/Makefile
./doc/README.txt
./doc/authors.rst
./doc/conf.py
./doc/index.rst
./doc/installation.rst
./doc/make.bat
./doc/modules
./doc/modules/context_free_grammar.rst
./doc/modules/feature_context_free_grammar.rst
./doc/modules/finite_automaton.rst
./doc/modules/fst.rst
./doc/modules/indexed_grammar.rst
./doc/modules/modules.rst
./doc/modules/push_down_automata.rst
./doc/modules/regular_expression.rst
./doc/modules/rsa.rst
./doc/requirements.txt
./doc/usage.rst
./pyformlang
./pyformlang/__init__.py
./pyformlang/cfg
./pyformlang/cfg/__init__.py
./pyformlang/cfg/cfg.py
./pyformlang/cfg/cfg_object.py
./pyformlang/cfg/cyk_table.py
./pyformlang/cfg/epsilon.py
./pyformlang/cfg/llone_parser.py
./pyformlang/cfg/parse_tree.py
./pyformlang/cfg/pda_object_creator.py
./pyformlang/cfg/production.py
./pyformlang/cfg/recursive_decent_parser.py
./pyformlang/cfg/set_queue.py
./pyformlang/cfg/terminal.py
./pyformlang/cfg/tests
./pyformlang/cfg/utils.py
./pyformlang/cfg/utils_cfg.py
./pyformlang/cfg/variable.py
./pyformlang/fcfg
./pyformlang/fcfg/__init__.py
./pyformlang/fcfg/fcfg.py
./pyformlang/fcfg/feature_production.py
./pyformlang/fcfg/feature_structure.py
./pyformlang/fcfg/state.py
./pyformlang/fcfg/tests
./pyformlang/finite_automaton
./pyformlang/finite_automaton/__init__.py
./pyformlang/finite_automaton/deterministic_finite_automaton.py
./pyformlang/finite_automaton/doubly_linked_list.py
./pyformlang/finite_automaton/doubly_linked_node.py
./pyformlang/finite_automaton/epsilon.py
./pyformlang/finite_automaton/epsilon_nfa.py
./pyformlang/finite_automaton/finite_automaton.py
./pyformlang/finite_automaton/finite_automaton_object.py
./pyformlang/finite_automaton/hopcroft_processing_list.py
./pyformlang/finite_automaton/nondeterministic_finite_automaton.py
./pyformlang/finite_automaton/nondeterministic_transition_function.py
./pyformlang/finite_automaton/partition.py
./pyformlang/finite_automaton/regexable.py
./pyformlang/finite_automaton/state.py
./pyformlang/finite_automaton/symbol.py
./pyformlang/finite_automaton/tests
./pyformlang/finite_automaton/transition_function.py
./pyformlang/fst
./pyformlang/fst/__init__.py
./pyformlang/fst/fst.py
./pyformlang/fst/tests
./pyformlang/indexed_grammar
./pyformlang/indexed_grammar/__init__.py
./pyformlang/indexed_grammar/consumption_rule.py
./pyformlang/indexed_grammar/duplication_rule.py
./pyformlang/indexed_grammar/end_rule.py
./pyformlang/indexed_grammar/indexed_grammar.py
./pyformlang/indexed_grammar/production_rule.py
./pyformlang/indexed_grammar/reduced_rule.py
./pyformlang/indexed_grammar/rule_ordering.py
./pyformlang/indexed_grammar/rules.py
./pyformlang/indexed_grammar/tests
./pyformlang/pda
./pyformlang/pda/__init__.py
./pyformlang/pda/cfg_variable_converter.py
./pyformlang/pda/epsilon.py
./pyformlang/pda/pda.py
./pyformlang/pda/stack_symbol.py
./pyformlang/pda/state.py
./pyformlang/pda/symbol.py
./pyformlang/pda/tests
./pyformlang/pda/transition_function.py
./pyformlang/pda/utils.py
./pyformlang/regular_expression
./pyformlang/regular_expression/__init__.py
./pyformlang/regular_expression/python_regex.py
./pyformlang/regular_expression/regex.py
./pyformlang/regular_expression/regex_objects.py
./pyformlang/regular_expression/regex_reader.py
./pyformlang/regular_expression/tests
./pyformlang/rsa
./pyformlang/rsa/__init__.py
./pyformlang/rsa/box.py
./pyformlang/rsa/recursive_automaton.py
./pyformlang/rsa/tests
./pyformlang/tests
./pyformlang/tests/__init__.py
./requirements.txt
./setup.py
```
Turn 1at 21 s274 tokens out3,875 prompt tokens
The user is reporting a bug in `pyformlang.cfg.CFG.from_text`.
Specifically, `TER:X` notation (where X is a terminal) is not respected for uppercase terminals.

Let's start by reproducing the bug with the provided example.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom pyformlang.cfg import CFG, Production, Terminal, Variable\n\nprint(\"Case 1: from_text\")\ncfg1 = CFG.from_text('S -> \"TER:A\"')\nprint(f\"is_empty: {cfg1.is_empty()}\")\nprint(f\"productions: {cfg1.productions}\")\n\nprint(\"\\nvs\\n\")\n\nprint(\"Case 2: Manual CFG\")\ncfg2 = CFG(\n    variables={\"S\"},\n    terminals={\"A\"},\n    start_symbol=\"S\",\n    productions={Production(Variable(\"S\"), (Terminal(\"A\"),))},\n)\nprint(f\"is_empty: {cfg2.is_empty()}\")\nprint(f\"productions: {cfg2.productions}\")\n\nprint(f\"\\nAre they equal? {cfg1 == cfg2}\")\nPY\n"
}
Result of run_command 221 characters
{
  "status": "ok",
  "stdout": "Case 1: from_text\nis_empty: True\nproductions: {S -> A}\n\nvs\n\nCase 2: Manual CFG\nis_empty: False\nproductions: {S -> Terminal(A)}\n\nAre they equal? False\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 274 tokens · stopped: STOP
<|channel>thought The user is reporting a bug in `pyformlang.cfg.CFG.from_text`. Specifically, `TER:X` notation (where X is a terminal) is not respected for uppercase terminals. Let's start by reproducing the bug with the provided example.<channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from pyformlang.cfg import CFG, Production, Terminal, Variable print("Case 1: from_text") cfg1 = CFG.from_text('S -> "TER:A"') print(f"is_empty: {cfg1.is_empty()}") print(f"productions: {cfg1.productions}") print("\nvs\n") print("Case 2: Manual CFG") cfg2 = CFG( variables={"S"}, terminals={"A"}, start_symbol="S", productions={Production(Variable("S"), (Terminal("A"),))}, ) print(f"is_empty: {cfg2.is_empty()}") print(f"productions: {cfg2.productions}") print(f"\nAre they equal? {cfg1 == cfg2}") PY <|"|>}<tool_call|><|tool_response>
Turn 2at 48 s418 tokens out4,252 prompt tokens
Wait, the output is a bit weird.
`Case 1: from_text` -> `productions: {S -> A}`.
Wait, `S -> A`. Is `A` a Variable or a Terminal here?
Usually in `pyformlang`, if it's uppercase, it's treated as a Variable unless specified otherwise.
The `from_text` documentation (or at least the bug report) implies that `"TER:A"` should be treated as Terminal "A".

In `Case 1`, `cfg1.productions` is `{S -> A}`.
In `Case 2`, `cfg2.productions` is `{S -> Terminal(A)}`.
Actually, `Production(Variable("S"), (Terminal("A"),))` should print as `S -> Terminal(A)` if `Terminal` is represented as such, or `S -> A` if the `__repr__` of `Terminal` is just its value.

Let's check the types of the symbols in `cfg1` and `cfg2`.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom pyformlang.cfg import CFG, Production, Terminal, Variable\n\ncfg1 = CFG.from_text('S -> \"TER:A\"')\nfor prod in cfg1.productions:\n    print(f\"Prod: {prod}, LHS: {type(prod.left)}, RHS: {[type(s) for s in prod.right]}\")\n\ncfg2 = CFG(\n    variables={\"S\"},\n    terminals={\"A\"},\n    start_symbol=\"S\",\n    productions={Production(Variable(\"S\"), (Terminal(\"A\"),))},\n)\nfor prod in cfg2.productions:\n    print(f\"Prod: {prod}, LHS: {type(prod.left)}, RHS: {[type(s) for s in prod.right]}\")\nPY\n"
}
Result of run_command 403 characters
{
  "status": "error",
  "error_type": "CommandError",
  "error_message": "Traceback (most recent call last):\n  File \"<stdin>\", line 5, in <module>\nAttributeError: 'Production' object has no attribute 'left'\n",
  "details": {
    "stdout": "",
    "stderr": "Traceback (most recent call last):\n  File \"<stdin>\", line 5, in <module>\nAttributeError: 'Production' object has no attribute 'left'\n",
    "exit_code": 1
  }
}
Generated tokens 418 tokens · stopped: STOP
Wait, the output is a bit weird. `Case 1: from_text` -> `productions: {S -> A}`. Wait, `S -> A`. Is `A` a Variable or a Terminal here? Usually in `pyformlang`, if it's uppercase, it's treated as a Variable unless specified otherwise. The `from_text` documentation (or at least the bug report) implies that `"TER:A"` should be treated as Terminal "A". In `Case 1`, `cfg1.productions` is `{S -> A}`. In `Case 2`, `cfg2.productions` is `{S -> Terminal(A)}`. Actually, `Production(Variable("S"), (Terminal("A"),))` should print as `S -> Terminal(A)` if `Terminal` is represented as such, or `S -> A` if the `__repr__` of `Terminal` is just its value. Let's check the types of the symbols in `cfg1` and `cfg2`. <channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from pyformlang.cfg import CFG, Production, Terminal, Variable cfg1 = CFG.from_text('S -> "TER:A"') for prod in cfg1.productions: print(f"Prod: {prod}, LHS: {type(prod.left)}, RHS: {[type(s) for s in prod.right]}") cfg2 = CFG( variables={"S"}, terminals={"A"}, start_symbol="S", productions={Production(Variable("S"), (Terminal("A"),))}, ) for prod in cfg2.productions: print(f"Prod: {prod}, LHS: {type(prod.left)}, RHS: {[type(s) for s in prod.right]}") PY <|"|>}<tool_call|><|tool_response>
Turn 3at 54 s64 tokens out4,805 prompt tokens
My apologies, I assumed `Production` had `left` and `right` attributes. Let me check the definition of `Production` in `pyformlang/cfg/production.py`.
TOOL CALL · read_file
{
  "filepath": "pyformlang/cfg/production.py"
}
Result of read_file 2,083 characters
{
  "status": "ok",
  "filepath": "pyformlang/cfg/production.py",
  "content": "\"\"\" A production or rule of a CFG \"\"\"\nfrom typing import List\n\nfrom .terminal import Terminal\nfrom .variable import Variable\nfrom .cfg_object import CFGObject\nfrom .epsilon import Epsilon\n\n\nclass Production:\n    \"\"\" A production or rule of a CFG\n\n    Parameters\n    ----------\n    head : :class:`~pyformlang.cfg.Variable`\n        The head of the production\n    body : iterable of :class:`~pyformlang.cfg.CFGObject`\n        The body of the production\n    \"\"\"\n\n    __slots__ = [\"_body\", \"_head\", \"_hash\"]\n\n    def __init__(self, head: Variable, body: List[CFGObject], filtering=True):\n        if filtering:\n            self._body = [x for x in body if not isinstance(x, Epsilon)]\n        else:\n            self._body = body\n        self._head = head\n        self._hash = None\n\n    @property\n    def head(self) -> Variable:\n        \"\"\"Get the head variable\"\"\"\n        return self._head\n\n    @property\n    def body(self) -> List[CFGObject]:\n        \"\"\"Get the body objects\"\"\"\n        return self._body\n\n    def __repr__(self):\n        return str(self.head) + \" -> \" + \" \".join([str(x) for x in self.body])\n\n    def __hash__(self):\n        if self._hash is None:\n            self._hash = sum(map(hash, self._body)) + hash(self._head)\n        return self._hash\n\n    def __eq__(self, other):\n        return self.head == other.head and self.body == other.body\n\n    def is_normal_form(self):\n        \"\"\"\n        Tells is the production is in Chomsky Normal Form\n\n        Returns\n        -------\n        is_normal_form : bool\n            If the production is in CNF\n\n        \"\"\"\n        if len(self._body) == 2:\n            return (isinstance(self._body[0], Variable) and\n                    isinstance(self._body[1], Variable))\n        if len(self._body) == 1:\n            return isinstance(self._body[0], Terminal)\n        return False",
  "start_line": 1,
  "end_line": 67,
  "total_lines": 67,
  "is_truncated": false
}
Generated tokens 64 tokens · stopped: STOP
My apologies, I assumed `Production` had `left` and `right` attributes. Let me check the definition of `Production` in `pyformlang/cfg/production.py`. <channel|><|tool_call>call:read_file{filepath:<|"|>pyformlang/cfg/production.py<|"|>}<tool_call|><|tool_response>
Turn 4at 61 s216 tokens out5,529 prompt tokens
Okay, the attributes are `head` and `body`. Let me re-run the reproduction script.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom pyformlang.cfg import CFG, Production, Terminal, Variable\n\ncfg1 = CFG.from_text('S -> \"TER:A\"')\nfor prod in cfg1.productions:\n    print(f\"Prod: {prod}, LHS: {type(prod.head)}, RHS: {[type(s) for s in prod.body]}\")\n\ncfg2 = CFG(\n    variables={\"S\"},\n    terminals={\"A\"},\n    start_symbol=\"S\",\n    productions={Production(Variable(\"S\"), (Terminal(\"A\"),))},\n)\nfor prod in cfg2.productions:\n    print(f\"Prod: {prod}, LHS: {type(prod.head)}, RHS: {[type(s) for s in prod.body]}\")\nPY\n"
}
Result of run_command 298 characters
{
  "status": "ok",
  "stdout": "Prod: S -> A, LHS: <class 'pyformlang.cfg.variable.Variable'>, RHS: [<class 'pyformlang.cfg.variable.Variable'>]\nProd: S -> Terminal(A), LHS: <class 'pyformlang.cfg.variable.Variable'>, RHS: [<class 'pyformlang.cfg.terminal.Terminal'>]\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 216 tokens · stopped: STOP
Okay, the attributes are `head` and `body`. Let me re-run the reproduction script. <channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from pyformlang.cfg import CFG, Production, Terminal, Variable cfg1 = CFG.from_text('S -> "TER:A"') for prod in cfg1.productions: print(f"Prod: {prod}, LHS: {type(prod.head)}, RHS: {[type(s) for s in prod.body]}") cfg2 = CFG( variables={"S"}, terminals={"A"}, start_symbol="S", productions={Production(Variable("S"), (Terminal("A"),))}, ) for prod in cfg2.productions: print(f"Prod: {prod}, LHS: {type(prod.head)}, RHS: {[type(s) for s in prod.body]}") PY <|"|>}<tool_call|><|tool_response>
Turn 5at 72 s146 tokens out5,863 prompt tokens
Aha!
In `cfg1 = CFG.from_text('S -> "TER:A"')`, the RHS is `[<class 'pyformlang.cfg.variable.Variable'>]`.
So `"TER:A"` was parsed as a `Variable("A")` instead of a `Terminal("A")`.

This confirms the bug: `TER:X` notation is not being respected for uppercase terminals.

Now let's find where `from_text` is implemented. It's likely in `pyformlang/cfg/cfg.py`.
TOOL CALL · read_file
{
  "filepath": "pyformlang/cfg/cfg.py"
}
Result of read_file 5,922 characters
{
  "status": "ok",
  "filepath": "pyformlang/cfg/cfg.py",
  "content": "\"\"\" A context free grammar \"\"\"\nimport string\nfrom copy import deepcopy\nfrom typing import AbstractSet, Iterable, Tuple, Dict, Any, Union\n\nimport networkx as nx\n\n# pylint: disable=cyclic-import\nfrom pyformlang import pda\nfrom pyformlang.finite_automaton import FiniteAutomaton\n# pylint: disable=cyclic-import\nfrom pyformlang.pda import cfg_variable_converter as cvc\nfrom pyformlang import regular_expression\nfrom .cfg_object import CFGObject\n# pylint: disable=cyclic-import\nfrom .cyk_table import CYKTable, DerivationDoesNotExist\nfrom .epsilon import Epsilon\nfrom .pda_object_creator import PDAObjectCreator\nfrom .production import Production\nfrom .terminal import Terminal\nfrom .utils import to_variable, to_terminal\nfrom .utils_cfg import remove_nullable_production, get_productions_d\nfrom .variable import Variable\n\nEPSILON_SYMBOLS = [\"epsilon\", \"$\", \"ε\", \"ϵ\", \"Є\"]\n\nSUBS_SUFFIX = \"#SUBS#\"\n\n\nclass NotParsableException(Exception):\n    \"\"\"When the grammar cannot be parsed (parser not powerful enough)\"\"\"\n\n\ndef is_special_text(text):\n    \"\"\" Check if the input is given an explicit type \"\"\"\n    return len(text) > 5 and \\\n        (text[0:5] == '\"VAR:' or text[0:5] == '\"TER:') and \\\n        text[-1] == '\"'\n\n\nclass CFG:\n    \"\"\" A class representing a context free grammar\n\n    Parameters\n    ----------\n    variables : set of :class:`~pyformlang.cfg.Variable`, optional\n        The variables of the CFG\n    terminals : set of :class:`~pyformlang.cfg.Terminal`, optional\n        The terminals of the CFG\n    start_symbol : :class:`~pyformlang.cfg.Variable`, optional\n        The start symbol\n    productions : set of :class:`~pyformlang.cfg.Production`, optional\n        The productions or rules of the CFG\n    \"\"\"\n\n    # pylint: disable=too-many-instance-attributes\n\n    def __init__(self,\n                 variables: AbstractSet[Union[Variable, str]] = None,\n                 terminals: AbstractSet[Union[Terminal, str]] = None,\n                 start_symbol: Union[Variable, str] = None,\n                 productions: Iterable[Production] = None):\n        if variables is not None:\n            variables = {to_variable(x) for x in variables}\n        self._variables = variables or set()\n        self._variables = set(self._variables)\n        if terminals is not None:\n            terminals = {to_terminal(x) for x in terminals}\n        self._terminals = terminals or set()\n        self._terminals = set(self._terminals)\n        if start_symbol is not None:\n            start_symbol = to_variable(start_symbol)\n        self._start_symbol = start_symbol\n        if start_symbol is not None:\n            self._variables.add(start_symbol)\n        self._productions = productions or set()\n        self._productions = self._productions\n        for production in self._productions:\n            self.__initialize_production_in_cfg(production)\n        self._normal_form = None\n        self._generating_symbols = None\n        self._nullable_symbols = None\n        self._impacts = None\n        self._remaining_lists = None\n        self._added_impacts = None\n\n    def __initialize_production_in_cfg(self, production):\n        self._variables.add(production.head)\n        for cfg_object in production.body:\n            if isinstance(cfg_object, Terminal):\n                self._terminals.add(cfg_object)\n            else:\n                self._variables.add(cfg_object)\n\n    def get_generating_symbols(self) -> AbstractSet[CFGObject]:\n        \"\"\" Gives the objects which are generating in the CFG\n\n        Returns\n        ----------\n        generating_symbols : set of :class:`~pyformlang.cfg.CFGObject`\n            The generating symbols of the CFG\n        \"\"\"\n        if self._generating_symbols is None:\n            self._generating_symbols = self._get_generating_or_nullable(False)\n        return self._generating_symbols\n\n    def _get_generating_or_nullable(self, nullable=False):\n        \"\"\" Merge of nullable and generating \"\"\"\n        to_process = [Epsilon()]\n        g_symbols = {Epsilon()}\n\n        self._set_impacts_and_remaining_lists()\n\n        for symbol in self._added_impacts:\n            if symbol not in g_symbols:\n                g_symbols.add(symbol)\n                to_process.append(symbol)\n\n        if not nullable:\n            for terminal in self._terminals:\n                g_symbols.add(terminal)\n                to_process.append(terminal)\n\n        processed_with_modification = []\n        while to_process:\n            current = to_process.pop()\n            for symbol_impact, index_impact in self._impacts.get(current, []):\n                if symbol_impact in g_symbols:\n                    continue\n                processed_with_modification.append(\n                    (symbol_impact, index_impact))\n                self._remaining_lists[symbol_impact][index_impact] -= 1\n                if self._remaining_lists[symbol_impact][index_impact] == 0:\n                    g_symbols.add(symbol_impact)\n                    to_process.append(symbol_impact)\n        # Fix modifications\n        for symbol_impact, index_impact in processed_with_modification:\n            self._remaining_lists[symbol_impact][index_impact] += 1\n        g_symbols.remove(Epsilon())\n        return g_symbols\n\n    def _set_impacts_and_remaining_lists(self):\n        if self._impacts is not None:\n            return\n        self._added_impacts = set()\n        self._remaining_lists = {}\n        self._impacts = {}\n        for production in self._productions:\n            head = production.head  # Should check if head is not Epsilon?\n            body = production.body",
  "start_line": 1,
  "end_line": 150,
  "total_lines": 1106,
  "is_truncated": true
}
Generated tokens 146 tokens · stopped: STOP
Aha! In `cfg1 = CFG.from_text('S -> "TER:A"')`, the RHS is `[<class 'pyformlang.cfg.variable.Variable'>]`. So `"TER:A"` was parsed as a `Variable("A")` instead of a `Terminal("A")`. This confirms the bug: `TER:X` notation is not being respected for uppercase terminals. Now let's find where `from_text` is implemented. It's likely in `pyformlang/cfg/cfg.py`. <channel|><|tool_call>call:read_file{filepath:<|"|>pyformlang/cfg/cfg.py<|"|>}<tool_call|><|tool_response>
Turn 6at 82 s159 tokens out7,638 prompt tokens
I see `is_special_text` function at line 26.

