Turn 5 · gemini

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/BRIEF.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read BRIEF.md on wrx90"}:
Lssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/BRIEF.md'
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/2/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:19:39-05:00
Completed At: 2026-11-13T14:19:40-05:00
Command exited with code 0.

Command output:
# wsp31 author brief (read fully at the start of every turn)

You are one of three authors (claude, gpt, gemini) taking turns. Your job: make Gemma 4 31B solve more coding-agent
tasks **by editing its weights, with no training**. You read the model (weights, activations, traces, failures),
decide what to change, build the change as a closed-form edit, predict its effect, and queue it. A separate runner
spends the rollouts and writes the measured result next to your prediction. You are scored on tasks gained over the
champion in the same batch (the unedited model plus the edits that have already passed; see "The champion"), on the
margin over your matched control, and on how well your predictions held.

**Be bold.** Small safe nudges were tried on the 4B model and were lost in the noise (see `PRIOR_E4B.md`). You get
[... 345 lines cut ...]
  edits that already passed needs nothing from you: that is what the champion does.

Single-run agent evaluations are noisy by several tasks. An edit worth having shows up as ten or more tasks.
Aim there.
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2Lssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/BRIEF.md':%C:\Users\Owner\wsp31_loop\work\gemini:~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/2/output.txt

{"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\2\\output.txt","StartLine":60}:
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\2\output.txt
~
{Created At: 2026-11-13T14:19:52-05:00
Completed At: 2026-11-13T14:19:52-05:00
Showing lines 60-239 of 239
60:   episode: `instance_id`, `resolved`, `tool_calls`, `duration_seconds`, `patch_chars`, `trace_path`, `grade`).
61:   Read traces of failures. Look for what the model does wrong that a weight change could plausibly fix.
62: - Batch `b001` is three identical unedited arms (`base`, `aa`, `zero`) at two streams each; they solved 60, 60 and
63:   65 of 120. Those are the cleanest unedited traces. The older `base/s1_base` run (59 episodes) was served at 16 streams and
64:   a third of its episodes ran into the time limit, so its failures over-state "ran out of time".
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67:   thinking and the tool name.
68: 
69: ## State of the rig (read `STATUS.md` for the live version)
70: 
71: - **GPU 1 is never yours.** It runs the screening batches. You use GPU 0 only, only through the wrapper in
72:   `TOOLS.md`, and you share its lock with two tool-building lanes, so a hold can start late: do CPU work first,
73:   take the GPU when you know exactly what you will run, and never hold it idle. No screening batch starts on GPU 0
[... 161 lines cut ...]
235: - A combination of your own edits is a new queue entry with its own record, prediction and control. Combining with
236:   edits that already passed needs nothing from you: that is what the champion does.
237: 
238: Single-run agent evaluations are noisy by several tasks. An edit worth having shows up as ten or more tasks.
239: Aim there.
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/2/output.txt
2type.googleapis.com/exa.cortex.core.tools.ReadFile
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\2\output.txt <(

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md; echo \"=== RESULTS.MD ===\"; cat /home/keith/gemma-v2/wsp31/authors/gemini/RESULTS.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read NOTES.md and RESULTS.md on wrx90"}2
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md; echo "=== RESULTS.MD ==="; cat /home/keith/gemma-v2/wsp31/authors/gemini/RESULTS.md'
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/5/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:19:52-05:00
Completed At: 2026-11-13T14:19:54-05:00
Command exited with code 0.

Command output:
# Gemini Working Notes (Turn 2)

## Empirical `b001` Failure Diagnosis (210 unedited episodes, 71 tasks; 108/210 = 51.4% solved)
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2. **30-tool-call cap / pre-edit `read_file` spirals (`21+` empty-budget/late-edit failures; 5/10 within-task discordant tasks)**: Solved runs average `5.48` `read_file` calls and edit on call `10.3` (`108/108` edit). Failing discordant arms (`kayak__pypika`, `[task]`, `mozilla__bleach`, `[task]`) often have `200s+` left (`max_think = 787`--`1270`), read 20-line slices `14`--`17` times until `BudgetExceeded` at call 30 blocks `edit_file` and forces `submit_patch` (`patch_size: 0`).

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- **31B MLP gates need coordinate whitening, band selection, and `L59` norm caps**: `pre_feedforward_layernorm` outlier gains skew raw ridge gates; whitening by fit-set coordinate RMS + zero-centering `w_tool` on tool points + restricting to high-signal bands (`L30..39` and `L57..59`, skipping flat `L40..56`) lifts held-out late-pre-edit AUC from `0.53` to `0.73` (`0.96` vs non-tool, `0.0019` thought leak). Always cap `down_proj` column writes (`<= 5.5% ||W||_F`) because pre-norm `mlp_raw_rms[59]` is huge.
- **Single-neuron GeLU negative dip (`[-1.8, 0]`)**: Even with `neg_arg`/`neg_other` below `-4.5`, non-firing tool calls sitting in `[-1.8, 0]` emit `gelu_tanh ~ -0.15`, partially inverting tail `edit` log-probs on marginal calls (`f3_d12`). In Turn 3, use **2-neuron exact ReLU cancellation** (`a = gelu_tanh(g)*g` or paired `+d/-d` neurons) to eliminate the negative trough completely.
[... 133 lines cut ...]
| 0022 | claude | net-preedit-commit-b12 | Pre-edit commit gate in all 60 layers: deep in a thought with no edit made yet, write the first-edit thought state only (per-layer dose 0.12 | parked | -7 to +7 |  |  | - |
| 0023 | claude | net-preedit-commit-close-b05 | Pre-edit rumination gate in all 60 layers: deep in a thought with no edit made yet, write end-of-thought plus first-edit state (per-layer do | parked | -8 to +9 |  |  | - |
| 0025 | gpt | code-writer-damp-r4-033 | Damp the code-versus-prose style contrast in writers in all layers at 0.33 percent | queued_s1 | -6 to +12 |  |  | - |
| 0026 | gpt | code-writer-damp-r4-011 | Damp the code-versus-prose style contrast in writers in all layers at 0.11 percent | queued_s1 | -5 to +10 |  |  | - |
| 0027 | gpt | code-reader-damp-r4-033 | Damp the code-versus-prose style contrast in readers in all layers at 0.33 percent | parked | -8 to +14 |  |  | - |
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md; echo "=== RESULTS.MD ==="; cat /home/keith/gemma-v2/wsp31/authors/gemini/RESULTS.md':%C:\Users\Owner\wsp31_loop\work\gemini:~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/5/output.txt

{"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps/5/output.txt","StartLine":50}:
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps/5/output.txt
Created At: 2026-11-13T14:20:10-05:00
Completed At: 2026-11-13T14:20:10-05:00
Showing lines 50-79 of 79
50: ## Your entries still being screened
51: 
52: - 0015 `exact-close-r4-subspace`: queued_s2
53: 
54: ## Your parked entries (not screened)
55: 
56: To put one back as an entry of this round, create an empty file `RESUBMIT` in its queue directory. It is served from the frozen copy, unchanged; a changed edit is a new entry under a new slug.
57: 
58: - 0016 `rumination-damp-r2-net`: Subtractive rank-2 deep-rumination attractor damping across all 280 mid-to-late modules (0.36%)
59: - 0017 `late-preedit-commit-gate`: Coordinate-whitened GeGLU late pre-edit commit gate across 13 high-signal layers (dose 1.20)
60: - 0018 `dual-budget-rescue-r5`: Dual-cap rescue stack: rank-4 exact-close writer subspace (0.38%) plus 13-layer late pre-edit commit gate
61: 
62: ## The other authors' entries
63: 
64: | ledger | author | slug | title | state | predicted (120) | stage 1 (edit vs reference solved) | stage 2 | verdict |
[... 10 lines cut ...]
75: | 0022 | claude | net-preedit-commit-b12 | Pre-edit commit gate in all 60 layers: deep in a thought with no edit made yet, write the first-edit thought state only (per-layer dose 0.12 | parked | -7 to +7 |  |  | - |
76: | 0023 | claude | net-preedit-commit-close-b05 | Pre-edit rumination gate in all 60 layers: deep in a thought with no edit made yet, write end-of-thought plus first-edit state (per-layer do | parked | -8 to +9 |  |  | - |
77: | 0025 | gpt | code-writer-damp-r4-033 | Damp the code-versus-prose style contrast in writers in all layers at 0.33 percent | queued_s1 | -6 to +12 |  |  | - |
78: | 0026 | gpt | code-writer-damp-r4-011 | Damp the code-versus-prose style contrast in writers in all layers at 0.11 percent | queued_s1 | -5 to +10 |  |  | - |
79: | 0027 | gpt | code-reader-damp-r4-033 | Damp the code-versus-prose style contrast in readers in all layers at 0.33 percent | parked | -8 to +14 |  |  | - |
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/5/output.txt
2type.googleapis.com/exa.cortex.core.tools.ReadFile
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps/5/output.txt 2(O0

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/queue/STATUS.md; echo \"=== CHAMPION.MD ===\"; cat /home/keith/gemma-v2/wsp31/queue/CHAMPION.md; echo \"=== LEDGER.MD ===\"; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/LEDGER.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read STATUS.md, CHAMPION.md, and LEDGER.md"}2
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/queue/STATUS.md; echo "=== CHAMPION.MD ==="; cat /home/keith/gemma-v2/wsp31/queue/CHAMPION.md; echo "=== LEDGER.MD ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/LEDGER.md'
*Read STATUS.md, CHAMPION.md, and LEDGER.md
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/8/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:20:10-05:00
Completed At: 2026-11-13T14:20:12-05:00
Command exited with code 0.

Command output:
# wsp31 queue status (2026-11-13 14:20:04 EST)

Rule: {"s1_promote": 3.0, "s1_harmful": -6.0, "s2_min": 4.0, "ctrl_margin": 5.0, "total_pass": 10.0, "total_harmful": -10.0}

Champion (the base every new edit is scored against): Generation 0: the unedited model. No edit has passed yet.

## Batches

| batch | stage | gpu | state | arms | rows | note |
[... 170 lines cut ...]
| [0023](ledger/0023-claude-net-preedit-commit-close-b05.md) | 2026-11-13 | claude | edit | Pre-edit rumination gate in all 60 layers: deep in a thought with no edit made yet, write end-of-thought plus first-edit state (per-layer do | wsp31_screen_v1 / - | parked | - | - |
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| [0025](ledger/0025-gpt-code-writer-damp-r4-033.md) | 2026-11-13 | gpt | edit | Damp the code-versus-prose style contrast in writers in all layers at 0.33 percent | wsp31_screen_v1 / - | queued | - | - |
| [0026](ledger/0026-gpt-code-writer-damp-r4-011.md) | 2026-11-13 | gpt | edit | Damp the code-versus-prose style contrast in writers in all layers at 0.11 percent | wsp31_screen_v1 / - | queued | - | - |
| [0027](ledger/0027-gpt-code-reader-damp-r4-033.md) | 2026-11-13 | gpt | edit | Damp the code-versus-prose style contrast in readers in all layers at 0.33 percent | wsp31_screen_v1 / - | parked | - | - |
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/queue/STATUS.md; echo "=== CHAMPION.MD ==="; cat /home/keith/gemma-v2/wsp31/queue/CHAMPION.md; echo "=== LEDGER.MD ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/LEDGER.md':%C:\Users\Owner\wsp31_loop\work\gemini:~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/8/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/RESULTS.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read full RESULTS.md on wrx90"}:
Ussh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/RESULTS.md'
r
7Created At: 2026-11-13T14:20:33-05:00
Completed At: 2026-11-13T14:20:35-05:00
Command exited with code 0.

Command output:
# Results for author gemini (2026-11-13 14:19:27 EST)

Written by the runner as your turn opens. "New" means scored since your last turn started (2026-11-12 22:46:01 EST). The full result text of every entry is in its ledger record (`tii-wsp31-doc/research/wsp31/ledger/<id>-*.md`, index `LEDGER.md` next to that directory); the live queue is `wsp31/queue/STATUS.md`.

## Your new results

### 0015 `exact-close-r4-subspace`: Spectral rank-4 exact-context within-call thought-close writer subspace across all 60 layers (0.38%)

State queued_s2, verdict -; predicted stage-1 gain -4 to +11; record `tii-wsp31-doc/research/wsp31/ledger/0015-gemini-exact-close-r4-subspace.md`.

**Stage 1**, batch `b003` (finished 2026-11-13 14:17:01 EST), reference arm: unedited.

[... 91 lines cut ...]
| 0025 | gpt | code-writer-damp-r4-033 | Damp the code-versus-prose style contrast in writers in all layers at 0.33 percent | queued_s1 | -6 to +12 |  |  | - |
| 0026 | gpt | code-writer-damp-r4-011 | Damp the code-versus-prose style contrast in writers in all layers at 0.11 percent | queued_s1 | -5 to +10 |  |  | - |
| 0027 | gpt | code-reader-damp-r4-033 | Damp the code-versus-prose style contrast in readers in all layers at 0.33 percent | parked | -8 to +14 |  |  | - |
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2Ussh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/RESULTS.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/10/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/TOOLS.md; echo \"=== INTERP REPORT ===\"; head -n 80 /home/keith/gemma-v2/wsp31/interp/REPORT.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read TOOLS.md and interp/REPORT.md header"}2
)Read TOOLS.md and interp/REPORT.md header
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/TOOLS.md; echo "=== INTERP REPORT ==="; head -n 80 /home/keith/gemma-v2/wsp31/interp/REPORT.md'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/11/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:20:33-05:00
Completed At: 2026-11-13T14:20:37-05:00
Command exited with code 0.

Command output:
# wsp31 tools for edit authors

Changelog (newest first; times US Eastern):
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  the first version got -1.4 to +0.65 of the wanted move). **Pre-test defaults: the complete b001 sets** (section 6).
- Fri 13 Nov, 12:39 AM: speed with repeats (trap 12): **the server's rank limit sets the price of an adapter**.
- Thu 12 Nov: 11:40 PM first served runs of `dose.py`, `validate.py`, `vgen.py`, `closeprobe.py`; 10:55 PM stacks
  of rank 34 to 96 applied as written; 10:30 PM **thought-end pre-tests need exact contexts**, rank limits 64 or 128
[... 485 lines cut ...]
  prediction (amendment 5h) and is not scored yet. If you tune an edit on these points, the count becomes a
  target and stops being a prediction; calls are logged (`interp/logs/flipcount_calls.jsonl`) so that the lane
  can tell such entries apart (amendment 5j). Section 3.7.

2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/TOOLS.md; echo "=== INTERP REPORT ==="; head -n 80 /home/keith/gemma-v2/wsp31/interp/REPORT.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/11/output.txt

{"EndLine":380,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\11\\output.txt","StartLine":65}:
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\11\output.txt
Created At: 2026-11-13T14:20:51-05:00
Completed At: 2026-11-13T14:20:52-05:00
Showing lines 65-380 of 389
65: 
66: ## 2. Building an edit and its matched control
67: 
68: `edits.py` (CPU; reads the dequantised weights straight from the checkpoint):
69: 
70:     import sys; sys.path.insert(0, "/home/keith/gemma-v2/wsp31/tools")
71:     from edits import EditSet
72:     e = EditSet()                            # EditSet(champion="current"): design against the champion (section 4)
73:     W = e.W(41, "o_proj")                    # weight [out, in] fp32 (norms: use .double())
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75:     e.norm(30, "pre_feedforward_layernorm")  # norm weights; also "layer_scalar" (read-only: not editable by LoRA)
76:     e.row_add(30, "gate_proj", 123, delta)   # dW[123, :] += delta   (what neuron 123 of layer 30 reads; len 5376)
77:     e.col_add(30, "down_proj", 123, delta)   # dW[:, 123] += delta   (what it writes; len 5376)
78:     e.neuron(30, 123, gate=g, up=u, down=d, mode="add"|"set")       # all three vectors of one neuron
79:     e.neuron_scale(30, 123, down=0.0)        # scale a neuron's rows/column; down=0 ablates it
[... 296 lines cut ...]
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378:   from an identical-weight arm, and three identical-weight arms solved 60, 60 and 65 of 120 in b001. It is not
379:   proof of no change: about 1000 of 121,831 positions are measured.
380: - **Limits.** Not validated: the checks V1 to V3 of amendment 3o run in the lane's first hold, and nothing of this
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/11/output.txt
2type.googleapis.com/exa.cortex.core.tools.ReadFile
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\11\output.txt A(

{"CommandLine":"ssh -o BatchMode=yes wrx90 'ls -la /home/keith/gemma-v2/wsp31/authors/gemini /home/keith/gemma-v2/wsp31/authors/gemini/code /home/keith/gemma-v2/wsp31/authors/gemini/queue /home/keith/gemma-v2/wsp31/authors/gemini/scratch'","WaitMsBeforeAsync":10000,"toolSummary":"List gemini directory contents on wrx90"}2
ssh -o BatchMode=yes wrx90 'ls -la /home/keith/gemma-v2/wsp31/authors/gemini /home/keith/gemma-v2/wsp31/authors/gemini/code /home/keith/gemma-v2/wsp31/authors/gemini/queue /home/keith/gemma-v2/wsp31/authors/gemini/scratch'
'List gemini directory contents on wrx90
Created At: 2026-11-13T14:20:52-05:00
Completed At: 2026-11-13T14:20:54-05:00
Command exited with code 0.

Command output:
/home/keith/gemma-v2/wsp31/authors/gemini:
total 36
drwxrwxr-x 5 keith keith 4096 Nov 13 09:13 .
drwxrwxr-x 5 keith keith 4096 Nov 12 22:46 ..
-rw-rw-r-- 1 keith keith   11 Nov 13 14:19 .turn_start
-rw-rw-r-- 1 keith keith 3757 Nov 12 23:55 NOTES.md
-rw-rw-r-- 1 keith keith 7031 Nov 13 14:19 RESULTS.md
drwxrwxr-x 4 keith keith 4096 Nov 12 23:54 code
drwxrwxr-x 6 keith keith 4096 Nov 12 23:52 queue
drwxrwxr-x 2 keith keith 4096 Nov 12 23:54 scratch

/home/keith/gemma-v2/wsp31/authors/gemini/code:
[... 105 lines cut ...]
-rw-rw-r-- 1 keith keith  52153 Nov 12 23:53 size_dual-budget-rescue-r5.json
-rw-rw-r-- 1 keith keith  44282 Nov 12 23:45 size_exact-close-r4-subspace.json
-rw-rw-r-- 1 keith keith  12849 Nov 12 23:52 size_late-preedit-commit-gate.json
-rw-rw-r-- 1 keith keith 102399 Nov 12 23:48 size_rumination-damp-r2-net.json
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'ls -la /home/keith/gemma-v2/wsp31/authors/gemini /home/keith/gemma-v2/wsp31/authors/gemini/code /home/keith/gemma-v2/wsp31/authors/gemini/queue /home/keith/gemma-v2/wsp31/authors/gemini/scratch':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/14/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0015-gemini-exact-close-r4-subspace.md; echo \"=== 0008 ===\"; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0008-claude-deep-thought-gate-g3-b03.md; echo \"=== 0011 ===\"; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0011-gpt-writer-close-amplify-033.md; echo \"=== 0012 ===\"; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0012-gpt-writer-close-amplify-050.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read ledger records 0015, 0008, 0011, 0012"}:
*Read ledger records 0015, 0008, 0011, 0012
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0015-gemini-exact-close-r4-subspace.md; echo "=== 0008 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0008-claude-deep-thought-gate-g3-b03.md; echo "=== 0011 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0011-gpt-writer-close-amplify-033.md; echo "=== 0012 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0012-gpt-writer-close-amplify-050.md'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/16/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:21:12-05:00
Completed At: 2026-11-13T14:21:14-05:00
Command exited with code 0.

Command output:
---
id: 0015
date: 2026-11-12
author: gemini
track: edit
title: Spectral rank-4 exact-context within-call thought-close writer subspace across all 60 layers (0.38%)
status: running
set: wsp31_screen_v1
batch: b003
[... 744 lines cut ...]

## Verdict and notes

harmful by the fixed rule: stage-1 gain -21.0, bar +3, harmful at -6 or below.
(
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0015-gemini-exact-close-r4-subspace.md; echo "=== 0008 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0008-claude-deep-thought-gate-g3-b03.md; echo "=== 0011 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0011-gpt-writer-close-amplify-033.md; echo "=== 0012 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0012-gpt-writer-close-amplify-050.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/16/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/ARCH.md; echo \"=== PRIOR_E4B ===\"; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/PRIOR_E4B.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read ARCH.md and PRIOR_E4B.md"}2
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/ARCH.md; echo "=== PRIOR_E4B ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/PRIOR_E4B.md'
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/17/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:21:13-05:00
Completed At: 2026-11-13T14:21:16-05:00
Command exited with code 0.

Command output:
# Gemma 4 31B (QAT w4a16) architecture, as served

Source: `config.json` and the safetensors header of `/home/keith/gemma-v2/models/gemma-4-31b-it-qat-w4a16-ct`
(one file, 23.27 GB, 2009 tensors) and the vLLM 0.19.1 model code that serves it
(`vllm/model_executor/models/gemma4.py`). The lane's forward pass `g31.py` implements exactly this graph; its
agreement with the server is measured in `REPORT.md`.

## Sizes

| item | value |
[... 345 lines cut ...]
3. Greedy decoding was not repeatable run to run on the serving stack. Identical-arm noise is measured, not assumed.
4. Early batches flattered an edit (+4.3) and later ones did not (+1.1). Replication is part of the pass rule.
5. Steering the amount of exploration, thinking or verification up or down was mostly neutral or harmful on E4B.
   The largest measured loss was edits made against stale file text, which no edit reduced.
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/ARCH.md; echo "=== PRIOR_E4B ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/PRIOR_E4B.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/17/output.txt

{"EndLine":450,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\16\\output.txt","StartLine":75}:
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\16\output.txt
Created At: 2026-11-13T14:21:30-05:00
Completed At: 2026-11-13T14:21:30-05:00
Showing lines 75-450 of 805
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76: 
77: ### edit: exact per-call `closeprobe` thought-end pre-test (`closeprobe.py`, NOT VERIFIED YET in `TOOLS.md`)
78: 
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80: 
81: | kind | depth band | n | base log p(close) | arm log p(close) | delta log p(close) | top=close base -> arm | d_logp(logged) |
82: |---|---|---:|---:|---:|---:|---:|---:|
83: | close | all | 16 | -0.259 | -0.085 | +0.174 | 0.938 -> 0.938 | +0.1742 |
84: | close | depth<200 | 8 | -0.327 | -0.168 | +0.159 | 0.875 -> 0.875 | +0.1590 |
85: | close | 200..799 | 5 | -0.076 | -0.003 | +0.074 | 1.000 -> 1.000 | +0.0735 |
86: | close | 800+ | 3 | -0.383 | -0.001 | +0.383 | 1.000 -> 1.000 | +0.3827 |
87: | cont | all | 92 | -19.372 | -25.361 | -5.989 | 0.000 -> 0.011 | -0.2276 |
88: | cont | depth<200 | 58 | -19.077 | -24.421 | -5.344 | 0.000 -> 0.017 | -0.2781 |
89: | cont | 200..799 | 31 | -20.159 | -26.877 | -6.718 | 0.000 -> 0.000 | -0.1348 |
[... 356 lines cut ...]
446: 
447: ### edit: all-newline replay, NOT VERIFIED YET
448: 
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450:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/16/output.txt
2type.googleapis.com/exa.cortex.core.tools.ReadFile
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\16\output.txt K(

{"CommandLine":"ssh -o BatchMode=yes wrx90 'sed -n \"81,350p\" /home/keith/gemma-v2/wsp31/interp/REPORT.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read interp/REPORT.md lines 81-350"}2
Yssh -o BatchMode=yes wrx90 'sed -n "81,350p" /home/keith/gemma-v2/wsp31/interp/REPORT.md'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/20/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:21:30-05:00
Completed At: 2026-11-13T14:21:32-05:00
Command exited with code 0.

Command output:
## New for edit authors (8:22 AM ET, Fri 13 Nov 2026): screening decodes greedily; how much thinking lies deep in a thought

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  does nothing in a screening rollout unless it becomes the largest there: the unedited value at such points is
  0.0012, and the confirmed `close_thought` push of 1% per layer brings it to 0.113 on average. Design and
[line removed by the dashboard scrubber]
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[... 379 lines cut ...]

### Q2. Can a reader tell a real neuron from a control card? (family B, PILOT, chance 50%, 20 items per kind)

2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2Yssh -o BatchMode=yes wrx90 'sed -n "81,350p" /home/keith/gemma-v2/wsp31/interp/REPORT.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/20/output.txt

{"EndLine":250,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\20\\output.txt","StartLine":60}:
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\20\output.txt
Created At: 2026-11-13T14:21:44-05:00
Completed At: 2026-11-13T14:21:44-05:00
Showing lines 60-250 of 275
60: the coherence bar (KL 0.21 and 0.77 nat). At 2% per layer it does not (KL 5.1 and 6.7 nat). Details: section 3.5.
61: 
62: What this is not: it is a hooked forward pass, not a weight edit and not a rollout. No thought length and no task
[line removed by the dashboard scrubber]
64: thoughts sooner gains tasks is the subject of the block below, which says the ceiling is small.
65: 
66: ## For edit authors: what costs tasks in the unedited model (read this before designing an edit)
67: 
68: Status of every number in this block: unedited arms only (`results/wsp31/base/s1_base` and the `base`, `aa` and
69: `zero` arms of batch b001; no edit arm was read), counted on CPU from traces and outcomes as they stood at 12:26
70: AM ET, Fri 13 Nov (374 episodes on 130 tasks; b001 was still filling). The b001 counts are **post hoc and interim
71: until b001 is scored**; the scoring of the batch under ledger record 0003 is the coordinator's and is not
72: anticipated here. Nothing in this block is a causal test. Tables and commands: section 2.1.
73: 
74: 1. **Whether a task gets solved is mostly a property of the task, not of the run.** 103 stage-1 tasks have three
[... 171 lines cut ...]
246: at n 24. Readers equal the mechanical rule M-in. By layer band (A-proc correct of 6, claude / codex / M-in):
247: 0-14: 4 / 4 / 4; 15-29: 3 / 4 / 2; 30-44: 0 / 0 / 1; 45-59: 3 / 2 / 2. agy: no family-A answer (not reached).
248: Superseded by the scale-up above, which is the confirmatory run.
249: 
250: **Added 7:44 AM ET, Fri 13 Nov 2026: the third reader on family B, and which scoring file is final.** The agy reader finished the
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/20/output.txt
2type.googleapis.com/exa.cortex.core.tools.ReadFile
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\20\output.txt <(

{"CommandLine":"ssh -o BatchMode=yes wrx90 'sed -n \"351,600p\" /home/keith/gemma-v2/wsp31/interp/REPORT.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read interp/REPORT.md lines 351-600"}2
Zssh -o BatchMode=yes wrx90 'sed -n "351,600p" /home/keith/gemma-v2/wsp31/interp/REPORT.md'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/23/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:21:44-05:00
Completed At: 2026-11-13T14:21:46-05:00
Command exited with code 0.

Command output:
| kind (control) | claude | codex | agy | M-maxz | M-overlap |
|---|---|---|---|---|---|
| B1 chimera: read side of neuron p with write side of neuron q | 10/20, 50% [27.2, 72.8], p 0.59 | 8/20, 40% [19.1, 63.9], p 0.87 | 2/3 | 9/20 | all 20 tied |
| B2 permuted residual coordinates | 20/20, 100% [83.2, 100], p 1e-6 | 20/20, 100% [83.2, 100], p 1e-6 | 0/0 | 17/20, 85% [62.1, 96.8] | all 20 tied |

No criterion beyond "above chance" was fixed for B. B2: met by both readers (readers vs M-maxz 3 / 0, p 0.25).
**B1: null for both readers.** agy answered 3 of the 6 B calls it was given; 3 were empty after three attempts each
(excluded by amendment 2, counted here). Scale-up: above.

### Q3, Q4. Causal prediction at tool decisions (family C) and locate (family D)
[... 348 lines cut ...]
[line removed by the dashboard scrubber]
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[line removed by the dashboard scrubber]
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2Zssh -o BatchMode=yes wrx90 'sed -n "351,600p" /home/keith/gemma-v2/wsp31/interp/REPORT.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/23/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'sed -n \"601,950p\" /home/keith/gemma-v2/wsp31/interp/REPORT.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read interp/REPORT.md lines 601-950"}:
Zssh -o BatchMode=yes wrx90 'sed -n "601,950p" /home/keith/gemma-v2/wsp31/interp/REPORT.md'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/25/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:22:02-05:00
Completed At: 2026-11-13T14:22:03-05:00
Command exited with code 0.

Command output:
  re-rendered; agreement on an edited model: not measured beyond the tools lane's rank-4 comparison.
  Q5 uses the unedited model only; the dose check (Q5c) intervenes inside the pass through hooks, which
  has no served counterpart. This lane's own pass (`g31.py`, ground truth of families A and B and of the
  atlas, Q1 and Q2): not compared with the served model or with the tools pass; checked so far: dequantised
  weights equal the reference dequantiser, identity hooks leave logits unchanged. Q1, Q2 and the atlas line
  above depend on that comparison.
- Q5: tool_submit (no check positives). Q5c: the registered grid (close_thought, tool_act) and the clean-control runs (close_thought only) exist for
  layers 0-59; tool_act with the clean control, the layer sets 20-59 and 30-48, and finished and solved are
[line removed by the dashboard scrubber]
  episodes; no weight edit, rollout, thought length or task outcome was measured. The dose check intervenes through hooks in the tools lane's pass; no served counterpart.
[... 459 lines cut ...]
Exploratory, unedited arms only (`s1_base` and b001 base, aa, zero), `dirs/episodes_v3.json` (407 episodes with a
trace), `python dirs/wrong_patch_v2.py` (log `logs/wrong_patch_v2.out`, result `dirs/out/wrong_patch_v2.json`; the corrected script, see the correction below). W = finished,
non-empty patch, not solved: 96 episodes on 47 tasks. S = finished and solved: 191 episodes on 75 tasks. The b001
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2Zssh -o BatchMode=yes wrx90 'sed -n "601,950p" /home/keith/gemma-v2/wsp31/interp/REPORT.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/25/output.txt

[line removed by the dashboard scrubber]
,Read ledger records 0020, 0024, 0025 headers
[line removed by the dashboard scrubber]
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/26/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:22:02-05:00
Completed At: 2026-11-13T14:22:05-05:00
Command exited with code 0.

Command output:
---
id: 0020
date: 2026-11-13
author: claude
track: edit
title: Deep-thought gate in all 60 layers: one neuron per layer detects depth >= 800 in a thought and writes the end-of-thought state (per-layer do
status: running
set: wsp31_screen_v1
batch: b004
[... 319 lines cut ...]
Audit motivation: b001 has 700 edit_file calls, 541 captured status=ok responses, 49 captured status=error responses, and 110 without a captured response; 34 errors mention string matching. The first loose text scan also matched source-code strings, so only parsed tool status counts are used (code/turn4/edit_error_audit.json). Two failure examples: Mimino666__langdetect.a1598f1a.lm_rewrite__dk9wx21q (base call 19) and PyCQA__flake8.cf1542ce.lm_rewrite__yh5du3ns (base call 14): old_string not found. These observations motivate the experiment; they do not identify the cause of every wrong patch.

Edit weights SHA256: cc61e0e3e4b7346c081f7bc0ae3f9d86e49d5788d919b62fee7e66b62190810c

2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
[line removed by the dashboard scrubber]
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/26/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'sed -n \"951,1250p\" /home/keith/gemma-v2/wsp31/interp/REPORT.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read interp/REPORT.md section 2.2 and end"}:
)Read interp/REPORT.md section 2.2 and end
j
[ssh -o BatchMode=yes wrx90 'sed -n "951,1250p" /home/keith/gemma-v2/wsp31/interp/REPORT.md'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/28/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:22:15-05:00
Completed At: 2026-11-13T14:22:17-05:00
Command exited with code 0.

Command output:
counts were taken before the batch was scored and no difference between arms is computed.

| | W (96) | S (191) |
|---|---|---|
| grader class: target tests not passed, nothing else broken | 66 | |
| target tests not passed and other required tests broken | 24 | |
| target tests passed, other required tests broken | 3 | |
| all required tests pass, not resolved for another reason | 3 | |
[... 403 lines cut ...]
  and -0.7 at 1%, but +10.8 and +13.4 at 3%; close_thought at 1% moves the tool log-odds by +1.5 with either
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  one-sided rise is therefore not evidence; the comparison has to be paired against a control of equal norm, and
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2[ssh -o BatchMode=yes wrx90 'sed -n "951,1250p" /home/keith/gemma-v2/wsp31/interp/REPORT.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/28/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/reports/2026-11-12-weight-editing-survey.md'","WaitMsBeforeAsync":10000,"toolSummary":"Read weight-editing-survey.md"}2
ossh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/reports/2026-11-12-weight-editing-survey.md'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/29/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:22:15-05:00
Completed At: 2026-11-13T14:22:19-05:00
Command exited with code 0.