```python
def is_special_text(text):
    """ Check if the input is given an explicit type """
    return len(text) > 5 and \
        (text[0:5] == '"VAR:' or text[0:5] == '"TER:') and \
        text[-1] == '"'
```

I need to find where `from_text` is and how it uses `is_special_text`.
Let's search for `def from_text`.
TOOL CALL · run_command
{
  "command": "grep -n \"def from_text\" pyformlang/cfg/cfg.py"
}
Result of run_command 126 characters
{
  "status": "ok",
  "stdout": "1028:    def from_text(cls, text, start_symbol=Variable(\"S\")):\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 159 tokens · stopped: STOP
I see `is_special_text` function at line 26. ```python def is_special_text(text): """ Check if the input is given an explicit type """ return len(text) > 5 and \ (text[0:5] == '"VAR:' or text[0:5] == '"TER:') and \ text[-1] == '"' ``` I need to find where `from_text` is and how it uses `is_special_text`. Let's search for `def from_text`.<channel|><|tool_call>call:run_command{command:<|"|>grep -n "def from_text" pyformlang/cfg/cfg.py<|"|>}<tool_call|><|tool_response>
Turn 7at 87 s65 tokens out7,863 prompt tokens
Let's read `from_text` in `pyformlang/cfg/cfg.py`.
TOOL CALL · read_file
{
  "filepath": "pyformlang/cfg/cfg.py\\\", start_line: 1020, end_line: 1106%"
}
Result of read_file 493 characters
{
  "status": "error",
  "error_type": "FileReadError",
  "error_message": "404 Client Error for http+docker://localhost/v1.52/containers/3e535bc731ffda2650148e7a0692dac7303b9f102a9848473615b6f5ede0f4cc/archive?path=%2Fworkspace%2Fpyformlang%2Fcfg%2Fcfg.py%5C%22%2C+start_line%3A+1020%2C+end_line%3A+1106%25: Not Found (\"Could not find the file /workspace/pyformlang/cfg/cfg.py\\\", start_line: 1020, end_line: 1106% in container 3e535bc731ffda2650148e7a0692dac7303b9f102a9848473615b6f5ede0f4cc\")"
}
Generated tokens 65 tokens · stopped: STOP
Let's read `from_text` in `pyformlang/cfg/cfg.py`. <channel|><|tool_call>call:read_file{filepath:<|"|>pyformlang/cfg/cfg.py\", start_line: 1020, end_line: 1106%}<tool_call|><|tool_response>
Turn 8at 93 s70 tokens out8,210 prompt tokens
I made a mistake in the `filepath` argument of `read_file`. I accidentally included the trailing `%` and some quotes.
TOOL CALL · read_file
{
  "end_line": 1106,
  "filepath": "pyformlang/cfg/cfg.py",
  "start_line": 1020
}
Result of read_file 3,667 characters
{
  "status": "ok",
  "filepath": "pyformlang/cfg/cfg.py",
  "content": "        \"\"\"\n        res = []\n        for production in self._productions:\n            res.append(str(production.head) + \" -> \" +\n                       \" \".join([x.to_text() for x in production.body]))\n        return \"\\n\".join(res) + \"\\n\"\n\n    @classmethod\n    def from_text(cls, text, start_symbol=Variable(\"S\")):\n        \"\"\"\n        Read a context free grammar from a text.\n        The text contains one rule per line.\n        The structure of a production is:\n        head -> body1 | body2 | ... | bodyn\n        where | separates the bodies.\n        A variable (or non terminal) begins by a capital letter.\n        A terminal begins by a non-capital character\n        Terminals and Variables are separated by spaces.\n        An epsilon symbol can be represented by epsilon, $, ε, ϵ or Є.\n        If you want to have a variable name starting with a non-capital \\\n        letter or a terminal starting with a capital letter, you can \\\n        explicitly give the type of your symbol with \"VAR:yourVariableName\" \\\n        or \"TER:yourTerminalName\" (with the quotation marks). For example:\n        S -> \"TER:John\" \"VAR:d\" a b\n\n        Parameters\n        ----------\n        text : str\n            The text of transform\n        start_symbol : str, optional\n            The start symbol, S by default\n\n        Returns\n        -------\n        cfg : :class:`~pyformlang.cfg.CFG`\n            A context free grammar.\n        \"\"\"\n        variables = set()\n        productions = set()\n        terminals = set()\n        for line in text.splitlines():\n            line = line.strip()\n            if not line:\n                continue\n            cls._read_line(line, productions, terminals, variables)\n        return cls(variables=variables, terminals=terminals,\n                   productions=productions, start_symbol=start_symbol)\n\n    @classmethod\n    def _read_line(cls, line, productions, terminals, variables):\n        head_s, body_s = line.split(\"->\")\n        head_text = head_s.strip()\n        if is_special_text(head_text):\n            head_text = head_text[5:-1]\n        head = Variable(head_text)\n        variables.add(head)\n        for sub_body in body_s.split(\"|\"):\n            body = []\n            for body_component in sub_body.split():\n                if is_special_text(body_component):\n                    type_component = body_component[1:4]\n                    body_component = body_component[5:-1]\n                else:\n                    type_component = \"\"\n                if body_component[0] in string.ascii_uppercase or \\\n                        type_component == \"VAR\":\n                    body_var = Variable(body_component)\n                    variables.add(body_var)\n                    body.append(body_var)\n                elif body_component not in EPSILON_SYMBOLS or type_component \\\n                        == \"TER\":\n                    body_ter = Terminal(body_component)\n                    terminals.add(body_ter)\n                    body.append(body_ter)\n            productions.add(Production(head, body))\n\n    def is_normal_form(self):\n        \"\"\"\n        Tells is the current grammar is in Chomsky Normal Form or not\n\n        Returns\n        -------\n        is_normal_form : bool\n            If the current grammar is in CNF\n        \"\"\"\n        return all(\n            production.is_normal_form() for production in self._productions)",
  "start_line": 1020,
  "end_line": 1106,
  "total_lines": 1106,
  "is_truncated": false
}
Generated tokens 70 tokens · stopped: STOP
I made a mistake in the `filepath` argument of `read_file`. I accidentally included the trailing `%` and some quotes. <channel|><|tool_call>call:read_file{end_line:1106,filepath:<|"|>pyformlang/cfg/cfg.py<|"|>,start_line:1020}<tool_call|><|tool_response>
Turn 9at 333 s4,427 tokens out9,250 prompt tokens
I found the bug! Look at `_read_line`:

```python
    @classmethod
    def _read_line(cls, line, productions, terminals, variables):
        head_s, body_s = line.split("->")
        head_text = head_s.strip()
        if is_special_text(head_text):
            head_text = head_text[5:-1]
        head = Variable(head_text)
        variables.add(head)
        for sub_body in body_s.split("|"):
            body = []
            for body_component in sub_body.split():
                if is_special_text(body_component):
                    type_component = body_component[1:4]
                    body_component = body_component[5:-1]
                else:
                    type_component = ""
                if body_component[0] in string.ascii_uppercase or \
                        type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif body_component not in EPSILON_SYMBOLS or type_component \
                        == "TER":
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
            productions.add(Production(head, body))
```

Wait, look at this:

```python
                if body_component[0] in string.ascii_uppercase or \
                        type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif body_component not in EPSILON_SYMBOLS or type_component \
                        == "TER":
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```

If `type_component == "TER"`, but `body_component[0]` is in `string.ascii_uppercase`, the first `if` block is entered and it becomes a `Variable`.

If `is_special_text(body_component)` is true, and it is `"TER:A"`, then `type_component` becomes `"TER"` and `body_component` becomes `"A"`.
Since `"A"` is in `string.ascii_uppercase`, it enters the `if` block:

```python
                if body_component[0] in string.ascii_uppercase or \
                        type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
```

And it is treated as a `Variable`, even though `type_component == "TER"`.

The logic should be:
1. If `type_component == "VAR"`, it's a `Variable`.
2. If `type_component == "TER"`, it's a `Terminal`.
3. If no `type_component`, use the first letter to decide:
    - Uppercase -> `Variable`
    - Not Uppercase (and not epsilon) -> `Terminal`
    - Epsilon -> Epsilon

Wait, let's look closer at the original code:

```python
                if body_component[0] in string.ascii_uppercase or \
                        type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif body_component not in EPSILON_SYMBOLS or type_component \
                        == "TER":
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```

If `type_component` is `"TER"`, we WANT it to be a `Terminal`. But if it also starts with uppercase, the first `if` takes precedence.

The correct logic should prioritize `type_component` if it's set.

Revised logic:
```python
                if type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif type_component == "TER":
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
                elif body_component[0] in string.ascii_uppercase:
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif body_component not in EPSILON_SYMBOLS:
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```

Wait, what about the `elif body_component not in EPSILON_SYMBOLS or type_component == "TER":`?
If `body_component` IS in `EPSILON_SYMBOLS`, and `type_component` is `"TER"`, it should probably be a `Terminal` of the epsilon symbol's name, not an `Epsilon` object. Actually, `Epsilon` is a special class. If someone does `"TER:epsilon"`, they probably want a terminal that looks like "epsilon".

Let's see how `EPSILON_SYMBOLS` are handled.
If `body_component` is in `EPSILON_SYMBOLS`, and `type_component == ""`, then it fails the first `if` (assuming epsilon symbol is lowercase) and the `elif` (since `body_component not in EPSILON_SYMBOLS` is false, and `type_component == "TER"` is false). So it just doesn't get added to the body?

Wait, `Epsilon` objects are filtered out in `Production.__init__` if `filtering=True`.
Wait, I should check how epsilon is normally added.

Looking at `_read_line` again:
```python
                if body_component[0] in string.ascii_uppercase or \
                        type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif body_component not in EPSILON_SYMBOLS or type_component \
                        == "TER":
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```
If `body_component` equals `"epsilon"` and `type_component` is `""`:
- `body_component[0]` is `'e'`, not uppercase. `type_component` is `""`, not `"VAR"`.
- `body_component not in EPSILON_SYMBOLS` is False. `type_component == "TER"` is False.
Result: nothing is appended to `body`. This is how empty productions (epsilon) are handled in `from_text`.

So if `type_component == "TER"`, we MUST treat it as a `Terminal`, even if it's in `EPSILON_SYMBOLS` or starts with uppercase.

So the logic should be:
1. If `type_component` is present:
    - If `"VAR"`, Variable.
    - If `"TER"`, Terminal.
2. If `type_component` is NOT present:
    - If `body_component[0]` is uppercase, Variable.
    - If `body_component` is not in `EPSILON_SYMBOLS`, Terminal.
    - Else (it's an epsilon symbol), skip (meaning epsilon production).

Wait, one more thing: `body_component[0]` will raise `IndexError` if `body_component` is an empty string. `sub_body.split()` should prevent that, but let's be careful.

Let's implement this.

```python
                if type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif type_component == "TER":
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
                elif body_component[0] in string.ascii_uppercase:
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif body_component not in EPSILON_SYMBOLS:
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```

Actually, we can simplify:
```python
                if type_component == "VAR" or (not type_component and body_component[0] in string.ascii_uppercase):
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif type_component == "TER" or (not type_component and body_component not in EPSILON_SYMBOLS):
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```

Let's double check if `body_component` can be empty. `sub_body.split()` returns a list of non-empty strings.

Wait, look at the original code again.
```python
                if body_component[0] in string.ascii_uppercase or \
                        type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif body_component not in EPSILON_SYMBOLS or type_component \
                        == "TER":
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```
If `type_component == "TER"` and `body_component[0]` is uppercase, it's a `Variable`. This is the bug.
If `type_component == "VAR"` and `body_component[0]` is NOT uppercase, it's a `Variable`. This is correct.

So the problem is only when `type_component == "TER"` and `body_component[0]` is uppercase.

If we just change the order:
```python
                if type_component == "VAR" or \
                        (type_component == "" and body_component[0] in string.ascii_uppercase):
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif type_component == "TER" or \
                        (type_component == "" and body_component not in EPSILON_SYMBOLS):
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```

But wait, what if `type_component` is neither `"VAR"` nor `"TER"`? The `is_special_text` function only returns true if it starts with `"VAR:` or `"TER:`.

```python
def is_special_text(text):
    """ Check if the input is given an explicit type """
    return len(text) > 5 and \
        (text[0:5] == '"VAR:' or text[0:5] == '"TER:') and \
        text[-1] == '"'
```

Wait, `text[0:5]` for `"VAR:A"`...
`"VAR:A"`: indices 0 1 2 3 4.
`text[0:5]` is `"VAR:A"` if the string is `"VAR:A"`.
But look at the code: `(text[0:5] == '"VAR:' or text[0:5] == '"TER:')`.
The first character is a double quote.
So `"VAR:A"` would be `'"VAR:A"'`.
`text[0:5]` would be `'"VAR:'`.
This is correct.

Then:
```python
                if is_special_text(body_component):
                    type_component = body_component[1:4]
                    body_component = body_component[5:-1]
```
If `body_component` is `'"TER:A"'`:
`type_component = body_component[1:4]` -> `body_component[1]` is `T`, `[2]` is `E`, `[3]` is `R`. So `type_component` is `"TER"`.
`body_component = body_component[5:-1]` -> from index 5 to before the last char.
`'"TER:A"'`
012345
`"` `T` `E` `R` `:` `A` `"`
Index 5 is `A`. Last char is `"`. So `body_component` becomes `"A"`.

This is correct.

So the fix is indeed to prioritize `type_component`.

Let's try to implement it. I'll use the more explicit version for clarity.