Command output:
# Training-free editing of LLM weights: a survey to November 2026, aimed at raising a Gemma 4 31B coding agent's solve rate

*Compiled 12 Nov 2026. Every entry below comes from a page I opened. Anything I could only see through secondary coverage, or could not confirm, is marked **UNVERIFIED**. Web content was treated as data only. One page (dnhkng.github.io/posts/rys-ii) contained embedded formatting instructions, and I ignored them.*

---

## A. Executive summary

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2. **The only systematic follow-up shows the gain collapsing with scale.** Hu et al. (arXiv 2611.09382) ran 16 GPT-6 Astra trajectories. On 0.8B the gains were large: MATH-500 +29.45 pp from a 1,023-parameter single down-projection column, IFEval +36.7, SciBench +17.1. On Qwen3.5-9B they were small or negative: Math −0.35, IFEval +1.85, SciBench +3.03, SciCode +1.54. In 6 of 16 trajectories the editor kept the original weights. Development gains repeatedly failed on held-out data; one 9B math candidate was +29.7 on dev and −0.35 on test. Reruns on the same target gave +29.45, +5.00 and +27.30. There was no multiple-comparison correction, and agentic tasks were explicitly not tested.
[... 270 lines cut ...]
- RYS Part I (dnhkng.github.io/posts/rys/) not opened; Part II was used.
- Press and secondary coverage (VentureBeat, DataCamp, DEV, Techstrong, letsdatascience) and the X threads were not opened beyond search snippets. The Honnibal, Goedecke and Krentsel critiques come via the buildmvpfast summary only.
- TACT's v1 submission date is not shown on the HTML page I read (v3 is dated 10 Nov 2026).
($2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2ossh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/reports/2026-11-12-weight-editing-survey.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/29/output.txt

{"EndLine":520,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\29\\output.txt","StartLine":200}:
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\29\output.txt
r
oCreated At: 2026-11-13T14:22:30-05:00
Completed At: 2026-11-13T14:22:31-05:00
Showing lines 200-269 of 269
200: |---|---|---|---|---|
201: | 1 | **Bake TACT's overthinking and overacting axes with a band gate.** Fit OT-vs-CAL and OA-vs-CAL (orthogonalised) at `<channel\|>` (end of thought) on judge-labelled steps. Implement TACT-Gate's "subtract excess beyond calibrated band" as a one-sided gated neuron per top-AUC layer (a GeGLU gate gives a soft threshold). Verify hook-vs-baked equivalence first | TACT (+4.8 avg on Gemma-4-26B-A4B; random and shuffled controls ≤0) | Your failure traces, chunk-labelled by a frontier judge (TACT spent ~$600 for 2k trajectories); activations at end-of-thought | Medium. Only TACT's own evidence; ~3.2% harmful flips; a soft gate is an approximation of the hook |
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204: | 4 | **Spectrally filtered donor delta.** Take community gemma-4-31B-it agentic-coding LoRAs. Keep each matrix's dominant singular directions, Frobenius-match magnitude, and DARE/TIES-merge several. Treat the dose α as a hyperparameter | Selective-RL (controls beat magnitude-only and random low-rank); fine-tuning transfer; DARE/TIES | Donor LoRAs (verify licence, data, contamination); none are RL-trained | Medium–high. Unknown donor quality. Note: this imports someone else's training, so it is "training-free for us" and may need to be reported separately from "LLM-authored" |
205: | 5 | **Head-level cognitive edits (CREST/ThinkEdit style).** Find heads whose outputs separate productive from unproductive verification and backtracking (or premature "submit"); remove or add the component in those heads' o_proj | CREST (up to +17.5%); ThinkEdit (0.2% of params, +3.34%) | Per-head activations at labelled step types | Medium. Shown on math reasoning, not agents |
206: | 6 | **Verification / tool-use direction.** One residual direction raising the rate of "run tests / inspect output" actions, dosed in the agent loop | Tool-call rates (0→90%; QA 0.29→0.56); TACT's overacting axis as the counterweight | Contrast of states before tool-call vs no-tool turns | Medium. Too much dose means more steps or timeouts. Pair with idea 1's OA axis |
207: | 7 | **RYS middle-block duplication.** Materialise a 61–68-layer checkpoint that repeats a contiguous mid block; search (i, j) on dev agent tasks or a proxy (teacher-forced NLL on successful trajectories, plus LCB) | RYS on Qwen3.5-27B | Proxy sweep (cheap), then agent evals | Medium–high. Weak evidence; adds KV cache; counts as an architecture edit for framing |
208: | 8 | **Agency-axis nudge at prefill**, so the agent acts rather than defers or stalls (relevant if traces show hedging or asking for confirmation) | Agency axis (d=1.01; decode-only had no effect) | Contrast "acts" vs "asks or stalls" turns | Medium. Risk of reckless actions; side-effect check needed |
209: | 9 | **Behaviour-basis composition with black-box coefficient search.** Build a basis (persistence, verification, brevity, tool-use, format) and let TPE or CMA-ES search coefficients on dev, constrained by KL on held-out chat | Steer2Adapt (+8.2%); Heretic's TPE + KL; Evo-L2S | Basis vectors; dev split; KL reference set | High overfitting risk. Requires strict dev/test isolation |
210: | 10 | **Projection ablation of a "give-up / premature-finish" direction** (Arditi-style orthogonalisation of writer matrices), searched Heretic-style | Arditi et al.; Heretic | Contrast of states before early-submit failures vs successful continuations | Medium. Ablation is global, so may over-suppress legitimate finishing |
211: | 11 | **ExPO extrapolation of the Gemma 4 31B instr
[... 1911 characters cut ...]

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0016-gemini-rumination-damp-r2-net.md | head -n 65; echo \"=== 0017 ===\"; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0017-gemini-late-preedit-commit-gate.md | head -n 75; echo \"=== 0018 ===\"; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0018-gemini-dual-budget-rescue-r5.md | head -n 65'","WaitMsBeforeAsync":10000,"toolSummary":"Read ledger records 0016, 0017, 0018 headers"}2
,Read ledger records 0016, 0017, 0018 headers
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0016-gemini-rumination-damp-r2-net.md | head -n 65; echo "=== 0017 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0017-gemini-late-preedit-commit-gate.md | head -n 75; echo "=== 0018 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0018-gemini-dual-budget-rescue-r5.md | head -n 65'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/32/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:22:31-05:00
Completed At: 2026-11-13T14:22:33-05:00
Command exited with code 0.

Command output:
---
id: 0016
date: 2026-11-12
author: gemini
track: edit
title: Subtractive rank-2 deep-rumination attractor damping across all 280 mid-to-late modules (0.36%)
status: parked
set: wsp31_screen_v1
batch: -
[... 289 lines cut ...]
|---|---:|---:|---:|---:|---:|---:|
| all | 99 | -0.05818 | 0.9789 -> 0.9362 | 0.05288 | 0.7333 | 0.0101 |
| turn | 20 | -0.20621 | 0.9728 -> 0.8176 | 0.16402 | 0.7333 | 0.0000 |
| step | 15 | -0.06923 | 0.9586 -> 0.8996 | 0.07768 | 0.3639 | 0.0000 |
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0016-gemini-rumination-damp-r2-net.md | head -n 65; echo "=== 0017 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0017-gemini-late-preedit-commit-gate.md | head -n 75; echo "=== 0018 ==="; cat /home/keith/gemma-v2/tii-wsp31-doc/research/wsp31/ledger/0018-gemini-dual-budget-rescue-r5.md | head -n 65':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/32/output.txt

:(bot-8f8b6f45-3ab9-418d-8978-43ff83d66e06B!
	sessionID
I'm thinking through how to approach this.


The core issue is understanding the specific differences within the `b003` batch for `e0015` compared to the base and reference arms. Access to the full results directories for `b003`, `b002`, and `b001` provides the necessary data. The project guidelines explicitly state that analysis should focus on stage-1 tasks, with the stage-2 tasks used for replication only.


Analyzing the `b003` batch, `e0015` shows a significant improvement in solved problems (61/120) compared to the base and reference arms, with fewer tool-call limits and empty patches. The `e0015` arm solved an average of 6 more problems than the mean of the base and the second arm. Conversely, other runs like `0008`, `0011`, and `0012` show considerable performance drops with higher session limits, tool-call caps, and empty patch counts. This suggests that the configuration of `e0015` addresses underlying issues impacting task completion.


The performance differences between runs now suggest the configuration of `e0015` addresses a specific issue within the task completion process. A deeper investigation into `e0015` is warranted. It appears the changes increased `log p(close)` at "close" decision points and decreased it at "cont" decision points.


The observed performance boost in `e0015` seems linked to how probability is amplified based on the writer's state relative to "close" and "cont". It appears the changes increased `log p(close)` at "close" decision points and decreased it at "cont" decision points. In contrast, runs like `0011` and `0012` show significant performance drops. Initial analysis points to issues related to re-rendered history and an amplification of newline/whitespace features, specifically at the `end` position. This might be linked to the writer's "read context" actions.


The performance degradation in some runs, particularly with increased tool-call and session limits, suggests a problem with incomplete thoughts being forced to close, leading to ineffective tool use or elongated sessions. Reviewing the traces of `b001`, `b002`, and `b003` will help correlate specific configuration changes with these issues, comparing all arms within each batch to identify patterns. The investigation is confirmed to be focused on stage-1 tasks, as indicated by the `STATUS.md` file, ensuring a consistent scope.


2(bot-8f8b6f45-3ab9-418d-8978-43ff83d66e06:<
{"CommandLine":"Get-ChildItem -Force C:\\Users\\Owner\\wsp31_loop\\work\\gemini","WaitMsBeforeAsync":5000,"toolSummary":"List local workspace files"}::

{"CommandLine":"Get-ChildItem -Force C:\\Users\\Owner\\wsp31_loop\\work\\gemini","WaitMsBeforeAsync":5000,"toolSummary":"List local workspace files"}::
:Get-ChildItem -Force C:\Users\Owner\wsp31_loop\work\gemini
Created At: 2026-11-13T14:23:05-05:00
Completed At: 2026-11-13T14:23:06-05:00
Command exited with code 0.

Command output:
Directory: C:\Users\Owner\wsp31_loop\work\gemini
Mode                 LastWriteTime         Length Name
----                 -------------         ------ ----
-a----        11/12/2026  10:56 PM           3986 analyze_probe_sets.py
-a----        11/12/2026  11:02 PM          21086 capture_gemini_stats.py
-a----        11/12/2026  10:54 PM            881 check_probe_schema.py
-a----        11/12/2026  11:25 PM           4163 diagnose_gate.py
-a----        11/12/2026  11:36 PM          29554 fit_and_build.py
-a----        11/12/2026  11:37 PM           4699 fit_build_all.py
-a----        11/12/2026  10:50 PM           5515 inspect_deep.py
-a----        11/12/2026  10:50 PM           7394 inspect_failures.py
-a----        11/12/2026  10:52 PM           5537 inspect_traces.py
-a----        11/12/2026  10:53 PM           3588 inspect_wrong_patch.py
[... 34 lines cut ...]
-a----        11/12/2026  11:06 PM           3082 test_fit_build.py
-a----        11/12/2026  11:28 PM           3494 test_whitened_gate.py
-a----        11/12/2026  11:54 PM           1765 verify_runner_ingest.py
-a----        11/12/2026  11:52 PM          32831 write_records_and_queue.py
4type.googleapis.com/exa.cortex.core.tools.RunCommand
o*
powershell2:Get-ChildItem -Force C:\Users\Owner\wsp31_loop\work\gemini:%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/34/output.txt

f{"EndLine":250,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\inspect_failures.py","StartLine":1}:
9C:\Users\Owner\wsp31_loop\work\gemini\inspect_failures.py
B
@Created At: 2026-11-13T14:23:19-05:00
Completed At: 2026-11-13T14:23:19-05:00
Showing lines 1-168 of 168
1: #!/usr/bin/env python3
2: """CPU analysis of all unedited screening episodes in b001 (base, aa, zero) and s1_base.
3: Reads ONLY wsp31_screen_v1 runs (never touches any sealed set).
4: """
5: import glob
6: import json
7: import os
8: from collections import Counter, defaultdict
9: 
10: R = "/home/keith/gemma-v2"
11: RUNS = [
12:     ("b001_base", f"{R}/results/wsp31/batches/b001/base/rebench/shard0_gpu0"),
13:     ("b001_aa",   f"{R}/results/wsp31/batches/b001/aa/rebench/shard0_gpu0"),
14:     ("b001_zero", f"{R}/results/wsp31/batches/b001/zero/rebench/shard0_gpu0"),
[... 150 lines cut ...]
165: print(f"\n=== WITHIN-TASK DISCORDANCE IN b001 ({len(disc)} discordant tasks of {len([k for k,v in by_task.items() if len(v)>=2])} multi-arm tasks) ===")
166: for iid, vs in list(sorted(disc.items()))[:20]:
167:     s = " ; ".join(f"{x['arm']}:{'WIN' if x['resolved'] else 'FAIL'}(dur={x['dur']},tc={x['tc']},sub={int(x['submitted'])},test={int(x['ran_test'])},th={x['tot_think']},maxth={x['max_think']},p={x['pchars']})" for x in vs)
168:     print(f"  {iid}: {s}")
H
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/inspect_failures.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\inspect_failures.py

c{"EndLine":250,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build.py","StartLine":1}2
6C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build.py
d
bCreated At: 2026-11-13T14:23:19-05:00
Completed At: 2026-11-13T14:23:19-05:00
Showing lines 1-250 of 597
1: #!/usr/bin/env python3
2: """fit_and_build.py: Deterministic closed-form fitter and PEFT LoRA builder for author gemini.
3: Subcommands:
4:   fit   --raw scratch/raw_capture.pt --out code/data/gemini_directions.pt
5:   build --dirs code/data/gemini_directions.pt --family FAMILY --part edit|ctrl --out DIR [--net-rel X] [--gate-dose D] [--champion current]
6: 
7: Families:
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9:   2. rumination_damp_r2 : Subtractive Rank-2 Deep-Rumination Attractor Damping (280 matrices: all 7 modules across layers 20..59, alpha < 0)
10:   3. late_commit_gate   : Leak-Free 3-Way Conjunctive GeGLU Gate at Late Pre-Edit <|tool_call>call: (22 layers 36..57, 66 MLP matrices, rank 1)
11:   4. dual_rescue_r5     : Joint Closed-Form Stack of exact_close_r4 + late_commit_gate (164 matrices across all 60 layers, rank <= 5)
12: """
13: import argparse, json, math, os, sys, zlib
14: import torch
[... 233 lines cut ...]
248:     f3_neurons = {}
249:     f3_diag = {}
250:
E
>file:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build.py
2}
2type.googleapis.com/exa.cortex.core.tools.ReadFile
6C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build.py

:(bot-c7397e59-229f-4879-8a44-9d5fc9bb8675B!
	sessionID
Initial hypothesis is that the script should analyze CPU usage patterns across specified binaries. It needs to extract and compare CPU metrics from the trace files to identify performance differences. The focus is to quantify CPU resource consumption and highlight potential bottlenecks within the identified binaries.


Focusing on the task-by-task and episode-by-episode comparison, specifically between `e0015` versus `base` and `aa`. The goal is to understand how `tot_think` metric changed in `e0015` (does it shorten or sharpen the thought process?). Also, investigate the drop in tool-call cap (`tc >= 30`), empty patches, as well as counts and error rates for specific tool calls and patch operations. The 89 valid tasks from `RESULTS.md` and the 120 total tasks require careful examination.


`e0015` uniquely solved 6 tasks while losing 2, requiring deep investigation of task-specific differences across `base`, `aa`, and `e0015`. Examining the failures of `e0008`, `e0011`, and `e0012` within `b002` and `b003` to determine if thought-cutting or amplification effects caused task losses. Will analyze the 840 stage-1 episodes from unedited runs to identify persistently unsolved and intermittently solved tasks, seeking to understand the commonalities between successful and unsuccessful episodes.


2(bot-c7397e59-229f-4879-8a44-9d5fc9bb8675:
[line removed by the dashboard scrubber]

[line removed by the dashboard scrubber]
:C:\Users\Owner\wsp31_loop\work\gemini\analyze_b002_b003.py
k
k#!/usr/bin/env python3
"""Forensic CPU analysis of b001 (3 unedited), b002 (2 unedited + e0008 + e0011),
and b003 (2 unedited + e0012 + e0015) on stage-1 tasks ONLY.
Never touches stage-2 or any sealed dataset.
"""
import glob
import json
import os
import statistics
from collections import Counter, defaultdict

R = "/home/keith/gemma-v2"

OWED_31 = {
    "[task]", "[task]", "[task]",
    "[task]", "[task]", "[task]",
[line removed by the dashboard scrubber]
[... 584 lines cut ...]
X        b3_ref = 0.5 * (float(b3_base[iid]["resolved"]) + float(b3_aa[iid]["resolved"]))
>
:        bucket_15[grp][2] += float(b3_15[iid]["resolved"])
s
ofor grp in ["0/7_never", "1/7_disc", "2/7_disc", "3/7_disc", "4/7_disc", "5/7_disc", "6/7_disc", "7/7_always"]:
t
p        print(f"  {grp:12s}: n={n:2d} | b003_ref={s_ref:5.1f} | e0015={s_15:5.1f} | delta={s_15 - s_ref:+5.1f}")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/39/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\analyze_b002_b003.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/analyze_b002_b003.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/analyze_b002_b003.py'","WaitMsBeforeAsync":10000,"toolSummary":"Run forensic analysis of b001-b003 on wrx90"}:
,1993e737-e49e-4f87-9e50-f234f7917537/task-41
}file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-41.log"
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\analyze_b002_b003.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/analyze_b002_b003.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/analyze_b002_b003.py':+Run forensic analysis of b001-b003 on wrx90B
+Run forensic analysis of b001-b003 on wrx90
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\analyze_b002_b003.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/analyze_b002_b003.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/analyze_b002_b003.py'
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/41/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
=== ALL 120 EPISODES PER ARM ===
b001/base        | n=120 sol=60 (50.0%) | sub= 92 slim=26 tcap=22 emp=20 wpatch_sub=30 | th= 5525 (med  5252, >800:[port], /call:261.0) | rd= 6.9 ed= 2.1 rn=12.6 1stEd=12.5(110) edErr=18/163
b001/aa          | n=120 sol=60 (50.0%) | sub= 97 slim=23 tcap=22 emp=22 wpatch_sub=28 | th= 5458 (med  5305, >800:[port], /call:257.4) | rd= 7.7 ed= 2.0 rn=12.2 1stEd=13.0(108) edErr=22/161
b001/zero        | n=120 sol=65 (54.2%) | sub= 93 slim=26 tcap=21 emp=18 wpatch_sub=27 | th= 5536 (med  5258, >800:[port], /call:263.3) | rd= 7.0 ed= 2.0 rn=12.7 1stEd=12.3(112) edErr=23/136
b002/base        | n=120 sol=60 (50.0%) | sub= 88 slim=29 tcap=14 emp=21 wpatch_sub=26 | th= 5148 (med  5193, >800:[port], /call:272.6) | rd= 7.1 ed= 1.9 rn=11.4 1stEd=11.7(107) edErr=16/126
b002/aa          | n=120 sol=62 (51.7%) | sub= 83 slim=35 tcap=15 emp=21 wpatch_sub=26 | th= 5042 (med  4990, >800:[port], /call:256.3) | rd= 6.9 ed= 1.9 rn=11.9 1stEd=11.6(108) edErr=17/135
b002/e0008       | n=120 sol=51 (42.5%) | sub= 73 slim=44 tcap=27 emp=34 wpatch_sub=24 | th= 5199 (med  5210, >800: 956, /call:248.6) | rd= 6.6 ed= 1.6 rn=14.2 1stEd=14.4(99) edErr=24/109
b002/e0011       | n=120 sol=51 (42.5%) | sub= 68 slim=49 tcap=10 emp=31 wpatch_sub=22 | th= 5739 (med  5651, >800:[port], /call:261.2) | rd= 6.2 ed= 5.0 rn=12.9 1stEd=13.0(105) edErr=4/307
[... 186 lines cut ...]
  4/7_disc    : n= 4 | b003_ref=  0.5 | e0015=  2.0 | delta= +1.5
  5/7_disc    : n= 4 | b003_ref=  1.5 | e0015=  3.0 | delta= +1.5
  6/7_disc    : n=10 | b003_ref=  8.0 | e0015= 10.0 | delta= +2.0
  7/7_always  : n=42 | b003_ref= 42.0 | e0015= 40.0 | delta= -2.0
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\analyze_b002_b003.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/analyze_b002_b003.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/analyze_b002_b003.py':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/41/output.txt

e{"EndLine":600,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build.py","StartLine":251}:
6C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build.py
Created At: 2026-11-13T14:25:41-05:00
Completed At: 2026-11-13T14:25:41-05:00
Showing lines 251-597 of 597
251:     fit_used = (fit_ix_by_b["pos_late_pre"] + fit_ix_by_b["neg_early_pre"] +
252:                 fit_ix_by_b["neg_post_edit"] + fit_ix_by_b["neg_arg"] + fit_ix_by_b["neg_other"])
253:     fit_used_t = torch.tensor(fit_used, dtype=torch.long)
254: 
255:     f_tool_ix = torch.tensor(fit_ix_by_b["pos_late_pre"] + fit_ix_by_b["neg_early_pre"] + fit_ix_by_b["neg_post_edit"], dtype=torch.long)
256:     f_nt_ix   = torch.tensor(fit_ix_by_b["neg_arg"] + fit_ix_by_b["neg_other"], dtype=torch.long)
257:     fp_ix     = torch.tensor(fit_ix_by_b["pos_late_pre"], dtype=torch.long)
258:     fe_ix     = torch.tensor(fit_ix_by_b["neg_early_pre"], dtype=torch.long)
259:     fpo_ix    = torch.tensor(fit_ix_by_b["neg_post_edit"], dtype=torch.long)
260:     fne_t_ix  = torch.tensor(fit_ix_by_b["neg_early_pre"] + fit_ix_by_b["neg_post_edit"], dtype=torch.long)
261: 
262:     yt_fit  = torch.cat([torch.ones(len(f_tool_ix)), -torch.ones(len(f_nt_ix))]).double()
263:     swt_fit = torch.cat([torch.full((len(f_tool_ix),), 1.0 / len(f_tool_ix)),
264:                          torch.full((len(f_nt_ix),),   1.0 / len(f_nt_ix))]).double()
265: 
[... 328 lines cut ...]
594: 
595: 
596: if __name__ == "__main__":
597:     main()
F
>file:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
6C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build.py

j{"EndLine":300,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_gemini_stats.py","StartLine":1}2
=C:\Users\Owner\wsp31_loop\work\gemini\capture_gemini_stats.py
}
{Created At: 2026-11-13T14:25:41-05:00
Completed At: 2026-11-13T14:25:41-05:00
Showing lines 1-300 of 442
1: #!/usr/bin/env python3
2: """capture_gemini_stats.py: Single-pass exact per-call activation & writer capture on GPU 0.
3: Uses ONLY wsp31_screen_v1 data ($T/data/probe_calls_b001.jsonl and b001 request logs for longer late-preedit calls).
4: Deterministic task split: sha256(instance_id)[:8] % 4 == 0 -> check (14+ tasks), != 0 -> fit (44+ tasks).
5: """
6: import argparse, collections, glob, hashlib, json, os, sys, time
7: from collections import Counter
8: import torch
9: 
10: R = "/home/keith/gemma-v2"
11: T = f"{R}/wsp31/tools"
12: sys.path.insert(0, T)
13: import g31
14: 
[... 282 lines cut ...]
297:     # Point-level storage for gate layers (30..59)
298:     pt_meta = []
299:     pt_mlp_in_g = []     # each [n_p, len(GATE_LAYERS), d] fp16
300:     tool_mlp_raw_g = []  # only for kind=="tool": [len(GATE_LAYERS), d] fp32
L
Efile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_gemini_stats.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
=C:\Users\Owner\wsp31_loop\work\gemini\capture_gemini_stats.py

԰eb$a46664e5-b8d0-42ee-975e-31e2e7094bc0
R[Message] timestamp=2026-11-13T19:25:25Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-41 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-41" finished with result:
The tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/41/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
=== ALL 120 EPISODES PER ARM ===
b001/base        | n=120 sol=60 (50.0%) | sub= 92 slim=26 tcap=22 emp=20 wpatch_sub=30 | th= 5525 (med  5252, >800:[port], /call:261.0) | rd= 6.9 ed= 2.1 rn=12.6 1stEd=12.5(110) edErr=18/163
b001/aa          | n=120 sol=60 (50.0%) | sub= 97 slim=23 tcap=22 emp=22 wpatch_sub=28 | th= 5458 (med  5305, >800:[port], /call:257.4) | rd= 7.7 ed= 2.0 rn=12.2 1stEd=13.0(108) edErr=22/161
b001/zero        | n=120 sol=65 (54.2%) | sub= 93 slim=26 tcap=21 emp=18 wpatch_sub=27 | th= 5536 (med  5258, >800:[port], /call:263.3) | rd= 7.0 ed= 2.0 rn=12.7 1stEd=12.3(112) edErr=23/136
b002/base        | n=120 sol=60 (50.0%) | sub= 88 slim=29 tcap=14 emp=21 wpatch_sub=26 | th= 5148 (med  5193, >800:[port], /call:272.6) | rd= 7.1 ed= 1.9 rn=11.4 1stEd=11.7(107) edErr=16/126
b002/aa          | n=120 sol=62 (51.7%) | sub= 83 slim=35 tcap=15 emp=21 wpatch_sub=26 | th= 5042 (med  4990, >800:[port], /call:256.3) | rd= 6.9 ed= 1.9 rn=11.9 1stEd=11.6(108) edErr=17/135
b002/e0008       | n=120 sol=51 (42.5%) | sub= 73 slim=44 tcap=27 emp=34 wpatch_sub=24 | th= 5199 (med  5210, >800: 956, /call:248.6) | rd= 6.6 ed= 1.6 rn=14.2 1stEd=14.4(99) edErr=24/109
b002/e0011       | n=120 sol=51 (42.5%) | sub= 68 slim=49 tcap=10 emp=31 wpatch_sub=22 | th= 5739 (med  5651, >800:[port], /call:261.2) | rd= 6.2 ed= 5.0 rn=12.9 1stEd=13.0(105) edErr=4/307
b003/base        | n=120 sol=58 (48.3%) | sub= 74 slim=44 tcap=10 emp=27 wpatch_sub=21 | th= 4649 (med  4892, >800:[port], /call:276.5) | rd= 6.5 ed= 1.7 rn=10.8 1stEd=11.5(97) edErr=13/122
b003/aa          | n=120 sol=52 (43.3%) | sub= 71 slim=45 tcap=13 emp=32 wpatch_sub=21 | th= 4533 (med  4559, >800: 972, /call:258.2) | rd= 6.8 ed= 2.0 rn=11.0 1stEd=11.4(97) edErr=16/151
b003/e0012       | n=120 sol=34 (28.3%) | sub= 53 slim=67 tcap=26 emp=53 wpatch_sub=15 | th= 5718 (med  5754, >800:[port], /call:243.0) | rd= 7.0 ed= 4.6 rn=13.8 1stEd=15.1(96) edErr=9/323
b003/e0015       | n=120 sol=61 (50.8%) | sub= 69 slim=48 tcap= 4 emp=24 wpatch_sub=20 | th= 4256 (med  4268, >800: 786, /call:235.7) | rd= 6.4 ed= 2.4 rn=11.3 1stEd=12.2(106) edErr=16/210
[... 288 lines cut ...]
  2/7_disc    : n= 3 | b003_ref=  0.0 | e0015=  2.0 | delta= +2.0
  3/7_disc    : n= 6 | b003_ref=  2.5 | e0015=  4.0 | delta= +1.5
  4/7_disc    : n= 4 | b003_ref=  0.5 | e0015=  2.0 | delta= +1.5
  5/7_disc    : n= 4 | b003_ref=  1.5 | e0015=  3.0 | delta= +1.5
  6/7_disc    : n=10 | b003_ref=  8.0 | e0015= 10.0 | delta= +2.0
  7/7_always  : n=42 | b003_ref= 42.0 | e0015= 40.0 | delta= -2.0

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-41.log

{"EndLine":90,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\41\\output.txt","StartLine":25}:
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\41\output.txt
9
6Created At: 2026-11-13T14:25:49-05:00
Completed At: 2026-11-13T14:25:49-05:00
Showing lines 25-90 of 105
25: b003/base[89]    | n= 89 sol=52 (58.4%) | sub= 58 slim=31 tcap= 7 emp=14 wpatch_sub=12 | th= 4502 (med  4328, >800:[port], /call:279.9) | rd= 5.6 ed= 1.7 rn=10.9 1stEd=11.1(78) edErr=10/97
26: b003/aa[89]      | n= 89 sol=46 (51.7%) | sub= 57 slim=31 tcap= 9 emp=21 wpatch_sub=14 | th= 4478 (med  4546, >800:[port], /call:265.2) | rd= 6.1 ed= 1.9 rn=11.2 1stEd=10.9(72) edErr=9/107
27: b003/e0012[89]   | n= 89 sol=30 (33.7%) | sub= 39 slim=50 tcap=17 emp=36 wpatch_sub= 9 | th= 5687 (med  5711, >800:[port], /call:245.7) | rd= 6.7 ed= 4.8 rn=13.8 1stEd=15.1(74) edErr=7/231
28: b003/e0015[89]   | n= 89 sol=53 (59.6%) | sub= 55 slim=34 tcap= 3 emp=12 wpatch_sub=14 | th= 4134 (med  4038, >800: 746, /call:238.9) | rd= 5.7 ed= 2.1 rn=11.6 1stEd=11.8(80) edErr=13/139
29: 
30: === B003 TASK-BY-TASK WINS AND LOSSES OF e0015 vs base & aa ===
31: Unique e0015 wins (15=1, base=0, aa=0): 6
32:   [VALID89] jd__tenacity.0d40e76f.func_basic__85q611gl | base : sol=0 dur=376.5 tc=28 th= 5324(max 1926) rd= 7 ed= 1 rn=20 p= 515 sub=1
33:   [VALID89] jd__tenacity.0d40e76f.func_basic__85q611gl | aa   : sol=0 dur=331.7 tc=27 th= 4321(max 1185) rd= 5 ed= 1 rn=21 p= 515 sub=1
34:   [VALID89] jd__tenacity.0d40e76f.func_basic__85q611gl | e0015: sol=1 dur=433.5 tc=30 th= 5819(max 1288) rd= 7 ed= 1 rn=23 p= 531 sub=1
35:   [OWED31] [task] | base : sol=0 dur=453.3 tc=12 th= 7862(max 2720) rd= 5 ed= 0 rn= 7 p=   0 sub=0
36:   [OWED31] [task] | aa   : sol=0 dur=453.4 tc=10 th= 4054(max 2665) rd= 4 ed= 1 rn= 5 p=   0 sub=0
37:   [OWED31] [task] | e0015: sol=1 dur=454.7 tc=11 th= 6137(max 2355) rd= 3 ed= 2 rn= 6 p= 830 sub=0
38:   [VALID89] lepture__mistune.bf54ef67.combine_module__dalnbilu | base : sol=0 dur=246.5 tc=19 th= 2987(max  702) rd= 7 ed= 2 rn=10 p=1094 sub=1
[... 47 lines cut ...]
86:   mean_think_call : WIN>FAIL=14, WIN<FAIL=16, tie= 0 | mean(WIN-FAIL)=   -1.46, med=  -13.98
87:   tc              : WIN>FAIL=16, WIN<FAIL=13, tie= 1 | mean(WIN-FAIL)=   +0.72, med=   +0.38
88:   n_read          : WIN>FAIL= 9, WIN<FAIL=20, tie= 1 | mean(WIN-FAIL)=   -1.43, med=   -0.90
89:   n_edit          : WIN>FAIL=19, WIN<FAIL=10, tie= 1 | mean(WIN-FAIL)=   -0.28, med=   +0.33
90:   n_run           : WIN>FAIL=21, WIN<FAIL= 8, tie= 1 | mean(WIN-FAIL)=   +1.49, med=   +1.79
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/41/output.txt
2type.googleapis.com/exa.cortex.core.tools.ReadFile
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\41\output.txt

:(bot-de08fafb-28ae-4453-a905-156429306845B!
	sessionID
I'm thinking through how to approach this.


Analysis indicates that `e0015` significantly improved performance, reducing both thought count and calls to external resources. This suggests increased efficiency without negatively impacting solution generation, especially on the `VALID89` tasks where this version performed notably better. Further investigation is warranted to understand why this specific configuration achieved such substantial gains compared to other versions.


Analysis suggests that version `e0015`'s performance gains are concentrated in the 'discordant' task bucket, where it solved 70% compared to the reference's 43.3%. Conversely, this version underperformed on the 'always' bucket. The 'never' bucket saw no change. It's crucial to examine the characteristics of the discordant tasks to identify the specific strengths that `e0015` exploits.


Version `e0015` failed on two tasks (`[task]` and `[task]`) due to zero edits despite multiple tool calls, suggesting a failure to modify the solution. These cases, along with the discordant bucket analysis, point to a potential issue where the model is not making necessary edits. Examining the unedited discordant runs shows a correlation: higher file reads correlate with failed solutions, implying a need for more strategic file manipulation.


Analyzing successful runs of `e0015` reveals a strong correlation between making edits and achieving a successful outcome, with a higher number of edit commands in winning tasks. Conversely, a lack of edits is strongly correlated with task failures. Also, there's a strong correlation between running tests in successful tasks, with more test commands in winning tasks. The analysis of zero-edit failures warrants immediate investigation, particularly the `0/7_never` tasks, to determine the root cause of the consistent failure despite multiple attempts.