```python
                if type_component == "VAR":
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif type_component == "TER":
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
                elif body_component[0] in string.ascii_uppercase:
                    body_var = Variable(body_component)
                    variables.add(body_var)
                    body.append(body_var)
                elif body_component not in EPSILON_SYMBOLS:
                    body_ter = Terminal(body_component)
                    terminals.add(body_ter)
                    body.append(body_ter)
```

Wait, I should also check if this affects any other case.
Case 1: `body_component` is `"S"`, no type.
- `type_component == "VAR"` (F)
- `type_component == "TER"` (F)
- `body_component[0]` is `'S'` (T) -> Variable. Correct.

Case 2: `body_component` is `"a"`, no type.
- `type_component == "VAR"` (F)
- `type_component == "TER"` (F)
- `body_component[0]` is `'a'` (F)
- `body_component` is not in `EPSILON_SYMBOLS` (T) -> Terminal. Correct.

Case 3: `body_component` is `"epsilon"`, no type.
- `type_component == "VAR"` (F)
- `type_component == "TER"` (F)
- `body_component[0]` is `'e'` (F)
- `body_component` is not in `EPSILON_SYMBOLS` (F) -> Skip. Correct.

Case 4: `body_component` is `'"TER:A"'`. `type_component` is `"TER"`, `body_component` is `"A"`.
- `type_component == "VAR"` (F)
- `type_component == "TER"` (T) -> Terminal. Correct! (Before it was Variable)

Case 5: `body_component` is `'"VAR:a"'`. `type_component` is `"VAR"`, `body_component` is `"a"`.
- `type_component == "VAR"` (T) -> Variable. Correct! (Before it was Terminal)

Case 6: `body_component` is `'"TER:epsilon"'`. `type_component` is `"TER"`, `body_component` is `"epsilon"`.
- `type_component == "VAR"` (F)
- `type_component == "TER"` (T) -> Terminal. Correct!

Case 7: `body_component` is `'"VAR:S"'`. `type_component` is `"VAR"`, `body_component` is `"S"`.
- `type_component == "VAR"` (T) -> Variable. Correct.

This logic seems robust.

Wait, I should check the `head` as well.
```python
        if is_special_text(head_text):
            head_text = head_text[5:-1]
        head = Variable(head_text)
        variables.add(head)
```
The head is always a `Variable` in a CFG. If it's `"TER:S"`, it should still be a `Variable("S")`.
Actually, the documentation says:
`If you want to have a variable name starting with a non-capital letter or a terminal starting with a capital letter, you can explicitly give the type of your symbol with "VAR:yourVariableName" or "TER:yourTerminalName" (with the quotation marks).`

Wait, does this apply to the head too?
If `head_text` is `'"TER:A"'`, then `is_special_text` is true, and `head_text` becomes `"A"`. Then it's wrapped in `Variable("A")`.
Is this what's intended?
Usually, the left hand side of a production in CFG MUST be a variable.
If the user writes `'"TER:A"' -> 'b'`, they might be trying to create something that's not a CFG, but the class is `CFG`.
The current code:
```python
        if is_special_text(head_text):
            head_text = head_text[5:-1]
        head = Variable(head_text)
        variables.add(head)
```
It always makes the head a `Variable`. This seems correct for a `CF
TOOL CALL · edit_file
{
  "filepath": "pyformlang/cfg/cfg.py",
  "new_string": "                if type_component == \"VAR\":\n                    body_var = Variable(body_component)\n                    variables.add(body_var)\n                    body.append(body_var)\n                elif type_component == \"TER\":\n                    body_ter = Terminal(body_component)\n                    terminals.add(body_ter)\n                    body.append(body_ter)\n                elif body_component[0] in string.ascii_uppercase:\n                    body_var = Variable(body_component)\n                    variables.add(body_var)\n                    body.append(body_var)\n                elif body_component not in EPSILON_SYMBOLS:\n                    body_ter = Terminal(body_component)\n                    terminals.add(body_ter)\n                    body.append(body_ter)",
  "old_string": "                if body_component[0] in string.ascii_uppercase or \\\n                        type_component == \"VAR\":\n                    body_var = Variable(body_component)\n                    variables.add(body_var)\n                    body.append(body_var)\n                elif body_component not in EPSILON_SYMBOLS or type_component \\\n                        == \"TER\":\n                    body_ter = Terminal(body_component)\n                    terminals.add(body_ter)\n                    body.append(body_ter)"
}
Result of edit_file 1,402 characters
{
  "status": "ok",
  "filepath": "pyformlang/cfg/cfg.py",
  "occurrences": 1,
  "strategy": "exact",
  "diff": "--- a/pyformlang/cfg/cfg.py\n+++ b/pyformlang/cfg/cfg.py\n@@ -1081,13 +1081,19 @@\n                     body_component = body_component[5:-1]\n                 else:\n                     type_component = \"\"\n-                if body_component[0] in string.ascii_uppercase or \\\n-                        type_component == \"VAR\":\n+                if type_component == \"VAR\":\n                     body_var = Variable(body_component)\n                     variables.add(body_var)\n                     body.append(body_var)\n-                elif body_component not in EPSILON_SYMBOLS or type_component \\\n-                        == \"TER\":\n+                elif type_component == \"TER\":\n+                    body_ter = Terminal(body_component)\n+                    terminals.add(body_ter)\n+                    body.append(body_ter)\n+                elif body_component[0] in string.ascii_uppercase:\n+                    body_var = Variable(body_component)\n+                    variables.add(body_var)\n+                    body.append(body_var)\n+                elif body_component not in EPSILON_SYMBOLS:\n                     body_ter = Terminal(body_component)\n                     terminals.add(body_ter)\n                     body.append(body_ter)\n",
  "is_truncated": false
}
Generated tokens 4,427 tokens · stopped: STOP
I found the bug! Look at `_read_line`: ```python @classmethod def _read_line(cls, line, productions, terminals, variables): head_s, body_s = line.split("->") head_text = head_s.strip() if is_special_text(head_text): head_text = head_text[5:-1] head = Variable(head_text) variables.add(head) for sub_body in body_s.split("|"): body = [] for body_component in sub_body.split(): if is_special_text(body_component): type_component = body_component[1:4] body_component = body_component[5:-1] else: type_component = "" if body_component[0] in string.ascii_uppercase or \ type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS or type_component \ == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) productions.add(Production(head, body)) ``` Wait, look at this: ```python if body_component[0] in string.ascii_uppercase or \ type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS or type_component \ == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` If `type_component == "TER"`, but `body_component[0]` is in `string.ascii_uppercase`, the first `if` block is entered and it becomes a `Variable`. If `is_special_text(body_component)` is true, and it is `"TER:A"`, then `type_component` becomes `"TER"` and `body_component` becomes `"A"`. Since `"A"` is in `string.ascii_uppercase`, it enters the `if` block: ```python if body_component[0] in string.ascii_uppercase or \ type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) ``` And it is treated as a `Variable`, even though `type_component == "TER"`. The logic should be: 1. If `type_component == "VAR"`, it's a `Variable`. 2. If `type_component == "TER"`, it's a `Terminal`. 3. If no `type_component`, use the first letter to decide: - Uppercase -> `Variable` - Not Uppercase (and not epsilon) -> `Terminal` - Epsilon -> Epsilon Wait, let's look closer at the original code: ```python if body_component[0] in string.ascii_uppercase or \ type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS or type_component \ == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` If `type_component` is `"TER"`, we WANT it to be a `Terminal`. But if it also starts with uppercase, the first `if` takes precedence. The correct logic should prioritize `type_component` if it's set. Revised logic: ```python if type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif type_component == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) elif body_component[0] in string.ascii_uppercase: body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS: body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` Wait, what about the `elif body_component not in EPSILON_SYMBOLS or type_component == "TER":`? If `body_component` IS in `EPSILON_SYMBOLS`, and `type_component` is `"TER"`, it should probably be a `Terminal` of the epsilon symbol's name, not an `Epsilon` object. Actually, `Epsilon` is a special class. If someone does `"TER:epsilon"`, they probably want a terminal that looks like "epsilon". Let's see how `EPSILON_SYMBOLS` are handled. If `body_component` is in `EPSILON_SYMBOLS`, and `type_component == ""`, then it fails the first `if` (assuming epsilon symbol is lowercase) and the `elif` (since `body_component not in EPSILON_SYMBOLS` is false, and `type_component == "TER"` is false). So it just doesn't get added to the body? Wait, `Epsilon` objects are filtered out in `Production.__init__` if `filtering=True`. Wait, I should check how epsilon is normally added. Looking at `_read_line` again: ```python if body_component[0] in string.ascii_uppercase or \ type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS or type_component \ == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` If `body_component` equals `"epsilon"` and `type_component` is `""`: - `body_component[0]` is `'e'`, not uppercase. `type_component` is `""`, not `"VAR"`. - `body_component not in EPSILON_SYMBOLS` is False. `type_component == "TER"` is False. Result: nothing is appended to `body`. This is how empty productions (epsilon) are handled in `from_text`. So if `type_component == "TER"`, we MUST treat it as a `Terminal`, even if it's in `EPSILON_SYMBOLS` or starts with uppercase. So the logic should be: 1. If `type_component` is present: - If `"VAR"`, Variable. - If `"TER"`, Terminal. 2. If `type_component` is NOT present: - If `body_component[0]` is uppercase, Variable. - If `body_component` is not in `EPSILON_SYMBOLS`, Terminal. - Else (it's an epsilon symbol), skip (meaning epsilon production). Wait, one more thing: `body_component[0]` will raise `IndexError` if `body_component` is an empty string. `sub_body.split()` should prevent that, but let's be careful. Let's implement this. ```python if type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif type_component == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) elif body_component[0] in string.ascii_uppercase: body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS: body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` Actually, we can simplify: ```python if type_component == "VAR" or (not type_component and body_component[0] in string.ascii_uppercase): body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif type_component == "TER" or (not type_component and body_component not in EPSILON_SYMBOLS): body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` Let's double check if `body_component` can be empty. `sub_body.split()` returns a list of non-empty strings. Wait, look at the original code again. ```python if body_component[0] in string.ascii_uppercase or \ type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS or type_component \ == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` If `type_component == "TER"` and `body_component[0]` is uppercase, it's a `Variable`. This is the bug. If `type_component == "VAR"` and `body_component[0]` is NOT uppercase, it's a `Variable`. This is correct. So the problem is only when `type_component == "TER"` and `body_component[0]` is uppercase. If we just change the order: ```python if type_component == "VAR" or \ (type_component == "" and body_component[0] in string.ascii_uppercase): body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif type_component == "TER" or \ (type_component == "" and body_component not in EPSILON_SYMBOLS): body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` But wait, what if `type_component` is neither `"VAR"` nor `"TER"`? The `is_special_text` function only returns true if it starts with `"VAR:` or `"TER:`. ```python def is_special_text(text): """ Check if the input is given an explicit type """ return len(text) > 5 and \ (text[0:5] == '"VAR:' or text[0:5] == '"TER:') and \ text[-1] == '"' ``` Wait, `text[0:5]` for `"VAR:A"`... `"VAR:A"`: indices 0 1 2 3 4. `text[0:5]` is `"VAR:A"` if the string is `"VAR:A"`. But look at the code: `(text[0:5] == '"VAR:' or text[0:5] == '"TER:')`. The first character is a double quote. So `"VAR:A"` would be `'"VAR:A"'`. `text[0:5]` would be `'"VAR:'`. This is correct. Then: ```python if is_special_text(body_component): type_component = body_component[1:4] body_component = body_component[5:-1] ``` If `body_component` is `'"TER:A"'`: `type_component = body_component[1:4]` -> `body_component[1]` is `T`, `[2]` is `E`, `[3]` is `R`. So `type_component` is `"TER"`. `body_component = body_component[5:-1]` -> from index 5 to before the last char. `'"TER:A"'` 012345 `"` `T` `E` `R` `:` `A` `"` Index 5 is `A`. Last char is `"`. So `body_component` becomes `"A"`. This is correct. So the fix is indeed to prioritize `type_component`. Let's try to implement it. I'll use the more explicit version for clarity. ```python if type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif type_component == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) elif body_component[0] in string.ascii_uppercase: body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS: body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) ``` Wait, I should also check if this affects any other case. Case 1: `body_component` is `"S"`, no type. - `type_component == "VAR"` (F) - `type_component == "TER"` (F) - `body_component[0]` is `'S'` (T) -> Variable. Correct. Case 2: `body_component` is `"a"`, no type. - `type_component == "VAR"` (F) - `type_component == "TER"` (F) - `body_component[0]` is `'a'` (F) - `body_component` is not in `EPSILON_SYMBOLS` (T) -> Terminal. Correct. Case 3: `body_component` is `"epsilon"`, no type. - `type_component == "VAR"` (F) - `type_component == "TER"` (F) - `body_component[0]` is `'e'` (F) - `body_component` is not in `EPSILON_SYMBOLS` (F) -> Skip. Correct. Case 4: `body_component` is `'"TER:A"'`. `type_component` is `"TER"`, `body_component` is `"A"`. - `type_component == "VAR"` (F) - `type_component == "TER"` (T) -> Terminal. Correct! (Before it was Variable) Case 5: `body_component` is `'"VAR:a"'`. `type_component` is `"VAR"`, `body_component` is `"a"`. - `type_component == "VAR"` (T) -> Variable. Correct! (Before it was Terminal) Case 6: `body_component` is `'"TER:epsilon"'`. `type_component` is `"TER"`, `body_component` is `"epsilon"`. - `type_component == "VAR"` (F) - `type_component == "TER"` (T) -> Terminal. Correct! Case 7: `body_component` is `'"VAR:S"'`. `type_component` is `"VAR"`, `body_component` is `"S"`. - `type_component == "VAR"` (T) -> Variable. Correct. This logic seems robust. Wait, I should check the `head` as well. ```python if is_special_text(head_text): head_text = head_text[5:-1] head = Variable(head_text) variables.add(head) ``` The head is always a `Variable` in a CFG. If it's `"TER:S"`, it should still be a `Variable("S")`. Actually, the documentation says: `If you want to have a variable name starting with a non-capital letter or a terminal starting with a capital letter, you can explicitly give the type of your symbol with "VAR:yourVariableName" or "TER:yourTerminalName" (with the quotation marks).` Wait, does this apply to the head too? If `head_text` is `'"TER:A"'`, then `is_special_text` is true, and `head_text` becomes `"A"`. Then it's wrapped in `Variable("A")`. Is this what's intended? Usually, the left hand side of a production in CFG MUST be a variable. If the user writes `'"TER:A"' -> 'b'`, they might be trying to create something that's not a CFG, but the class is `CFG`. The current code: ```python if is_special_text(head_text): head_text = head_text[5:-1] head = Variable(head_text) variables.add(head) ``` It always makes the head a `Variable`. This seems correct for a `CF<channel|><|tool_call>call:edit_file{filepath:<|"|>pyformlang/cfg/cfg.py<|"|>,new_string:<|"|> if type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif type_component == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter) elif body_component[0] in string.ascii_uppercase: body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS: body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter)<|"|>,old_string:<|"|> if body_component[0] in string.ascii_uppercase or \ type_component == "VAR": body_var = Variable(body_component) variables.add(body_var) body.append(body_var) elif body_component not in EPSILON_SYMBOLS or type_component \ == "TER": body_ter = Terminal(body_component) terminals.add(body_ter) body.append(body_ter)<|"|>}<tool_call|><|tool_response>
Turn 10at 343 s226 tokens out14,062 prompt tokens
Now let's verify the fix with the reproduction script.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom pyformlang.cfg import CFG, Production, Terminal, Variable\n\nprint(\"Case 1: from_text\")\ncfg1 = CFG.from_text('S -> \"TER:A\"')\nprint(f\"is_empty: {cfg1.is_empty()}\")\nprint(f\"productions: {cfg1.productions}\")\n\nprint(\"\\nvs\\n\")\n\nprint(\"Case 2: Manual CFG\")\ncfg2 = CFG(\n    variables={\"S\"},\n    terminals={\"A\"},\n    start_symbol=\"S\",\n    productions={Production(Variable(\"S\"), (Terminal(\"A\"),))},\n)\nprint(f\"is_empty: {cfg2.is_empty()}\")\nprint(f\"productions: {cfg2.productions}\")\n\nprint(f\"\\nAre they equal? {cfg1 == cfg2}\")\nPY\n"
}
Result of run_command 232 characters
{
  "status": "ok",
  "stdout": "Case 1: from_text\nis_empty: False\nproductions: {S -> Terminal(A)}\n\nvs\n\nCase 2: Manual CFG\nis_empty: False\nproductions: {S -> Terminal(A)}\n\nAre they equal? False\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 226 tokens · stopped: STOP
Now let's verify the fix with the reproduction script. <channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from pyformlang.cfg import CFG, Production, Terminal, Variable print("Case 1: from_text") cfg1 = CFG.from_text('S -> "TER:A"') print(f"is_empty: {cfg1.is_empty()}") print(f"productions: {cfg1.productions}") print("\nvs\n") print("Case 2: Manual CFG") cfg2 = CFG( variables={"S"}, terminals={"A"}, start_symbol="S", productions={Production(Variable("S"), (Terminal("A"),))}, ) print(f"is_empty: {cfg2.is_empty()}") print(f"productions: {cfg2.productions}") print(f"\nAre they equal? {cfg1 == cfg2}") PY <|"|>}<tool_call|><|tool_response>
Turn 11at 365 s317 tokens out14,392 prompt tokens
Wait, `Are they equal? False`. Why?
`cfg1` and `cfg2` both have `productions: {S -> Terminal(A)}`.
Ah, let's look at the symbols.

`cfg1` was produced by `from_text`, so it had `variables` and `terminals` calculated during parsing.
`cfg2` had them explicitly passed.

Let's check the variables and terminals of both.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom pyformlang.cfg import CFG, Production, Terminal, Variable\n\ncfg1 = CFG.from_text('S -> \"TER:A\"')\nprint(f\"cfg1 variables: {cfg1._variables}\")\nprint(f\"cfg1 terminals: {cfg1._terminals}\")\nprint(f\"cfg1 start symbol: {cfg1._start_symbol}\")\n\ncfg2 = CFG(\n    variables={\"S\"},\n    terminals={\"A\"},\n    start_symbol=\"S\",\n    productions={Production(Variable(\"S\"), (Terminal(\"A\"),))},\n)\nprint(f\"cfg2 variables: {cfg2._variables}\")\nprint(f\"cfg2 terminals: {cfg2._terminals}\")\nprint(f\"cfg2 start symbol: {cfg2._start_symbol}\")\n\nprint(f\"\\nAre they equal? {cfg1 == cfg2}\")\nPY\n"
}
Result of run_command 253 characters
{
  "status": "ok",
  "stdout": "cfg1 variables: {Variable(S)}\ncfg1 terminals: {Terminal(A)}\ncfg1 start symbol: S\ncfg2 variables: {Variable(S)}\ncfg2 terminals: {Terminal(A)}\ncfg2 start symbol: S\n\nAre they equal? False\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 317 tokens · stopped: STOP
Wait, `Are they equal? False`. Why? `cfg1` and `cfg2` both have `productions: {S -> Terminal(A)}`. Ah, let's look at the symbols. `cfg1` was produced by `from_text`, so it had `variables` and `terminals` calculated during parsing. `cfg2` had them explicitly passed. Let's check the variables and terminals of both. <channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from pyformlang.cfg import CFG, Production, Terminal, Variable cfg1 = CFG.from_text('S -> "TER:A"') print(f"cfg1 variables: {cfg1._variables}") print(f"cfg1 terminals: {cfg1._terminals}") print(f"cfg1 start symbol: {cfg1._start_symbol}") cfg2 = CFG( variables={"S"}, terminals={"A"}, start_symbol="S", productions={Production(Variable("S"), (Terminal("A"),))}, ) print(f"cfg2 variables: {cfg2._variables}") print(f"cfg2 terminals: {cfg2._terminals}") print(f"cfg2 start symbol: {cfg2._start_symbol}") print(f"\nAre they equal? {cfg1 == cfg2}") PY <|"|>}<tool_call|><|tool_response>
Turn 12at 433 s296 tokens out7,893 prompt tokens
Wait, why are they not equal?
Let's look at `pyformlang/cfg/cfg.py` to see `__eq__`.

Actually, maybe it's because I'm comparing `CFG` objects.
Let's check how `CFG` implements `__eq__`.

Wait, look at the output:
`cfg1 start symbol: S` (a string)
`cfg2 start symbol: S` (a string)

Wait, let's check if `Variable("S")` is the same as `"S"`. No, it should be.

Maybe I should just check the productions.
TOOL CALL · run_command
{
  "command": "python3 - <<'PY'\nfrom pyformlang.cfg import CFG, Production, Terminal, Variable\n\ncfg1 = CFG.from_text('S -> \"TER:A\"')\ncfg2 = CFG(\n    variables={\"S\"},\n    terminals={\"A\"},\n    start_symbol=\"S\",\n    productions={Production(Variable(\"S\"), (Terminal(\"A\"),))},\n)\n\nprint(f\"cfg1 prods: {cfg1.productions}\")\nprint(f\"cfg2 prods: {cfg2.productions}\")\nprint(f\"Prods equal? {cfg1.productions == cfg2.productions}\")\nPY\n"
}
Result of run_command 143 characters
{
  "status": "ok",
  "stdout": "cfg1 prods: {S -> Terminal(A)}\ncfg2 prods: {S -> Terminal(A)}\nProds equal? True\n",
  "stderr": "",
  "exit_code": 0
}
Generated tokens 296 tokens · stopped: STOP
Wait, why are they not equal? Let's look at `pyformlang/cfg/cfg.py` to see `__eq__`. Actually, maybe it's because I'm comparing `CFG` objects. Let's check how `CFG` implements `__eq__`. Wait, look at the output: `cfg1 start symbol: S` (a string) `cfg2 start symbol: S` (a string) Wait, let's check if `Variable("S")` is the same as `"S"`. No, it should be. Maybe I should just check the productions. <channel|><|tool_call>call:run_command{command:<|"|>python3 - <<'PY' from pyformlang.cfg import CFG, Production, Terminal, Variable cfg1 = CFG.from_text('S -> "TER:A"') cfg2 = CFG( variables={"S"}, terminals={"A"}, start_symbol="S", productions={Production(Variable("S"), (Terminal("A"),))}, ) print(f"cfg1 prods: {cfg1.productions}") print(f"cfg2 prods: {cfg2.productions}") print(f"Prods equal? {cfg1.productions == cfg2.productions}") PY <|"|>}<tool_call|><|tool_response>

Patch, tests and logs

Final code change Included
diff --git a/pyformlang/cfg/cfg.py b/pyformlang/cfg/cfg.py
index 4a07efd..d857d6d 100644
--- a/pyformlang/cfg/cfg.py
+++ b/pyformlang/cfg/cfg.py
@@ -1081,13 +1081,19 @@ class CFG:
                     body_component = body_component[5:-1]
                 else:
                     type_component = ""
-                if body_component[0] in string.ascii_uppercase or \
-                        type_component == "VAR":
+                if type_component == "VAR":
                     body_var = Variable(body_component)
                     variables.add(body_var)
                     body.append(body_var)
-                elif body_component not in EPSILON_SYMBOLS or type_component \
-                        == "TER":
+                elif type_component == "TER":
+                    body_ter = Terminal(body_component)
+                    terminals.add(body_ter)
+                    body.append(body_ter)
+                elif body_component[0] in string.ascii_uppercase:
+                    body_var = Variable(body_component)
+                    variables.add(body_var)
+                    body.append(body_var)
+                elif body_component not in EPSILON_SYMBOLS:
                     body_ter = Terminal(body_component)
                     terminals.add(body_ter)
                     body.append(body_ter)
Test output Included
============================= test session starts ==============================
collected 290 items

pyformlang/cfg/tests/test_cfg.py ....................................... [ 13%]
........                                                                 [ 16%]
pyformlang/cfg/tests/test_llone_parser.py .............                  [ 20%]
pyformlang/cfg/tests/test_production.py .                                [ 21%]
pyformlang/cfg/tests/test_recursive_decent_parser.py ....                [ 22%]
pyformlang/cfg/tests/test_terminal.py .                                  [ 22%]
pyformlang/cfg/tests/test_variable.py .                                  [ 23%]
pyformlang/fcfg/tests/test_fcfg.py ....                                  [ 24%]
pyformlang/fcfg/tests/test_feature_structure.py ...........              [ 28%]
pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py . [ 28%]
..................                                                       [ 34%]
pyformlang/finite_automaton/tests/test_epsilon.py .                      [ 35%]
pyformlang/finite_automaton/tests/test_epsilon_nfa.py .................. [ 41%]
................                                                         [ 46%]
pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py . [ 47%]
.........                                                                [ 50%]
pyformlang/finite_automaton/tests/test_nondeterministic_transition_function.py . [ 50%]
.....                                                                    [ 52%]
pyformlang/finite_automaton/tests/test_state.py ....                     [ 53%]
pyformlang/finite_automaton/tests/test_symbol.py ....                    [ 55%]
pyformlang/finite_automaton/tests/test_transition_function.py .......    [ 57%]
pyformlang/fst/tests/test_fst.py ...........                             [ 61%]
pyformlang/indexed_grammar/tests/test_indexed_grammar.py ............... [ 66%]
.                                                                        [ 66%]
pyformlang/indexed_grammar/tests/test_rules.py .....                     [ 68%]
pyformlang/pda/tests/test_pda.py ...........                             [ 72%]
pyformlang/regular_expression/tests/test_python_regex.py ............... [ 77%]
..................................                                       [ 89%]
pyformlang/regular_expression/tests/test_regex.py ...................... [ 96%]
.....                                                                    [ 98%]
pyformlang/rsa/tests/test_rsa.py ....                                    [100%]

==================================== PASSES ====================================
- generated xml file: /tmp/rebench-grade-f2fc181c7029401ea35411998dc71e27.xml --
=========================== short test summary info ============================
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_creation
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_generating_object
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_reachable_object
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_useless_removal
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_nullable_object
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_remove_epsilon
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_unit_pair
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_cnf
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_substitution
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_union
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_concatenation
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_closure
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_pos_closure
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_reverse
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_emptiness
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_membership
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_to_pda
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_conversions
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_profiling_conversions
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_generation_words
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_generation_words2
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_finite
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_intersection
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_intersection_empty
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_intersection_dfa
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_intersection_with_epsilon
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_intersection_dfa2
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_profiling_intersection
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_pda_object_creator
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_string_variable
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_get_leftmost_derivation
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_get_rightmost_derivation
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_derivation_does_not_exist
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_derivation_empty
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_from_text
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_from_text2
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_from_text3
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_from_text_union
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_epsilon
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_epsilon2
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_generate_epsilon
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_change_starting_variable
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_is_not_normal_form
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_is_normal_form
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_to_text
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_to_text_cnf
PASSED pyformlang/cfg/tests/test_cfg.py::TestCFG::test_to_text_epsilon
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_get_first_set
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_get_first_set2
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_get_follow_set
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_get_follow_set2
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_get_llone_table
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_llone_table_non_llone
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_is_llone_parsable
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_is_not_llone_parsable
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_get_llone_parse_tree
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_get_llone_leftmost_derivation
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_get_llone_rightmost_derivation
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_save_tree
PASSED pyformlang/cfg/tests/test_llone_parser.py::TestLLOneParser::test_sentence_cfg
PASSED pyformlang/cfg/tests/test_production.py::TestProduction::test_creation
PASSED pyformlang/cfg/tests/test_recursive_decent_parser.py::TestRecursiveDecentParser::test_creation
PASSED pyformlang/cfg/tests/test_recursive_decent_parser.py::TestRecursiveDecentParser::test_get_parsing_tree
PASSED pyformlang/cfg/tests/test_recursive_decent_parser.py::TestRecursiveDecentParser::test_no_parse_tree
PASSED pyformlang/cfg/tests/test_recursive_decent_parser.py::TestRecursiveDecentParser::test_infinite_recursion
PASSED pyformlang/cfg/tests/test_terminal.py::TestTerminal::test_creation
PASSED pyformlang/cfg/tests/test_variable.py::TestVariable::test_creation
PASSED pyformlang/fcfg/tests/test_fcfg.py::TestFCFG::test_contains
PASSED pyformlang/fcfg/tests/test_fcfg.py::TestFCFG::test_contains2
PASSED pyformlang/fcfg/tests/test_fcfg.py::TestFCFG::test_state
PASSED pyformlang/fcfg/tests/test_fcfg.py::TestFCFG::test_from_text
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_creation
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_unify1
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_unify2
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_unify3
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_unify4
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_unify5
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_unify6
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_unify7
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_subsumes1
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_copy
PASSED pyformlang/fcfg/tests/test_feature_structure.py::TestFeatureStructure::test_paths
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_can_create
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_add_transition
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_add_remove_start_final
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_accepts
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_copy
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_regex
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_complement
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_big_minimize
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_big_minimize_reduce
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_minimize_repetition
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_not_cyclic
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_not_cyclic2
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_epsilon_refused
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_cyclic
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_equivalent
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_regex_dfa
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_word_generation
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_cyclic_word_generation
PASSED pyformlang/finite_automaton/tests/test_deterministic_finite_automaton.py::TestDeterministicFiniteAutomaton::test_dfa_generating_no_words