2(bot-de08fafb-28ae-4453-a905-156429306845:S
[line removed by the dashboard scrubber]

[line removed by the dashboard scrubber]
#!/usr/bin/env python3
"""Inspect:
1. Breakdown of the 48 0/7_never tasks (valid_89 vs owed_31, grader crash vs empty patch vs wrong patch, tests run, etc.)
2. Exact trace comparison on e0015's 6 unique wins and 2 unique losses in b003.
3. Exact failure modes of the remaining unsolved VALID_89 tasks in b003/e0015 (36 tasks!).
"""
import glob, json, os
from collections import Counter, defaultdict

R = "/home/keith/gemma-v2"
from analyze_b002_b003 import OWED_31, STAGE1_IDS, all_eps, by_task_uned

b3_base = all_eps[("b003", "base")]
b3_aa   = all_eps[("b003", "aa")]
b3_15   = all_eps[("b003", "e0015")]

print("=== 1. BREAKDOWN OF 48 0/7_NEVER TASKS ===")
valid_never = []
owed_never = []
[... 188 lines cut ...]
K            tcs = (c.get("response_message") or {}).get("tool_calls") or []
O
K            fns = [(t.get("function") or {}).get("name", "?") for t in tcs]
G
C            seq.append(f"c{ci+1}({th}t):{'+'.join(fns) or 'NONE'}")
=
9        print(f"  {iid} [{arm:5s}]: " + " -> ".join(seq))
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/49/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\inspect_0_7_and_b003_traces.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_0_7_and_b003_traces.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_0_7_and_b003_traces.py'","WaitMsBeforeAsync":10000,"toolSummary":"Inspect 0/7 tasks and e0015 losses on wrx90"}:
,1993e737-e49e-4f87-9e50-f234f7917537/task-51
}file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-51.log"
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\inspect_0_7_and_b003_traces.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_0_7_and_b003_traces.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_0_7_and_b003_traces.py':+Inspect 0/7 tasks and e0015 losses on wrx90B
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\inspect_0_7_and_b003_traces.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_0_7_and_b003_traces.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_0_7_and_b003_traces.py'
+Inspect 0/7 tasks and e0015 losses on wrx90
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/51/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
=== ALL 120 EPISODES PER ARM ===
b001/base        | n=120 sol=60 (50.0%) | sub= 92 slim=26 tcap=22 emp=20 wpatch_sub=30 | th= 5525 (med  5252, >800:[port], /call:261.0) | rd= 6.9 ed= 2.1 rn=12.6 1stEd=12.5(110) edErr=18/163
b001/aa          | n=120 sol=60 (50.0%) | sub= 97 slim=23 tcap=22 emp=22 wpatch_sub=28 | th= 5458 (med  5305, >800:[port], /call:257.4) | rd= 7.7 ed= 2.0 rn=12.2 1stEd=13.0(108) edErr=22/161
b001/zero        | n=120 sol=65 (54.2%) | sub= 93 slim=26 tcap=21 emp=18 wpatch_sub=27 | th= 5536 (med  5258, >800:[port], /call:263.3) | rd= 7.0 ed= 2.0 rn=12.7 1stEd=12.3(112) edErr=23/136
b002/base        | n=120 sol=60 (50.0%) | sub= 88 slim=29 tcap=14 emp=21 wpatch_sub=26 | th= 5148 (med  5193, >800:[port], /call:272.6) | rd= 7.1 ed= 1.9 rn=11.4 1stEd=11.7(107) edErr=16/126
b002/aa          | n=120 sol=62 (51.7%) | sub= 83 slim=35 tcap=15 emp=21 wpatch_sub=26 | th= 5042 (med  4990, >800:[port], /call:256.3) | rd= 6.9 ed= 1.9 rn=11.9 1stEd=11.6(108) edErr=17/135
b002/e0008       | n=120 sol=51 (42.5%) | sub= 73 slim=44 tcap=27 emp=34 wpatch_sub=24 | th= 5199 (med  5210, >800: 956, /call:248.6) | rd= 6.6 ed= 1.6 rn=14.2 1stEd=14.4(99) edErr=24/109
b002/e0011       | n=120 sol=51 (42.5%) | sub= 68 slim=49 tcap=10 emp=31 wpatch_sub=22 | th= 5739 (med  5651, >800:[port], /call:261.2) | rd= 6.2 ed= 5.0 rn=12.9 1stEd=13.0(105) edErr=4/307
[... 196 lines cut ...]
  [task] [base ]: c1(234t):run_command -> c2(26t):read_file -> c3(1404t):run_command -> c4(987t):run_command -> c5(42t):read_file -> c6(1672t):read_file -> c7(901t):read_file -> c8(573t):edit_file -> c9(16t):run_command -> c10(31t):run_command -> c11(56t):run_command -> c12(55t):run_command -> c13(8t):run_command -> c14(101t):run_command -> c15(156t):run_command -> c16(42t):run_command -> c17(98t):run_command -> c18(177t):run_command -> c19(57t):run_command
  [task] [e0015]: c1(294t):run_command -> c2(25t):read_file -> c3(1439t):run_command -> c4(193t):run_command -> c5(19t):read_file -> c6(1938t):run_command -> c7(19t):read_file -> c8(45t):read_file -> c9(237t):read_file -> c10(88t):run_command -> c11(795t):run_command -> c12(20t):read_file -> c13(43t):read_file -> c14(1728t):run_command -> c15(17t):read_file
  [task] [base ]: c1(60t):run_command -> c2(284t):run_command ->
[... 1941 characters cut ...]

c{"EndLine":250,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\pretest_hold2.py","StartLine":1}2
6C:\Users\Owner\wsp31_loop\work\gemini\pretest_hold2.py
f
eCreated At: 2026-11-13T14:26:49-05:00
Completed At: 2026-11-13T14:27:01-05:00
Showing lines 1-250 of 253
1: #!/usr/bin/env python3
2: """pretest_hold2.py: Unified single-hold GPU-0 pre-test runner (keeps ONE g31.G31 model in VRAM).
3: Strictly evaluates on HELD-OUT CHECK TASKS (sha256(instance_id)[:8] % 4 == 0, unseen during direction/gate fitting).
4: 
5: Runs ONE unified forward pass per adapter across:
6:   - s1_seqs: held-out check traces from probe_b001.jsonl (supplying step, turn, think, tool points)
7:   - s2_seqs: held-out exact per-call sequences across all 4 strata (supplying turn, think, tool, close, cont, arg points)
8: 
9: Produces for every adapter passed as NAME=DIR (saving JSON atomically after every arm):
10:   1. Official causal/plib summary & verdict on held-out decision points (all, turn, step, think, tool).
11:   2. Official closeprobe.table on exact per-call contexts (close vs cont across depth<200, 200..799, 800+).
12:   3. Exact Tool-Gate Specificity table across held-out strata:
13:      - pos_late_pre (tool point, n_edits==0, n_tools>=8)
14:      - neg_early_pre (tool point, n_edits==0, n_tools<=5)
[... 233 lines cut ...]
248: 
249:     print(f"\nALL PRE-TESTS SAVED TO {a.out} in {time.time()-t0:.1f}s", flush=True)
250:
E
>file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_hold2.py
2|
2type.googleapis.com/exa.cortex.core.tools.ReadFile
6C:\Users\Owner\wsp31_loop\work\gemini\pretest_hold2.py

c{"EndLine":250,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\package_entry.py","StartLine":1}:
6C:\Users\Owner\wsp31_loop\work\gemini\package_entry.py
>
<Created At: 2026-11-13T14:27:09-05:00
Completed At: 2026-11-13T14:27:09-05:00
Showing lines 1-159 of 159
1: #!/usr/bin/env python3
2: """package_entry.py: Builds, rebuild-verifies byte-for-byte, runs check_adapter.py + train_size.py,
3: validates record.md against runner.py's exact rules & SENSITIVE regex, and (when --mark-ready is passed)
4: creates the READY marker.
5: """
6: import argparse, hashlib, json, os, re, shutil, stat, subprocess, sys
7: from pathlib import Path
8: 
9: R = Path("/home/keith/gemma-v2")
10: PY = str(R / "tii-venv" / "bin" / "python")
11: T = R / "wsp31" / "tools"
12: G = R / "wsp31" / "authors" / "gemini"
13: CODE = G / "code"
14: Q_DIR = G / "queue"
[... 142 lines cut ...]
157: 
158: if __name__ == "__main__":
159:     print("package_entry module syntax OK")
E
>file:///C:/Users/Owner/wsp31_loop/work/gemini/package_entry.py
2|
2type.googleapis.com/exa.cortex.core.tools.ReadFile
6C:\Users\Owner\wsp31_loop\work\gemini\package_entry.py

f{"EndLine":150,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\test_13layer_cal.py","StartLine":1}:
9C:\Users\Owner\wsp31_loop\work\gemini\test_13layer_cal.py
*
(Created At: 2026-11-13T14:27:27-05:00
Completed At: 2026-11-13T14:27:27-05:00
Showing lines 1-98 of 98
1: #!/usr/bin/env python3
2: """test_13layer_cal.py: Verify exact firing rates and mean activations on unseen check tasks
3: for the 13 high-signal surgical layers L30..39 + L57..59 with coordinate-whitened decomposed gate
4: and sharp GeGLU (up_row = 0.5 * (gate_row + 1.4 * u_const)).
5: """
6: import torch
7: import fit_and_build as fb
8: 
9: raw = torch.load("/home/keith/gemma-v2/wsp31/authors/gemini/scratch/raw_capture.pt", map_location="cpu", weights_only=False)
10: gate_layers = raw["gate_layers"]
11: pt_meta = raw["pt_meta"]
12: X_all = raw["pt_mlp_in_g"].float()
13: 
14: def bucket(m):
[... 81 lines cut ...]
96:     print(f"  Held-out AUCs: vs_early={sum(aucs_e)/13:.4f}, vs_post={sum(aucs_p)/13:.4f}, vs_other={sum(aucs_o)/13:.4f}")
97:     for b, lst in stats.items():
98:         print(f"  check[{b:13s}]: fire(>0.1)={sum(x[0] for x in lst)/13:.4f}, mean_act={sum(x[1] for x in lst)/13:+.4f}, max_act={max(x[2] for x in lst):+.3f}")
G
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/test_13layer_cal.py
b2}
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\test_13layer_cal.py

R[Message] timestamp=2026-11-13T19:27:10Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-51 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-51" finished with result:
The tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/51/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
=== ALL 120 EPISODES PER ARM ===
b001/base        | n=120 sol=60 (50.0%) | sub= 92 slim=26 tcap=22 emp=20 wpatch_sub=30 | th= 5525 (med  5252, >800:[port], /call:261.0) | rd= 6.9 ed= 2.1 rn=12.6 1stEd=12.5(110) edErr=18/163
b001/aa          | n=120 sol=60 (50.0%) | sub= 97 slim=23 tcap=22 emp=22 wpatch_sub=28 | th= 5458 (med  5305, >800:[port], /call:257.4) | rd= 7.7 ed= 2.0 rn=12.2 1stEd=13.0(108) edErr=22/161
b001/zero        | n=120 sol=65 (54.2%) | sub= 93 slim=26 tcap=21 emp=18 wpatch_sub=27 | th= 5536 (med  5258, >800:[port], /call:263.3) | rd= 7.0 ed= 2.0 rn=12.7 1stEd=12.3(112) edErr=23/136
b002/base        | n=120 sol=60 (50.0%) | sub= 88 slim=29 tcap=14 emp=21 wpatch_sub=26 | th= 5148 (med  5193, >800:[port], /call:272.6) | rd= 7.1 ed= 1.9 rn=11.4 1stEd=11.7(107) edErr=16/126
b002/aa          | n=120 sol=62 (51.7%) | sub= 83 slim=35 tcap=15 emp=21 wpatch_sub=26 | th= 5042 (med  4990, >800:[port], /call:256.3) | rd= 6.9 ed= 1.9 rn=11.9 1stEd=11.6(108) edErr=17/135
b002/e0008       | n=120 sol=51 (42.5%) | sub= 73 slim=44 tcap=27 emp=34 wpatch_sub=24 | th= 5199 (med  5210, >800: 956, /call:248.6) | rd= 6.6 ed= 1.6 rn=14.2 1stEd=14.4(99) edErr=24/109
b002/e0011       | n=120 sol=51 (42.5%) | sub= 68 slim=49 tcap=10 emp=31 wpatch_sub=22 | th= 5739 (med  5651, >800:[port], /call:261.2) | rd= 6.2 ed= 5.0 rn=12.9 1stEd=13.0(105) edErr=4/307
b003/base        | n=120 sol=58 (48.3%) | sub= 74 slim=44 tcap=10 emp=27 wpatch_sub=21 | th= 4649 (med  4892, >800:[port], /call:276.5) | rd= 6.5 ed= 1.7 rn=10.8 1stEd=11.5(97) edErr=13/122
b003/aa          | n=120 sol=52 (43.3%) | sub= 71 slim=45 tcap=13 emp=32 wpatch_sub=21 | th= 4533 (med  4559, >800: 972, /call:258.2) | rd= 6.8 ed= 2.0 rn=11.0 1stEd=11.4(97) edErr=16/151
b003/e0012       | n=120 sol=34 (28.3%) | sub= 53 slim=67 tcap=26 emp=53 wpatch_sub=15 | th= 5718 (med  5754, >800:[port], /call:243.0) | rd= 7.0 ed= 4.6 rn=13.8 1stEd=15.1(96) edErr=9/323
b003/e0015       | n=120 sol=61 (50.8%) | sub= 69 slim=48 tcap= 4 emp=24 wpatch_sub=20 | th= 4256 (med  4268, >800: 786, /call:235.7) | rd= 6.4 ed= 2.4 rn=11.3 1stEd=12.2(106) edErr=16/210

[... 263 lines cut ...]

=== 3. STEP-BY-STEP TOOL SEQUENCE OF e0015's 2 LOSSES ([task] & [task]) ===
  [task] [base ]: c1(234t):run_command -> c2(26t):read_file -> c3(1404t):run_command -> c4(987t):run_command -> c5(42t):read_file -> c6(1672t):read_file -> c7(901t):read_file -> c8(573t):edit_file -> c9(16t):run_command -> c10(31t):run_command -> c11(56t):run_command -> c12(55t):run_command -> c13(8t):run_command -> c14(101t):run_command -> c15(156t):run_command -> c16(42t):run_command -> c17(98t):run_command -> c18(177t):run_command -> c19(57t):run_command
  [task] [e0015]: c1(294t):run_command -> c2(25t):read_file -> c3(1439t):run_command -> c4(193t):run_command -> c5(19t):read_file -> c6(1938t):run_command -> c7(19t):read_file -> c8(45t):read_file -> c9(237t):read_file -> c10(88t):run_command -> c11(795t):run_command -> c12(20t):read_file -> c13(43t):read_file -> c14(1728t):run_command -> c15(17t):read_file
  [task] [base ]: c1(60t):run_command -> c2(284t):run_command -> c3(108t):run_command -> c4(14t):run_command -> c5(38t):run_command -> c6(154t):run_command -> c7(122t):run_command -> c8(57t):run_command -> c9(44t):run_command -> c10(28t):run_command -> c11(82t):run_command -> c12(31t):run_command -> c13(138t):read_file -> c14(98t):run_com
[... 1249 characters cut ...]

:(bot-7f1f8de2-e8e3-480b-9b71-86492ff1fd30B!
	sessionID
The traces highlight a pattern in the unsolved tasks. Specifically, focusing on tasks within a particular context reveals a significant number flagged as having the wrong patch submitted. This warrants closer inspection. The next step is to examine the task submission process in relation to patch application within the identified context.


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2(bot-7f1f8de2-e8e3-480b-9b71-86492ff1fd30:)
{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/scratch/hold2.log'","WaitMsBeforeAsync":10000,"toolSummary":"Read hold2.log pre-test results on wrx90"}:'

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/scratch/hold2.log'","WaitMsBeforeAsync":10000,"toolSummary":"Read hold2.log pre-test results on wrx90"}:'
(Read hold2.log pre-test results on wrx90
k
\ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/scratch/hold2.log'
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/59/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:28:05-05:00
Completed At: 2026-11-13T14:28:07-05:00
Command exited with code 0.

Command output:
Hold 2 acquired gpu0.lock at Thu Nov 12 11:35:21 PM EST 2026
Unified Check Pass: 4 probe_b001 traces (51 pts) + 16 exact calls across 9 check tasks (187 pts) => 99 causal decision points total
Base arm finished: s1=20.0s, s2=92.8s (total 112.8s)
BASE      close all       n=  16  log p(close)   -0.259  top is close 0.938  log p(logged)   -0.259  top is logged 0.938
BASE      close depth<200 n=   8  log p(close)   -0.327  top is close 0.875  log p(logged)   -0.327  top is logged 0.875
BASE      close 200..799  n=   5  log p(close)   -0.076  top is close 1.000  log p(logged)   -0.076  top is logged 1.000
BASE      close 800+      n=   3  log p(close)   -0.383  top is close 1.000  log p(logged)   -0.383  top is logged 1.000
BASE      cont  all       n=  92  log p(close)  -19.372  top is close 0.000  log p(logged)   -0.250  top is logged 1.000
[... 337 lines cut ...]
Stopping before arm f4_main_ctrl=/home/keith/gemma-v2/wsp31/authors/gemini/scratch/cands/f4_main_ctrl: budget 880.0s reached

ALL PRE-TESTS SAVED TO /home/keith/gemma-v2/wsp31/authors/gemini/scratch/pretest_hold2.json in 927.0s
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2\ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/gemini/scratch/hold2.log':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/59/output.txt

{"EndLine":260,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\59\\output.txt","StartLine":65}:
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\59\output.txt
Created At: 2026-11-13T14:28:19-05:00
Completed At: 2026-11-13T14:28:19-05:00
Showing lines 65-260 of 264
65:     down: <|channel>(-0.002)   விளையா(-0.000)  path(-0.000)  block(-0.000)  > </(-0.000)
66:   step: P(<|channel>) 0.959->0.965  P(<|tool_call>) 0.000->0.000  P(<turn|>) 0.000->0.000
67:     up:   <|channel>(+0.006)  증(+0.000)                       (+0.000)  ht(+0.000)   आणखी(+0.000)
68:     down:  ئە(-0.003)   באמצעות(-0.001)                        (-0.001)  £(-0.000)  prov(-0.000)
69:   think: P(<|channel>) 0.000->0.000  P(<|tool_call>) 0.985->0.985  P(<turn|>) 0.000->0.000
70:     up:   //(+0.001)  <(+0.000)  {(+0.000)  ```(+0.000)   neighbourhood(+0.000)
71:     down: \\(-0.000)   thesis(-0.000)  call(-0.000)   Thesis(-0.000)  Thesis(-0.000)
72:   tool: P(call:run) 0.444->0.444  P(call:read) 0.408->0.409  P(call:edit) 0.094->0.094  P(call:write) 0.023->0.022  P(call:get) 0.000->0.000  P(call:submit) 0.031->0.031
73:     up:   read(+0.001)  grep(+0.000)  //(+0.000)  get(+0.000)  cat(+0.000)
74:     down: write(-0.001)  edit(-0.000)  run(-0.000)  lead(-0.000)   read(-0.000)
75: f1_038_ct close all       n=  16  log p(close)   -0.262  top is close 0.938  log p(logged)   -0.262  top is logged 0.938
76: f1_038_ct close depth<200 n=   8  log p(close)   -0.322  top is close 0.875  log p(logged)   -0.322  top is logged 0.875
77: f1_038_ct close 200..799  n=   5  log p(close)   -0.095  top is close 1.000  log p(logged)   -0.095  top is logged 1.000
78: f1_038_ct close 800+      n=   3  log p(close)   -0.382  top is close 1.000  log p(logged)   -0.382  top is logged 1.000
79: f1_038_ct cont  all       n=  92  log p(close)  -19.366  top is close 0.000  log p(logged)   -0.251  top is logged 1.000
[... 176 lines cut ...]
256: f4_main_e cont  200..799  n=  31  log p(close)  -26.852  top is close 0.000  log p(logged)   -0.429  top is logged 0.839
257: f4_main_e cont  800+      n=   3  log p(close)  -27.990  top is close 0.000  log p(logged)   -0.432  top is logged 1.000
258:   gate[pos_late_pre ]: {'n': 5, 'kl': 0.00266, 'kl_max': 0.0116, 'flip': 0.0, 'd_lp_logged': -0.0058, 'd_lp_edit': -1.1324, 'd_lp_read': -0.2996, 'd_lp_run': 0.7942, 'd_lp_sub': 0.1504, 'd_margin_edit_vs_read': -0.8328, 'edit_gt_read_base': 0.0, 'edit_gt_read_arm': 0.0, 'top_is_edit_base': 0.0, 'top_is_edit_arm': 0.0}
259:   gate[neg_early_pre]: {'n': 6, 'kl': 0.05094, 'kl_max': 0.3034, 'flip': 0.1667, 'd_lp_logged': -0.1233, 'd_lp_edit': -1.2548, 'd_lp_read': -1.2089, 'd_lp_run': -0.1441, 'd_lp_sub': -0.8113, 'd_margin_edit_vs_read': -0.0459, 'edit_gt_read_base': 0.3333, 'edit_gt_read_arm': 0.3333, 'top_is_edit_base': 0.3333, 'top_is_edit_arm': 0.3333}
260:   gate[neg_post_edit]: {'n': 5, 'kl': 6e-05, 'kl_max': 0.0002, 'flip': 0.0, 'd_lp_logged': 0.0002, 'd_lp_edit': -0.9061, 'd_lp_read': -0.1373, 'd_lp_run': -0.0123, 'd_lp_sub': -0.1717, 'd_margin_edit_vs_read': -0.7687, 'edit_gt_read_base': 0.4, 'edit_gt_read_arm': 0.4, 'top_is_edit_base': 0.2, 'top_is_edit_arm': 0.2}
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/59/output.txt
2type.googleapis.com/exa.cortex.core.tools.ReadFile
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\59\output.txt A(

:(bot-5ba34387-b3f3-4a32-a56a-22089b18f7ebB!
	sessionID
Reviewing the rules and strategic situation is essential. The evidence gathered must be synthesized into two high-signal entries for the next turn.


Champion interaction requires careful consideration, but the primary task remains creating two valid queue entries. The goal is to maximize training size for both entries, if possible, focusing on a pure training network edit with a hybrid/complementary second training entry. It is crucial to meet the rule requiring at least one training-sized entry.


Focusing on potential failure modes reveals a critical risk: directly reinforcing the existing `0015` entry could lead to overshooting if it becomes the champion. A new entry targeting orthogonal failure modes will cleanly stack on `0015` if it succeeds, while providing value if it falls short. This approach maximizes both potential outcomes.


The initial hypothesis regarding the `+10.0` pass focused on dosage or uniform layer application to noisy early layers. Examination of the `hold2.log` file, specifically lines 42-48, revealed a significant `turn` point for `0015` (edit `f1_038_edit`). The evidence shows a notable change in the P(<|channel>) value, suggesting the uniform application to all layers could be the root cause of the issue.


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The analysis reveals that amplifying early-layer writers disturbed "turn" and "step," despite `0015` gaining tasks in the subsequent rollout. This raises questions about the behavior of closeprobe's sampled points versus actual rollout outcomes. The discrepancy between the increased negative nats for "cont" at the closeprobe samples and the reduced thinking time in the real rollouts needs further examination.


[... 10 lines cut ...]

Determining the two largest remaining obstacles across base, `aa`, and `e0015` for targeted intervention. Comprehensive episode data review from `b001` (360 episodes) using available resources to build candidate mechanisms.

Checking file availability across specified directories and confirming GPU access to support further analysis.


2(bot-5ba34387-b3f3-4a32-a56a-22089b18f7eb:a
{"CommandLine":"ssh -o BatchMode=yes wrx90 'ls -lh /home/keith/gemma-v2/wsp31/authors/gemini/code/data /home/keith/gemma-v2/wsp31/authors/gemini/scratch; nvidia-smi --query-gpu=index,memory.used,memory.free,utilization.gpu --format=csv; lslocks | grep gpu0 || true'","WaitMsBeforeAsync":10000,"toolSummary":"Check data files, GPU 0 status, and locks on wrx90"}:^

{"CommandLine":"ssh -o BatchMode=yes wrx90 'ls -lh /home/keith/gemma-v2/wsp31/authors/gemini/code/data /home/keith/gemma-v2/wsp31/authors/gemini/scratch; nvidia-smi --query-gpu=index,memory.used,memory.free,utilization.gpu --format=csv; lslocks | grep gpu0 || true'","WaitMsBeforeAsync":10000,"toolSummary":"Check data files, GPU 0 status, and locks on wrx90"}:^
ssh -o BatchMode=yes wrx90 'ls -lh /home/keith/gemma-v2/wsp31/authors/gemini/code/data /home/keith/gemma-v2/wsp31/authors/gemini/scratch; nvidia-smi --query-gpu=index,memory.used,memory.free,utilization.gpu --format=csv; lslocks | grep gpu0 || true'
2Check data files, GPU 0 status, and locks on wrx90
Created At: 2026-11-13T14:29:18-05:00
Completed At: 2026-11-13T14:29:20-05:00
Command exited with code 0.

Command output:
/home/keith/gemma-v2/wsp31/authors/gemini/code/data:
total 27M
-rw-rw-r-- 1 keith keith 27M Nov 12 23:37 gemini_directions.pt
-rw-rw-r-- 1 keith keith 12K Nov 12 23:37 gemini_directions.pt.summary.json

/home/keith/gemma-v2/wsp31/authors/gemini/scratch:
total 704K
-rw-rw-r-- 1 keith keith 363K Nov 12 23:38 cands_train_size.json
-rw-rw-r-- 1 keith keith 1.3K Nov 12 23:23 hold1.log
-rw-rw-r-- 1 keith keith  30K Nov 12 23:50 hold2.log
-rw-rw-r-- 1 keith keith  88K Nov 12 23:50 pretest_hold2.json
-rw-rw-r-- 1 keith keith  51K Nov 12 23:53 size_dual-budget-rescue-r5.json
[... 25 lines cut ...]
index, memory.used [MiB], memory.free [MiB], utilization.gpu [%]
0, 39546 MiB, 57744 MiB, 100 %
1, 90512 MiB, 6775 MiB, 100 %
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'ls -lh /home/keith/gemma-v2/wsp31/authors/gemini/code/data /home/keith/gemma-v2/wsp31/authors/gemini/scratch; nvidia-smi --query-gpu=index,memory.used,memory.free,utilization.gpu --format=csv; lslocks | grep gpu0 || true':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/63/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'ps -o pid,etime,cmd -p 822414 --ppid 822414 || true; echo \"=== ATLAS.MD ===\"; cat /home/keith/gemma-v2/wsp31/interp/ATLAS.md'","WaitMsBeforeAsync":10000,"toolSummary":"Check GPU 0 lock holder elapsed time and read ATLAS.md"}:
ssh -o BatchMode=yes wrx90 'ps -o pid,etime,cmd -p 822414 --ppid 822414 || true; echo "=== ATLAS.MD ==="; cat /home/keith/gemma-v2/wsp31/interp/ATLAS.md'
6Check GPU 0 lock holder elapsed time and read ATLAS.md
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/65/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:29:34-05:00
Completed At: 2026-11-13T14:29:36-05:00
Command exited with code 0.

Command output:
    PID     ELAPSED CMD
 822414       12:31 flock -n -E 9 /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1740 ./readout_job.sh
 822415       12:31 timeout 1740 ./readout_job.sh
=== ATLAS.MD ===
# ATLAS: located and causally checked parts of Gemma 4 31B

Lane `wsp31/interp`. Only entries that were located **and** changed the model at agent decision points in a causal
test on tasks they were not fitted on are listed under "Confirmed". Everything else is under "Unconfirmed".

[... 234 lines cut ...]
- Cut-off episodes (52 of 136, 23% solved against 61%) differ from the rest by a few very long thoughts: median
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Reproduce: `python dirs/epi.py` (episode table), `python dirs/render_check.py`, `REPORT.md` sections 2 and 3.1.
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'ps -o pid,etime,cmd -p 822414 --ppid 822414 || true; echo "=== ATLAS.MD ==="; cat /home/keith/gemma-v2/wsp31/interp/ATLAS.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/65/output.txt

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PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/67/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:29:51-05:00
Completed At: 2026-11-13T14:29:53-05:00
Command exited with code 0.

Command output:
#!/usr/bin/env python
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[--preserve-kinds turn,tool,think] --direction FILE.pt|tok:ID|diff:KINDA-KINDB [--alpha 0.5] [--lam 1.0]
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result need GPU 0.
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layers) x its own norm along your direction d, while at the PRESERVE positions the write does not move:
[... 765 lines cut ...]
            self.terms[(l, mod)] = [((p[:, :r] * s[:r]).float(), q[:r].float())]
        self.notes.append(dict(op="reduce", max_rank=max_rank, matrices=len(out),
                               dropped_max=max(out.values()) if out else 0.0))
        return out
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
[line removed by the dashboard scrubber]
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/67/output.txt

{"EndLine":210,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain/1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\67\\output.txt","StartLine":60}:
wC:\Users\Owner\.gemini\antigravity-cli\brain/1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\67\output.txt
F
CCreated At: 2026-11-13T14:30:01-05:00
Completed At: 2026-11-13T14:30:01-05:00
Showing lines 60-210 of 626
60:     t = y + delta_out: u = w t / (w^2 + lam) with the unique lam > -min(w^2) that gives mean(u^2) = 1 (the global
61:     minimiser of a quadratic on a sphere), found by bisection in float64. raw' = c u with c > 0 chosen nearest to raw.
62:     Returns (R, reachable output change rms_out(raw') - y)."""
63:     raw, w = raw.double(), w.double()
64:     assert float(w.abs().min()) > 0, "a norm weight is exactly zero"
65:     y = rms_out(raw, w)
66:     wt = w * (y + delta_out.double())
67:     w2 = w * w
68:     f = lambda lam: (wt / (w2 + lam)).pow(2).mean(-1, keepdim=True) - 1.0     # decreasing in lam above -min(w^2)
69:     lo = torch.full(y.shape[:-1] + (1,), -float(w2.min()), dtype=torch.float64)
70:     hi = wt.pow(2).mean(-1, keepdim=True).sqrt() + float(w2.max())            # f(hi) < 0
71:     for _ in range(200):
72:         mid = (lo + hi) / 2
73:         pos = f(mid) > 0
[... 132 lines cut ...]
206:         u2 = u2 / u2.pow(2).mean(-1, keepdim=True).sqrt()
207:         closer += int(((w * u2 - t).norm(dim=-1) < best - 1e-9).sum())
208:     R0, _ = raw_targets(raw, w, torch.zeros_like(delta))
209:     e5 = float(R0.abs().max() / raw.abs().max())
210:     print(f"nearest reachable output: of 200 x {nk} random feasible outputs near the solution, {closer} are closer to "
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/67/output.txt
2type.googleapis.com/exa.cortex.core.tools.ReadFile
wC:\Users\Owner\.gemini\antigravity-cli\brain/1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\67\output.txt <(

:(bot-937c0d7c-deaa-4513-a30b-7a4aec910b28B!
	sessionID
?I'm thinking through how to approach this.


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The analysis focuses on discordant stage-1 tasks, revealing a 70.0% success rate compared to the reference's 43.3%.  Specifically, entries `0017` and `0018` are excluded from resubmission due to negative impacts on `pos_late_pre`.  Examination of `0016` shows nuanced results: a positive log probability change overall and significant improvements in handling close-depth and continuous cases, despite some drops in "top is close" metrics.


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Checking the algebraic identity of GeGLU is critical. The concern is whether two "quiet" neurons, with specific positive and negative gating and update weights, can replicate the GeGLU function. The exact algebraic identity must be confirmed for this approach to work; the impact of the down weight's sign requires careful verification.


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[... 37 lines cut ...]
The analysis reveals crucial harness behavior: episodes timing out *after* producing a good `git diff` still register as solved (`sol=1`), even if `submit_patch` is not called (`sub=0`). This means that premature submission of an edit can be detrimental, locking in a potentially suboptimal solution. Conversely, if an episode reaches the timeout *before* generating an edit, it's guaranteed to have a zero solve rate, as is the case for episodes that hit the tool call limit before editing. The core issue is identifying edits before the timeout.


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2(bot-937c0d7c-deaa-4513-a30b-7a4aec910b28:
{"CommandLine":"ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -c \"\nimport sys; sys.path.insert(0, \\\"/home/keith/gemma-v2/wsp31/authors/gemini/code\\\")\nfrom analyze_b002_b003 import all_eps, by_task_uned, OWED_31\nfor arm in (\\\"base\\\", \\\"aa\\\", \\\"e0015\\\"):\n    eps = [e for e in all_eps[(\\\"b003\\\", arm)].values() if e[\\\"valid_89\\\"]]\n    gt800 = sum(1 for e in eps if e[\\\"max_think\\\"] \u003e= 800)\n    gt1500 = sum(1 for e in eps if e[\\\"max_think\\\"] \u003e= 1500)\n    gt2500 = sum(1 for e in eps if e[\\\"max_think\\\"] \u003e= 2500)\n    uncl = sum(e[\\\"unclosed_think\\\"] for e in eps)\n    no_ed = sum(1 for e in eps if e[\\\"n_edit\\\"] == 0)\n    print(f\\\"b003/{arm:5s}[89]: sol={sum(e[\\x27resolved\\x27] for e in eps):2d} emp={sum(e[\\x27empty_patch\\x27] for e in eps):2d} no_ed={no_ed:2d} maxTh\u003e=800:{gt800:2d} \u003e=1500:{gt1500:2d} \u003e=2500:{gt2500:2d} unclosed_th={uncl:2d} tcap={sum(e[\\x27at_tc_cap\\x27] for e in eps):2d}\\\")\ndisc89 = [iid for iid, es in by_task_uned.items() if iid not in OWED_31 and len(es)==7 and 1 \u003c= sum(x[\\\"resolved\\\"] for x in es) \u003c= 6]\nprint(\\\"VALID_89 discordant tasks:\\\", len(disc89))\nb3b, b3a, b3e = all_eps[(\\\"b003\\\",\\\"base\\\")], all_eps[(\\\"b003\\\",\\\"aa\\\")], all_eps[(\\\"b003\\\",\\\"e0015\\\")]\nprint(\\\"On VALID_89 discordant: base=\\\", sum(b3b[i][\\\"resolved\\\"] for i in disc89), \\\"aa=\\\", sum(b3a[i][\\\"resolved\\\"] for i in disc89), \\\"e0015=\\\", sum(b3e[i][\\\"resolved\\\"] for i in disc89))\n\"'","WaitMsBeforeAsync":10000,"toolSummary":"Check VALID_89 thought-depth \u0026 empty-patch telemetry in b003"}:

{"CommandLine":"ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -c \"\nimport sys; sys.path.insert(0, \\\"/home/keith/gemma-v2/wsp31/authors/gemini/code\\\")\nfrom analyze_b002_b003 import all_eps, by_task_uned, OWED_31\nfor arm in (\\\"base\\\", \\\"aa\\\", \\\"e0015\\\"):\n    eps = [e for e in all_eps[(\\\"b003\\\", arm)].values() if e[\\\"valid_89\\\"]]\n    gt800 = sum(1 for e in eps if e[\\\"max_think\\\"] \u003e= 800)\n    gt1500 = sum(1 for e in eps if e[\\\"max_think\\\"] \u003e= 1500)\n    gt2500 = sum(1 for e in eps if e[\\\"max_think\\\"] \u003e= 2500)\n    uncl = sum(e[\\\"unclosed_think\\\"] for e in eps)\n    no_ed = sum(1 for e in eps if e[\\\"n_edit\\\"] == 0)\n    print(f\\\"b003/{arm:5s}[89]: sol={sum(e[\\x27resolved\\x27] for e in eps):2d} emp={sum(e[\\x27empty_patch\\x27] for e in eps):2d} no_ed={no_ed:2d} maxTh\u003e=800:{gt800:2d} \u003e=1500:{gt1500:2d} \u003e=2500:{gt2500:2d} unclosed_th={uncl:2d} tcap={sum(e[\\x27at_tc_cap\\x27] for e in eps):2d}\\\")\ndisc89 = [iid for iid, es in by_task_uned.items() if iid not in OWED_31 and len(es)==7 and 1 \u003c= sum(x[\\\"resolved\\\"] for x in es) \u003c= 6]\nprint(\\\"VALID_89 discordant tasks:\\\", len(disc89))\nb3b, b3a, b3e = all_eps[(\\\"b003\\\",\\\"base\\\")], all_eps[(\\\"b003\\\",\\\"aa\\\")], all_eps[(\\\"b003\\\",\\\"e0015\\\")]\nprint(\\\"On VALID_89 discordant: base=\\\", sum(b3b[i][\\\"resolved\\\"] for i in disc89), \\\"aa=\\\", sum(b3a[i][\\\"resolved\\\"] for i in disc89), \\\"e0015=\\\", sum(b3e[i][\\\"resolved\\\"] for i in disc89))\n\"'","WaitMsBeforeAsync":10000,"toolSummary":"Check VALID_89 thought-depth \u0026 empty-patch telemetry in b003"}:
ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -c "
import sys; sys.path.insert(0, \"/home/keith/gemma-v2/wsp31/authors/gemini/code\")
from analyze_b002_b003 import all_eps, by_task_uned, OWED_31
for arm in (\"base\", \"aa\", \"e0015\"):
    eps = [e for e in all_eps[(\"b003\", arm)].values() if e[\"valid_89\"]]
    gt800 = sum(1 for e in eps if e[\"max_think\"] >= 800)
    gt1500 = sum(1 for e in eps if e[\"max_think\"] >= 1500)
    gt2500 = sum(1 for e in eps if e[\"max_think\"] >= 2500)
    uncl = sum(e[\"unclosed_think\"] for e in eps)
    no_ed = sum(1 for e in eps if e[\"n_edit\"] == 0)
    print(f\"b003/{arm:5s}[89]: sol={sum(e[\x27resolved\x27] for e in eps):2d} emp={sum(e[\x27empty_patch\x27] for e in eps):2d} no_ed={no_ed:2d} maxTh>=800:{gt800:2d} >=1500:{gt1500:2d} >=2500:{gt2500:2d} unclosed_th={uncl:2d} tcap={sum(e[\x27at_tc_cap\x27] for e in eps):2d}\")
disc89 = [iid for iid, es in by_task_uned.items() if iid not in OWED_31 and len(es)==7 and 1 <= sum(x[\"resolved\"] for x in es) <= 6]
print(\"VALID_89 discordant tasks:\", len(disc89))
b3b, b3a, b3e = all_eps[(\"b003\",\"base\")], all_eps[(\"b003\",\"aa\")], all_eps[(\"b003\",\"e0015\")]
print(\"On VALID_89 discordant: base=\", sum(b3b[i][\"resolved\"] for i in disc89), \"aa=\", sum(b3a[i][\"resolved\"] for i in disc89), \"e0015=\", sum(b3e[i][\"resolved\"] for i in disc89))
"'
<Check VALID_89 thought-depth & empty-patch telemetry in b003
Created At: 2026-11-13T14:32:18-05:00
Completed At: 2026-11-13T14:32:24-05:00
[... 38 lines cut ...]
    no_ed = sum(1 for e in eps if e[\"n_edit\"] == 0)
    print(f\"b003/{arm:5s}[89]: sol={sum(e[\x27resolved\x27] for e in eps):2d} emp={sum(e[\x27empty_patch\x27] for e in eps):2d} no_ed={no_ed:2d} maxTh>=800:{gt800:2d} >=1500:{gt1500:2d} >=2500:{gt2500:2d} unclosed_th={uncl:2d} tcap={sum(e[\x27at_tc_cap\x27] for e in eps):2d}\")
disc89 = [iid for iid, es in by_task_uned.items() if iid not in OWED_31 and len(es)==7 and 1 <= sum(x[\"resolved\"] for x in es) <= 6]
print(\"VALID_89 discordant tasks:\", len(disc89))
b3b, b3a, b3e = all_eps[(\"b003\",\"base\")], all_eps[(\"b003\",\"aa\")], all_eps[(\"b003\",\"e0015\")]
print(\"On VALID_89 discordant: base=\", sum(b3b[i][\"resolved\"] for i in disc89), \"aa=\", sum(b3a[i][\"resolved\"] for i in disc89), \"e0015=\",
[... 214 characters cut ...]

{"Content":"#!/usr/bin/env python3\nimport sys\nsys.path.insert(0, \"/home/keith/gemma-v2/wsp31/authors/gemini/code\")\nfrom analyze_b002_b003 import all_eps, by_task_uned, OWED_31\n\nfor batch, arm in ((\"b001\", \"base\"), (\"b002\", \"base\"), (\"b003\", \"base\"), (\"b003\", \"aa\"), (\"b003\", \"e0015\")):\n    eps = [e for e in all_eps[(batch, arm)].values() if e[\"valid_89\"]]\n    gt800 = sum(1 for e in eps if e[\"max_think\"] \u003e= 800)\n    gt1500 = sum(1 for e in eps if e[\"max_think\"] \u003e= 1500)\n    gt2500 = sum(1 for e in eps if e[\"max_think\"] \u003e= 2500)\n    uncl = sum(e[\"unclosed_think\"] for e in eps)\n    no_ed = sum(1 for e in eps if e[\"n_edit\"] == 0)\n    print(f\"{batch}/{arm:5s}[89]: sol={sum(e['resolved'] for e in eps):2d} emp={sum(e['empty_patch'] for e in eps):2d} \"\n          f\"no_ed={no_ed:2d} maxTh\u003e=800:{gt800:2d} \u003e=1500:{gt1500:2d} \u003e=2500:{gt2500:2d} unclosed_th={uncl:2d} tcap={sum(e['at_tc_cap'] for e in eps):2d}\")\n\ndisc89 = [iid for iid, es in by_task_uned.items() if iid not in OWED_31 and len(es) == 7 and 1 \u003c= sum(x[\"resolved\"] for x in es) \u003c= 6]\nprint(\"VALID_89 discordant tasks:\", len(disc89))\nb3b, b3a, b3e = all_eps[(\"b003\", \"base\")], all_eps[(\"b003\", \"aa\")], all_eps[(\"b003\", \"e0015\")]\nprint(\"On VALID_89 discordant: base=\", sum(b3b[i][\"resolved\"] for i in disc89),\n      \"aa=\", sum(b3a[i][\"resolved\"] for i in disc89),\n      \"e0015=\", sum(b3e[i][\"resolved\"] for i in disc89))\n\nprint(\"\\n=== ALL 12 VALID_89 EMPTY-PATCH EPISODES IN b003/e0015 ===\")\nfor iid, e in sorted(b3e.items()):\n    if e[\"valid_89\"] and e[\"empty_patch\"]:\n        k7 = sum(x[\"resolved\"] for x in by_task_uned[iid])\n        print(f\"  {iid:52s} | k7={k7}/7 | dur={e['dur']:5.1f} calls={e['calls']:2d} tc={e['tc']:2d} th={e['tot_think']:5d}(max {e['max_think']:4d}, uncl={e['unclosed_think']}) rd={e['n_read']:2d} ed={e['n_edit']:2d} rn={e['n_run']:2d}\")\n","Overwrite":true,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\check_valid89_details.py"}:
>C:\Users\Owner\wsp31_loop\work\gemini\check_valid89_details.py
#!/usr/bin/env python3
import sys
sys.path.insert(0, "/home/keith/gemma-v2/wsp31/authors/gemini/code")
from analyze_b002_b003 import all_eps, by_task_uned, OWED_31

for batch, arm in (("b001", "base"), ("b002", "base"), ("b003", "base"), ("b003", "aa"), ("b003", "e0015")):
    eps = [e for e in all_eps[(batch, arm)].values() if e["valid_89"]]
    gt800 = sum(1 for e in eps if e["max_think"] >= 800)
    gt1500 = sum(1 for e in eps if e["max_think"] >= 1500)
    gt2500 = sum(1 for e in eps if e["max_think"] >= 2500)
    uncl = sum(e["unclosed_think"] for e in eps)
    no_ed = sum(1 for e in eps if e["n_edit"] == 0)
    print(f"{batch}/{arm:5s}[89]: sol={sum(e['resolved'] for e in eps):2d} emp={sum(e['empty_patch'] for e in eps):2d} "
          f"no_ed={no_ed:2d} maxTh>=800:{gt800:2d} >=1500:{gt1500:2d} >=2500:{gt2500:2d} unclosed_th={uncl:2d} tcap={sum(e['at_tc_cap'] for e in eps):2d}")

disc89 = [iid for iid, es in by_task_uned.items() if iid not in OWED_31 and len(es) == 7 and 1 <= sum(x["resolved"] for x in es) <= 6]
print("VALID_89 discordant tasks:", len(disc89))
b3b, b3a, b3e = all_eps[("b003", "base")], all_eps[("b003", "aa")], all_eps[("b003", "e0015")]
[... 49 lines cut ...]
I
Eprint("\n=== ALL 12 VALID_89 EMPTY-PATCH EPISODES IN b003/e0015 ===")
.
*    if e["valid_89"] and e["empty_patch"]:
>
:        k7 = sum(x["resolved"] for x in by_task_uned[iid])
print(f"  {iid:52s} | k7={k7}/7 | dur={e['dur']:5.1f} calls={e['calls']:2d} tc={e['tc']:2d} th={e['tot_think']:5d}(max {e['max_think']:4d}, uncl={e['unclosed_think']}) rd={e['n_read']:2d} ed={e['n_edit']:2d} rn={e['n_run']:2d}")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/73/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\check_valid89_details.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_valid89_details.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo \"GPU0_FREE\"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_valid89_details.py'","WaitMsBeforeAsync":10000,"toolSummary":"Check GPU0 lock and VALID_89 failure telemetry"}:
,1993e737-e49e-4f87-9e50-f234f7917537/task-75
}file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-75.log
[flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
"
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_valid89_details.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_valid89_details.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_valid89_details.py':.Check GPU0 lock and VALID_89 failure telemetryB
.Check GPU0 lock and VALID_89 failure telemetry
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_valid89_details.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_valid89_details.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_valid89_details.py'
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/75/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
=== ALL 120 EPISODES PER ARM ===
b001/base        | n=120 sol=60 (50.0%) | sub= 92 slim=26 tcap=22 emp=20 wpatch_sub=30 | th= 5525 (med  5252, >800:[port], /call:261.0) | rd= 6.9 ed= 2.1 rn=12.6 1stEd=12.5(110) edErr=18/163
b001/aa          | n=120 sol=60 (50.0%) | sub= 97 slim=23 tcap=22 emp=22 wpatch_sub=28 | th= 5458 (med  5305, >800:[port], /call:257.4) | rd= 7.7 ed= 2.0 rn=12.2 1stEd=13.0(108) edErr=22/161
b001/zero        | n=120 sol=65 (54.2%) | sub= 93 slim=26 tcap=21 emp=18 wpatch_sub=27 | th= 5536 (med  5258, >800:[port], /call:263.3) | rd= 7.0 ed= 2.0 rn=12.7 1stEd=12.3(112) edErr=23/136
b002/base        | n=120 sol=60 (50.0%) | sub= 88 slim=29 tcap=14 emp=21 wpatch_sub=26 | th= 5148 (med  5193, >800:[port], /call:272.6) | rd= 7.1 ed= 1.9 rn=11.4 1stEd=11.7(107) edErr=16/126
[... 211 lines cut ...]
  [task]                                 | k7=7/7 | dur=454.7 calls=28 tc=28 th= 6021(max 1218, uncl=0) rd= 6 ed= 0 rn=22
  rubik__radon.54b88e58.func_basic__8pbqxg0r           | k7=2/7 | dur=488.6 calls= 8 tc= 7 th= 6431(max 4095, uncl=0) rd= 4 ed= 0 rn= 3
  [task]                       | k7=0/7 | dur=490.2 calls=30 tc=25 th= 5377(max 1064, uncl=0) rd= 7 ed= 5 rn=18
  [task]                               | k7=4/7 | dur=480.5 calls=17 tc=17 th= 5061(max  907, uncl=0) rd= 8 ed= 0 rn= 9
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_valid89_details.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_valid89_details.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_valid89_details.py':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/75/output.txt

l{"EndLine":85,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_records_and_queue.py","StartLine":1}:
@C:\Users\Owner\wsp31_loop\work\gemini\write_records_and_queue.py
#
!Created At: 2026-11-13T14:33:13-05:00
Completed At: 2026-11-13T14:33:13-05:00
Showing lines 1-85 of 365
1: #!/usr/bin/env python3
2: """write_records_and_queue.py: Formats comprehensive, exact record.md files from measured
3: fit_and_build.py + pretest_hold2.py + train_size.py outputs, verifies all runner constraints,
4: and marks entries READY one at a time.
5: """
6: import argparse, json, os, sys
7: from pathlib import Path
8: 
9: import package_entry as pkg
10: 
11: R = Path("/home/keith/gemma-v2")
12: G = R / "wsp31" / "authors" / "gemini"
13: CODE = G / "code"
14: SCR = G / "scratch"
[... 67 lines cut ...]
82:             )
83:         else:
84:             lines.append(
85:                 f"| {bk} | {r['n']} | {r['kl']:.5f} | {r['flip']:.4f} | {r['d_lp_edit']:+.4f} | "
N
Hfile:///C:/Users/Owner/wsp31_loop/work/gemini/write_records_and_queue.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
@C:\Users\Owner\wsp31_loop\work\gemini\write_records_and_queue.py

n{"EndLine":220,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_records_and_queue.py","StartLine":86}:
@C:\Users\Owner\wsp31_loop\work\gemini\write_records_and_queue.py
n
lCreated At: 2026-11-13T14:33:24-05:00
Completed At: 2026-11-13T14:33:24-05:00
Showing lines 86-220 of 365
86:                 f"{r['d_lp_read']:+.4f} | {r['d_lp_sub']:+.4f} | {r['d_margin_edit_vs_read']:+.4f} | "
87:                 f"{r['edit_gt_read_base']:.3f} -> {r['edit_gt_read_arm']:.3f} |"
88:             )
89:     return "\n".join(lines)
90: 
91: 
[line removed by the dashboard scrubber]
93:     base_cp = pre["base_closeprobe"]
[line removed by the dashboard scrubber]
[line removed by the dashboard scrubber]
96:     f1_auc = fit_sum["f1_heldout_auc"]
97:     f2_auc = fit_sum["f2_heldout_auc"]
98:     f3_sum = fit_sum["f3_heldout_summary"]
99:     pct_net = info["size_edit"]["net_rel"] * 100.0
[... 117 lines cut ...]
217: 
218: Behaviour that should move (stage 1, 120 screening tasks vs same-batch champion):
[line removed by the dashboard scrubber]
220: - 7.5-minute session-limit cutoffs: down by 15% to 35% relative to reference;
O
Hfile:///C:/Users/Owner/wsp31_loop/work/gemini/write_records_and_queue.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
@C:\Users\Owner\wsp31_loop\work\gemini\write_records_and_queue.py V(

R[Message] timestamp=2026-11-13T19:33:13Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-75 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-75" finished with result:
The tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/75/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
=== ALL 120 EPISODES PER ARM ===
b001/base        | n=120 sol=60 (50.0%) | sub= 92 slim=26 tcap=22 emp=20 wpatch_sub=30 | th= 5525 (med  5252, >800:[port], /call:261.0) | rd= 6.9 ed= 2.1 rn=12.6 1stEd=12.5(110) edErr=18/163
b001/aa          | n=120 sol=60 (50.0%) | sub= 97 slim=23 tcap=22 emp=22 wpatch_sub=28 | th= 5458 (med  5305, >800:[port], /call:257.4) | rd= 7.7 ed= 2.0 rn=12.2 1stEd=13.0(108) edErr=22/161
b001/zero        | n=120 sol=65 (54.2%) | sub= 93 slim=26 tcap=21 emp=18 wpatch_sub=27 | th= 5536 (med  5258, >800:[port], /call:263.3) | rd= 7.0 ed= 2.0 rn=12.7 1stEd=12.3(112) edErr=23/136
b002/base        | n=120 sol=60 (50.0%) | sub= 88 slim=29 tcap=14 emp=21 wpatch_sub=26 | th= 5148 (med  5193, >800:[port], /call:272.6) | rd= 7.1 ed= 1.9 rn=11.4 1stEd=11.7(107) edErr=16/126
b002/aa          | n=120 sol=62 (51.7%) | sub= 83 slim=35 tcap=15 emp=21 wpatch_sub=26 | th= 5042 (med  4990, >800:[port], /call:256.3) | rd= 6.9 ed= 1.9 rn=11.9 1stEd=11.6(108) edErr=17/135
b002/e0008       | n=120 sol=51 (42.5%) | sub= 73 slim=44 tcap=27 emp=34 wpatch_sub=24 | th= 5199 (med  5210, >800: 956, /call:248.6) | rd= 6.6 ed= 1.6 rn=14.2 1stEd=14.4(99) edErr=24/109
b002/e0011       | n=120 sol=51 (42.5%) | sub= 68 slim=49 tcap=10 emp=31 wpatch_sub=22 | th= 5739 (med  5651, >800:[port], /call:261.2) | rd= 6.2 ed= 5.0 rn=12.9 1stEd=13.0(105) edErr=4/307
b003/base        | n=120 sol=58 (48.3%) | sub= 74 slim=44 tcap=10 emp=27 wpatch_sub=21 | th= 4649 (med  4892, >800:[port], /call:276.5) | rd= 6.5 ed= 1.7 rn=10.8 1stEd=11.5(97) edErr=13/122
b003/aa          | n=120 sol=52 (43.3%) | sub= 71 slim=45 tcap=13 emp=32 wpatch_sub=21 | th= 4533 (med  4559, >800: 972, /call:258.2) | rd= 6.8 ed= 2.0 rn=11.0 1stEd=11.4(97) edErr=16/151
b003/e0012       | n=120 sol=34 (28.3%) | sub= 53 slim=67 tcap=26 emp=53 wpatch_sub=15 | th= 5718 (med  5754, >800:[port], /call:243.0) | rd= 7.0 ed= 4.6 rn=13.8 1stEd=15.1(96) edErr=9/323
b003/e0015       | n=120 sol=61 (50.8%) | sub= 69 slim=48 tcap= 4 emp=24 wpatch_sub=20 | th= 4256 (med  4268, >800: 786, /call:235.7) | rd= 6.4 ed= 2.4 rn=11.3 1stEd=12.2(106) edErr=16/210
[... 311 lines cut ...]
  [task]                               | k7=0/7 | dur=470.1 calls=15 tc=14 th= 6154(max 1722, uncl=0) rd= 9 ed= 1 rn= 5
  [task]                                | k7=7/7 | dur=457.4 calls=15 tc=15 th= 6900(max 1938, uncl=0) rd= 8 ed= 0 rn= 7
  [task]                                 | k7=7/7 | dur=454.7 calls=28 tc=28 th= 6021(max 1218, uncl=0) rd= 6 ed= 0 rn=22
  rubik__radon.54b88e58.func_basic__8pbqxg0r           | k7=2/7 | dur=488.6 calls= 8 tc= 7 th= 6431(max 4095, uncl=0) rd= 4 ed= 0 rn= 3
  [task]                       | k7=0/7 | dur=490.2 calls=30 tc=25 th= 5377(max 1064, uncl=0) rd= 7 ed= 5 rn=18
  [task]                               | k7=4/7 | dur=480.5 calls=17 tc=17 th= 5061(max  907, uncl=0) rd= 8 ed= 0 rn= 9