PASSED pyformlang/finite_automaton/tests/test_epsilon.py::TestEpsilon::test_epsilon
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_eclose
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_accept
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_copy
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_deterministic
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_remove_state
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_to_regex
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_to_regex2
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_to_regex3
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_union
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_concatenate
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_kleene
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_complement
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_intersection
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_difference
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_reverse
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_empty
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_minimization
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_to_fst
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_cyclic
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_export_networkx
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_import_networkx
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_iter
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_equivalent
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_non_equivalent
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_get_as_dict
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_len
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_call
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_example_doc
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_remove_epsilon_transitions
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_word_generation
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_cyclic_word_generation
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_epsilon_cycle_word_generation
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_max_length_zero_accepting_empty_string
PASSED pyformlang/finite_automaton/tests/test_epsilon_nfa.py::TestEpsilonNFA::test_max_length_zero_not_accepting_empty_string
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_creation
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_remove_initial
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_accepts
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_deterministic
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_epsilon_refused
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_word_generation
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_for_duplicate_generation
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_cyclic_word_generation
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_final_state_at_start_generation
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_finite_automaton.py::TestNondeterministicFiniteAutomaton::test_start_state_at_the_end_generation
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_transition_function.py::TestNondeterministicTransitionFunction::test_creation
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_transition_function.py::TestNondeterministicTransitionFunction::test_add_transitions
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_transition_function.py::TestNondeterministicTransitionFunction::test_number_transitions
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_transition_function.py::TestNondeterministicTransitionFunction::test_remove_transitions
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_transition_function.py::TestNondeterministicTransitionFunction::test_call
PASSED pyformlang/finite_automaton/tests/test_nondeterministic_transition_function.py::TestNondeterministicTransitionFunction::test_get_transitions_from
PASSED pyformlang/finite_automaton/tests/test_state.py::TestState::test_can_create
PASSED pyformlang/finite_automaton/tests/test_state.py::TestState::test_repr
PASSED pyformlang/finite_automaton/tests/test_state.py::TestState::test_eq
PASSED pyformlang/finite_automaton/tests/test_state.py::TestState::test_hash
PASSED pyformlang/finite_automaton/tests/test_symbol.py::TestSymbol::test_can_create
PASSED pyformlang/finite_automaton/tests/test_symbol.py::TestSymbol::test_repr
PASSED pyformlang/finite_automaton/tests/test_symbol.py::TestSymbol::test_eq
PASSED pyformlang/finite_automaton/tests/test_symbol.py::TestSymbol::test_hash
PASSED pyformlang/finite_automaton/tests/test_transition_function.py::TestTransitionFunction::test_creation
PASSED pyformlang/finite_automaton/tests/test_transition_function.py::TestTransitionFunction::test_add_transitions
PASSED pyformlang/finite_automaton/tests/test_transition_function.py::TestTransitionFunction::test_number_transitions
PASSED pyformlang/finite_automaton/tests/test_transition_function.py::TestTransitionFunction::test_remove_transitions
PASSED pyformlang/finite_automaton/tests/test_transition_function.py::TestTransitionFunction::test_call
PASSED pyformlang/finite_automaton/tests/test_transition_function.py::TestTransitionFunction::test_invalid_epsilon
PASSED pyformlang/finite_automaton/tests/test_transition_function.py::TestTransitionFunction::test_get_transitions_from
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_creation
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_translate
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_intersection_indexed_grammar
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_union
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_concatenate
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_concatenate2
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_kleene_start
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_generate_empty_word_from_nothing
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_epsilon_loop
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_epsilon_loop2
PASSED pyformlang/fst/tests/test_fst.py::TestFST::test_paper
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig_0
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig_1
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig_2
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig_3
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig_4
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig_5
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig_regular_expression
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig6
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig7
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig8
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_simple_ig9
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_start_symbol
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_reachable
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_generating
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_removal_useless
PASSED pyformlang/indexed_grammar/tests/test_indexed_grammar.py::TestIndexedGrammar::test_intersection
PASSED pyformlang/indexed_grammar/tests/test_rules.py::TestIndexedGrammar::test_consumption_rules
PASSED pyformlang/indexed_grammar/tests/test_rules.py::TestIndexedGrammar::test_duplication_rules
PASSED pyformlang/indexed_grammar/tests/test_rules.py::TestIndexedGrammar::test_end_rule
PASSED pyformlang/indexed_grammar/tests/test_rules.py::TestIndexedGrammar::test_production_rules
PASSED pyformlang/indexed_grammar/tests/test_rules.py::TestIndexedGrammar::test_rules
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_creation
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_represent
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_transition
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_example62
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_to_final_state
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_to_empty_stack
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_to_cfg
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_pda_conversion
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_intersection_regex
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_pda_object_creator_epsilon
PASSED pyformlang/pda/tests/test_pda.py::TestPDA::test_pda_paper
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_with_brackets
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_range_in_brackets
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_range_in_brackets_trap
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_range_in_brackets_trap2
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_range_in_brackets_trap2_bis
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_parenthesis
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_plus
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_dot
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_dot_spaces
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_simple_optional
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_with_parenthesis_optional
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_question_mark
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_kleene_star
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_plus
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_opening_bracket
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_closing_bracket
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_backslash
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_backslash_plus
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_backslash_opening_bracket
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_backslash_closing_bracket
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_backslash_question_mark
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_dash_in_brackets
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_special_in_brackets_opening_parenthesis
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_special_in_brackets_closing_parenthesis
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_special_in_brackets_kleene_star
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_special_in_brackets_positive_closure
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_special_in_brackets_optional
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_shortcut_digits
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_shortcut_digits_in_brackets
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_shortcut_spaces
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_space
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_shortcut_word
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_backslash
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_escape_dot
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_brackets
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_brackets_escape
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_brackets_end_range_escaped
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_brackets_backslash_middle
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_backslash2
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_octal
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_backspace
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_unicode_name
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_unicode
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_dot_harder
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_single_repetition
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_range_repetition
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_error_backslash
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_negation_brackets
PASSED pyformlang/regular_expression/tests/test_python_regex.py::TestPythonRegex::test_question_mark
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_creation
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_to_enfa0
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_to_enfa1
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_print
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_get_repr
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_accepts
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_from_python_simple
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_from_python_brackets
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_space
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_parenthesis_gorilla
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_regex_or
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_regex_or_concat
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_regex_two_or_concat
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_regex_two_or_concat_parenthesis
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_regex_two_or_concat_parenthesis2
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_regex_two_or_concat_parenthesis2_concat
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_regex_or_two_concat
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_after_union
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_star_union
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_misformed
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_misformed2
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_escaped_parenthesis
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_escaped_mid_bar
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_to_cfg
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_priority
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_backslash_b
PASSED pyformlang/regular_expression/tests/test_regex.py::TestRegex::test_backslash
PASSED pyformlang/rsa/tests/test_rsa.py::TestRSA::test_creation
PASSED pyformlang/rsa/tests/test_rsa.py::TestRSA::test_from_regex
PASSED pyformlang/rsa/tests/test_rsa.py::TestRSA::test_is_equals_to
PASSED pyformlang/rsa/tests/test_rsa.py::TestRSA::test_from_ebnf
============================= 290 passed in 1.50s ==============================
Test errors Included
Test report (JUnit) Included
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name="test_star_union" time="0.000" /><testcase classname="pyformlang.regular_expression.tests.test_regex.TestRegex" name="test_misformed" time="0.000" /><testcase classname="pyformlang.regular_expression.tests.test_regex.TestRegex" name="test_misformed2" time="0.000" /><testcase classname="pyformlang.regular_expression.tests.test_regex.TestRegex" name="test_escaped_parenthesis" time="0.000" /><testcase classname="pyformlang.regular_expression.tests.test_regex.TestRegex" name="test_escaped_mid_bar" time="0.008" /><testcase classname="pyformlang.regular_expression.tests.test_regex.TestRegex" name="test_to_cfg" time="0.001" /><testcase classname="pyformlang.regular_expression.tests.test_regex.TestRegex" name="test_priority" time="0.001" /><testcase classname="pyformlang.regular_expression.tests.test_regex.TestRegex" name="test_backslash_b" time="0.000" /><testcase classname="pyformlang.regular_expression.tests.test_regex.TestRegex" name="test_backslash" time="0.000" /><testcase classname="pyformlang.rsa.tests.test_rsa.TestRSA" name="test_creation" time="0.001" /><testcase classname="pyformlang.rsa.tests.test_rsa.TestRSA" name="test_from_regex" time="0.000" /><testcase classname="pyformlang.rsa.tests.test_rsa.TestRSA" name="test_is_equals_to" time="0.001" /><testcase classname="pyformlang.rsa.tests.test_rsa.TestRSA" name="test_from_ebnf" time="0.003" /></testsuite></testsuites>
Agent log Included
  [   0.0s] 📋 System Prompt: You are a principal Python software engineer resolving a repository issue in `/workspace`.
  [   0.0s] 🎯 Task Prompt: You are evaluating a software engineering task for repository Aunsiels/pyformlang.
  [  20.2s] 💭 (222 chars) "The user is reporting a bug in `pyformlang.cfg.CFG.from_text`.
Specifically, `TER:X` notation (where X is a terminal) is..."
  [  20.2s] 🔧 run_command (22 lines) python3 - <<'PY'
  [  21.0s]   → Case 1: from_text
  [  47.7s] 💭 (707 chars) "Wait, the output is a bit weird.
`Case 1: from_text` -> `productions: {S -> A}`.
Wait, `S -> A`. Is `A` a Variable or a ..."
  [  47.7s] 🔧 run_command (16 lines) python3 - <<'PY'
  [  48.0s]   → error (exit 0): 
  [  53.3s] 💭 (150 chars) "My apologies, I assumed `Production` had `left` and `right` attributes. Let me check the 
definition of `Production` in `..."
  [  53.3s] 📖 read_file (pyformlang/cfg/production.py)
  [  53.3s]   ✓ {'status': 'ok', 'filepath': 'pyformlang/cfg/production.py', 'content': '""" A production or rule of a 
CFG """\nfrom typ…
  [  61.0s] 💭 (82 chars) "Okay, the attributes are `head` and `body`. Let me re-run the reproduction script."
  [  61.0s] 🔧 run_command (16 lines) python3 - <<'PY'
  [  61.3s]   → Prod: S -> A, LHS: <class 'pyformlang.cfg.variable.Variable'>, RHS: [<class 
'pyformlang.cfg.variable.Variable'>]
  [  71.6s] 💭 (360 chars) "Aha!
In `cfg1 = CFG.from_text('S -> "TER:A"')`, the RHS is `[<class 'pyformlang.cfg.variable.Variable'>]`.
So `"TER:A"` ..."
  [  71.6s] 📖 read_file (pyformlang/cfg/cfg.py)
  [  71.7s]   ✓ {'status': 'ok', 'filepath': 'pyformlang/cfg/cfg.py', 'content': '""" A context free grammar """\nimport
string\nfrom co…
  [  81.8s] 💭 (365 chars) "I see `is_special_text` function at line 26.

```python
def is_special_text(text):
    """ Check if the input is given a..."
  [  81.8s] 🔧 run_command grep -n "def from_text" pyformlang/cfg/cfg.py
  [  81.8s]   → 1028:    def from_text(cls, text, start_symbol=Variable("S")):
  [  86.9s] 💭 (50 chars) "Let's read `from_text` in `pyformlang/cfg/cfg.py`."
  [  86.9s] 📖 read_file (pyformlang/cfg/cfg.py\", start_line: 1020, end_line: 1106%)
  [  86.9s]   ❌ {'status': 'error', 'error_type': 'FileReadError', 'error_message': '404 Client Error for 
http+docker://localhost/v1.52/…
  [  92.1s] 💭 (117 chars) "I made a mistake in the `filepath` argument of `read_file`. I accidentally included the 
trailing `%` and some quotes."
  [  92.1s] 📖 read_file (pyformlang/cfg/cfg.py)
  [  92.1s]   ✓ {'status': 'ok', 'filepath': 'pyformlang/cfg/cfg.py', 'content': '        """\n        res = []\n       
for production …
  [ 332.4s] 💭 (14621 chars) "I found the bug! Look at `_read_line`:

```python
    @classmethod
    def _read_line(cls, line, productions, terminals,..."
  [ 332.4s] ✏️ edit_file (pyformlang/cfg/cfg.py)
  [ 332.5s]   ✓ {'status': 'ok', 'filepath': 'pyformlang/cfg/cfg.py', 'occurrences': 1, 'strategy': 'exact', 'diff': 
'--- a/pyformlang/c…
  [ 342.9s] 💭 (54 chars) "Now let's verify the fix with the reproduction script."
  [ 342.9s] 🔧 run_command (22 lines) python3 - <<'PY'
  [ 343.2s]   → Case 1: from_text
  [ 364.5s] 💭 (316 chars) "Wait, `Are they equal? False`. Why?
`cfg1` and `cfg2` both have `productions: {S -> Terminal(A)}`.
Ah, let's look at the..."
  [ 364.5s] 🔧 run_command (20 lines) python3 - <<'PY'
  [ 364.8s]   → cfg1 variables: {Variable(S)}
  [ 432.5s] 💭 (403 chars) "Wait, why are they not equal?
Let's look at `pyformlang/cfg/cfg.py` to see `__eq__`.

Actually, maybe it's because I'm c..."
  [ 432.5s] 🔧 run_command (15 lines) python3 - <<'PY'
  [ 432.8s]   → cfg1 prods: {S -> Terminal(A)}
Native result row
{
  "agent_error": "Agent exceeded session timeout (7.5 min)",
  "duration_seconds": 455.21,
  "error": "Agent exceeded session timeout (7.5 min)",
  "grade": {
    "collected_tests": 290,
    "competition_junit_ok": true,
    "error": null,
    "required_issues_count": 0,
    "resolved": true,
    "status_counts": {
      "PASSED": 290
    },
    "strict_clean_patch": true,
    "test_exit_code": 0
  },
  "instance_id": "Aunsiels__pyformlang-32",
  "pass_idx": 0,
  "patch_chars": 1337,
  "phase1_seconds": 452.75,
  "repo": "Aunsiels/pyformlang",
  "request_log_path": "/kaggle-root/working/r31/rollouts_X/requests/Aunsiels__pyformlang-32__p0__r5.jsonl",
  "resolved": true,
  "rollout_idx": 5,
  "run_key": "Aunsiels__pyformlang-32__p0__r5",
  "strict_clean_patch": true,
  "tool_calls": 12,
  "total_llm_calls": 12,
  "trace_path": "/kaggle-root/working/r31/rollouts_X/traces/trace_Aunsiels__pyformlang-32__p0__r5.json"
}