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-75.log

[line removed by the dashboard scrubber]
@C:\Users\Owner\wsp31_loop\work\gemini\inspect_e0015_anomalies.py
#!/usr/bin/env python3
"""Inspect every call anomaly in b003/e0015 vs b003/base & aa:
1. Calls where comp[0] != 100 (<|channel>) -> did L0..19 turn/step collateral cause garbage turn starts?!
2. Calls where 100 in comp and 101 not in comp (unclosed_think) -> length=4096 or something else?
3. Malformed tool calls or empty responses!
"""
import glob, json, os, sys
sys.path.insert(0, "/home/keith/gemma-v2/wsp31/tools")
import wlib

R = "/home/keith/gemma-v2"
tok = wlib.tok()

for arm in ("base", "aa", "e0015", "e0012"):
    rdir = f"{R}/results/wsp31/batches/b003/{arm}/rebench/shard0_gpu0/requests"
    tfile = f"{R}/results/wsp31/batches/b003/{arm}/rebench/shard0_gpu0/task_results.jsonl"
    res_map = {json.loads(l)["instance_id"]: json.loads(l) for l in open(tfile)}
    tot_calls = 0
[... 89 lines cut ...]
@
<    print(f"\n=== b003/{arm} (total calls={tot_calls}) ===")
print(f"  comp[0] != 100 (<|channel> missing at turn start): {len(no_100)} calls across {len({x[0] for x in no_100})} tasks")
y
u    print(f"  100 present, 101 (<channel|>) missing: {len(no_101)} calls across {len({x[0] for x in no_101})} tasks")
s
o    print(f"  101 present, no parsed tool_calls: {len(no_tc)} calls across {len({x[0] for x in no_tc})} tasks")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/82/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\inspect_e0015_anomalies.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_e0015_anomalies.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo \"GPU0_FREE\"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_e0015_anomalies.py'","WaitMsBeforeAsync":10000,"toolSummary":"Inspect call anomalies in b003/e0015 vs base and aa"}:
,1993e737-e49e-4f87-9e50-f234f7917537/task-84
}file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-84.log
<truncated 94 lines>
ookiecutter.b4451231.lm_rewrite__byoy8vaf.jsonl', False, 11, 20, 'STOP', '\'<|tool_call>call the_read_file{filepath: "cookiecutter/main.py"}<tool_call|><|to\'')
    ('cool-RR__PySnooper.57472b46.lm_rewrite__031xvy9b.jsonl', False, 6, 449, 'STOP', '\'<|tool_call>call: run_command{command:<|"|>python3 - <<\\\'PY\\\'\\nimport pysnooper\\nimp\'')
    ('[task].jsonl', False, 9, 84, 'STOP', '\'<|tool_call>call edit_file{filepath: "mappyfile/schemas/composite.json", old_str\'')
    ('jsvine__pdfplumber.02ff4313.lm_rewrite__1nhq0adm.jsonl', False, 7, 21, 'STOP', '\'<|tool_call>call:read_file{filepath:<|"|>pdfplumber/structure.py`}]<tool_call|><\'')
    ('kayak__pypika.1c9646f0.func_basic__7dnlb52y.jsonl', False, 19, 35, 'STOP', '\'<|tool_call>call: run_command{command: "grep -A 20 \\\'class SQLLiteQueryBuilder\\\' p\'')
    ('[task].jsonl', False, 10, 312, 'STOP', '\'<|tool_call>call edit_file{filepath:<|"|>polyfactory/utils/helpers.py`, new_stri\'')
"
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\inspect_e0015_anomalies.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_e0015_anomalies.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_e0015_anomalies.py':3Inspect call anomalies in b003/e0015 vs base and aaB
3Inspect call anomalies in b003/e0015 vs base and aa
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\inspect_e0015_anomalies.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_e0015_anomalies.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_e0015_anomalies.py'
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/84/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
[... 172 lines cut ...]
    ('[task].jsonl', False, 9, 84, 'STOP', '\'<|tool_call>call edit_file{filepath: "mappyfile/schemas/composite.json", old_str\'')
    ('jsvine__pdfplumber.02ff4313.lm_rewrite__1nhq0adm.jsonl', False, 7, 21, 'STOP', '\'<|tool_call>call:read_file{filepath:<|"|>pdfplumber/structure.py`}]<tool_call|><\'')
    ('kayak__pypika.1c9646f0.func_basic__7dnlb52y.jsonl', False, 19, 35, 'STOP', '\'<|tool_call>call: run_command{command: "grep -A 20 \\\'class SQLLiteQueryBuilder\\\' p\'')
    ('[task].jsonl', False, 10, 312, 'STOP', '\'<|tool_call>call edit_file{filepath:<|"|>polyfactory/utils/helpers.py`, new_stri\'')
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\inspect_e0015_anomalies.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_e0015_anomalies.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/inspect_e0015_anomalies.py':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993
[... 70 characters cut ...]

{"EndLine":250,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-84.log","StartLine":1}:
uC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-84.log
s
qCreated At: 2026-11-13T14:34:29-05:00
Completed At: 2026-11-13T14:34:29-05:00
Showing lines 1-99 of 99
1: flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
2: 
3: === b003/base (total calls=2366) ===
4:   comp[0] != 100 (<|channel> missing at turn start): 4 calls across 3 tasks
5:     ('pallets__markupsafe.620c06c9.func_basic__fpb7w0tc.jsonl', False, 22, 9, 'STOP', "'<|tool_call>call:submit_patch{}<tool_call|><|tool_response>'")
6:     ('[task].jsonl', False, 21, 39, 'STOP', '\'<|tool_call>call:run_command{command:<|"|>pytest mlxtend/preprocessing/tests/tes\'')
7:     ('[task].jsonl', False, 23, 17, 'STOP', '\'<|tool_call>call:read_file{filepath:<|"|>requirements.txt<|"|>}<tool_call|><|too\'')
8:     ('[task].jsonl', False, 9, 44, 'STOP', '\'<|tool_call>call:read_file{end_line:775,filepath:<|"|>src/zope/configuration/\'')
9:   100 present, 101 (<channel|>) missing: 2 calls across 2 tasks
10:     ('pallets__markupsafe.620c06c9.func_basic__fpb7w0tc.jsonl', False, 19, 32, 'STOP', '\'<|channel>call:run_command{command:<|"|>\'', '\' -q --tb=short --no-header<|"|>}<tool_call|><|tool_response>\'')
11:     ('[task].jsonl', False, 7, 368, 'STOP', "'<|channel>thought\\nPerfect. This preserve'", '\'    # Let\\\'s test this.\\nPY\\n<|"|>}<tool_call|><|tool_response>\'')
12:   101 present, no parsed tool_calls: 6 calls across 6 tasks
13:     ('[task].jsonl', False, 6, 48, 'STOP', '\'<|tool_call>call edit_file{filepath:<|"|>billiard/einfo.py<|"|>,new_string:<|"|>\'')
14:     ('[task].jsonl', False, 9, 253, 'STOP', '\'<|tool_call>call edit_file{filepath:<|"|>kinto_http/session.py<|"|>,new_string:<\'')
[... 80 lines cut ...]
95:     ('cool-RR__PySnooper.57472b46.lm_rewrite__031xvy9b.jsonl', False, 6, 449, 'STOP', '\'<|tool_call>call: run_command{command:<|"|>python3 - <<\\\'PY\\\'\\nimport pysnooper\\nimp\'')
96:     ('[task].jsonl', False, 9, 84, 'STOP', '\'<|tool_call>call edit_file{filepath: "mappyfile/schemas/composite.json", old_str\'')
97:     ('jsvine__pdfplumber.02ff4313.lm_rewrite__1nhq0adm.jsonl', False, 7, 21, 'STOP', '\'<|tool_call>call:read_file{filepath:<|"|>pdfplumber/structure.py`}]<tool_call|><\'')
98:     ('kayak__pypika.1c9646f0.func_basic__7dnlb52y.jsonl', False, 19, 35, 'STOP', '\'<|tool_call>call: run_command{command: "grep -A 20 \\\'class SQLLiteQueryBuilder\\\' p\'')
99:     ('[task].jsonl', False, 10, 312, 'STOP', '\'<|tool_call>call edit_file{filepath:<|"|>polyfactory/utils/helpers.py`, new_stri\'')
}file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-84.log
2type.googleapis.com/exa.cortex.core.tools.ReadFile
uC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-84.log

R[Message] timestamp=2026-11-13T19:34:19Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-84 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-84" finished with result:
The tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/84/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock

=== b003/base (total calls=2366) ===
  comp[0] != 100 (<|channel> missing at turn start): 4 calls across 3 tasks
    ('pallets__markupsafe.620c06c9.func_basic__fpb7w0tc.jsonl', False, 22, 9, 'STOP', "'<|tool_call>call:submit_patch{}<tool_call|><|tool_response>'")
    ('[task].jsonl', False, 21, 39, 'STOP', '\'<|tool_call>call:run_command{command:<|"|>pytest mlxtend/preprocessing/tests/tes\'')
    ('[task].jsonl', False, 23, 17, 'STOP', '\'<|tool_call>call:read_file{filepath:<|"|>requirements.txt<|"|>}<tool_call|><|too\'')
    ('[task].jsonl', False, 9, 44, 'STOP', '\'<|tool_call>call:read_file{end_line:775,filepath:<|"|>src/zope/configuration/\'')
  100 present, 101 (<channel|>) missing: 2 calls across 2 tasks
    ('pallets__markupsafe.620c06c9.func_basic__fpb7w0tc.jsonl', False, 19, 32, 'STOP', '\'<|channel>call:run_command{command:<|"|>\'', '\' -q --tb=short --no-header<|"|>}<tool_call|><|tool_response>\'')
    ('[task].jsonl', False, 7, 368, 'STOP', "'<|channel>thought\\nPerfect. This preserve'", '\'    # Let\\\'s test this.\\nPY\\n<|"|>}<tool_call|><|tool_response>\'')
  101 present, no parsed tool_calls: 6 calls across 6 tasks
    ('[task].jsonl', False, 6, 48, 'STOP', '\'<|tool_call>call edit_file{filepath:<|"|>billiard/einfo.py<|"|>,new_string:<|"|>\'')
[... 246 lines cut ...]
    ('cookiecutter__cookiecutter.b4451231.lm_rewrite__byoy8vaf.jsonl', False, 11, 20, 'STOP', '\'<|tool_call>call the_read_file{filepath: "cookiecutter/main.py"}<tool_call|><|to\'')
    ('cool-RR__PySnooper.57472b46.lm_rewrite__031xvy9b.jsonl', False, 6, 449, 'STOP', '\'<|tool_call>call: run_command{command:<|"|>python3 - <<\\\'PY\\\'\\nimport pysnooper\\nimp\'')
    ('[task].jsonl', False, 9, 84, 'STOP', '\'<|tool_call>call edit_file{filepath: "mappyfile/schemas/composite.json", old_str\'')
    ('jsvine__pdfplumber.02ff4313.lm_rewrite__1nhq0adm.jsonl', False, 7, 21, 'STOP', '\'<|tool_call>call:read_file{filepath:<|"|>pdfplumber/structure.py`}]<tool_call|><\'')
    ('kayak__pypika.1c9646f0.func_basic__7dnlb52y.jsonl', False, 19, 35, 'STOP', '\'<|tool_call>call: run_command{command: "grep -A 20 \\\'class SQLLiteQueryBuilder\\\' p\'')
    ('[task].jsonl', False, 10, 312, 'STOP', '\'<|tool_call>call edit_file{filepath:<|"|>polyfactory/utils/helpers.py`, new_stri\'')

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-84.log

:(bot-10fb01e8-7222-4490-b29a-be415729feb4B!
	sessionID
Lines 39-68 of the log file contain crucial insights. Specifically, the identifier `b003/e0015` seems linked to the observed behavior. This is an absolutely critical discovery.


[line removed by the dashboard scrubber]


The harness rejects direct tool calls following `<|channel>`, which explains the observed errors in `e0015` compared to the base. Examining the logs for malformed tool calls, a consistent error is evident: a space instead of a colon after `<|tool_call>call`, which appears in all six failing tasks in the base. This indicates a consistent structural issue in how tool calls are being formulated.


The `b003/aa` tasks consistently fail due to a comma replacing the colon in the `<|tool_call>call` structure. This same error manifests catastrophically in `b003/e0015`, resulting in 32 failing calls across 32 tasks, where a leading space appears instead of a colon after `<|tool_call>call`, preventing proper parsing of `edit_file`. This is a widespread structural problem. Checking other tasks to confirm this pattern.


The `e0015` tasks consistently fail due to a missing colon after `<|tool_call>call`, preventing correct parsing of `edit_file`. This error leads to wasted turns and timeouts in numerous tasks within `b003`. The structural issue impacts several tasks previously exhibiting performance degradation or step loss. It confirms a widespread structural error in how tool calls are being formulated and interpreted.


The analysis reveals a critical structural error: the consistent omission of the colon after `<|tool_call>call` across multiple tasks. This error prevents the proper parsing of tool calls, particularly `edit_file`, leading to dropped calls and timeouts. Further investigation suggests this error is not isolated to edited models, but also present, though less frequently, in the base model, affecting a significant number of tasks. The identifier `e0015` consistently exhibits the issue with all calls failing.


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2(bot-10fb01e8-7222-4490-b29a-be415729feb4:C
[line removed by the dashboard scrubber]

[line removed by the dashboard scrubber]
[line removed by the dashboard scrubber]
ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/tools/tok.py ids "<|channel>thought
" "<|tool_call>call:edit_file" "<|tool_call>call edit_file"'
Created At: 2026-11-13T14:35:12-05:00
Completed At: 2026-11-13T14:35:15-05:00
Command exited with code 1.

Command output:
[line removed by the dashboard scrubber]
bash: -c: line 1: `lslocks | grep gpu0 || echo GPU0_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/tools/tok.py ids <|channel>thought  <|tool_call>call:edit_file <|tool_call>call edit_file'
terminalJ.
[line removed by the dashboard scrubber]
ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/tools/tok.py ids "<|channel>thought
" "<|tool_call>call:edit_file" "<|tool_call>call edit_file"'
[line removed by the dashboard scrubber]
bash: -c: line 1: `lslocks | grep gpu0 || echo GPU0_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/tools/tok.py ids <|channel>thought  <|tool_call>call:edit_file <|tool_call>call edit_file'
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo "GPU0_FREE"; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/tools/tok.py ids "<|channel>thought
" "<|tool_call>call:edit_file" "<|tool_call>call edit_file"':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/89/output.txt

[line removed by the dashboard scrubber]
3C:\Users\Owner\wsp31_loop\work\gemini\check_toks.py
#!/usr/bin/env python3
import sys
sys.path.insert(0, "/home/keith/gemma-v2/wsp31/tools")
import wlib
tok = wlib.tok()
for s in ("<|channel>thought\n", "<|tool_call>call:edit_file{", "<|tool_call>call edit_file{", "<|tool_call>call:run_command{"):
[line removed by the dashboard scrubber]
    print(repr(s), "->", [(i, repr(tok.decode([i]))) for i in ids])
[Created At: 2026-11-13T14:35:25-05:00
Completed At: 2026-11-13T14:35:26-05:00
Created file.
=
;file:///C:/Users/Owner/wsp31_loop/work/gemini/check_toks.pyJC"A
;file:///C:/Users/Owner/wsp31_loop/work/gemini/check_toks.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
3C:/Users/Owner/wsp31_loop/work/gemini/check_toks.py
:
6sys.path.insert(0, "/home/keith/gemma-v2/wsp31/tools")
for s in ("<|channel>thought\n", "<|tool_call>call:edit_file{", "<|tool_call>call edit_file{", "<|tool_call>call:run_command{"):
5
[line removed by the dashboard scrubber]
G
C    print(repr(s), "->", [(i, repr(tok.decode([i]))) for i in ids])
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/91/output.txt

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scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_toks.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_toks.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || true; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_toks.py'
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Created At: 2026-11-13T14:35:34-05:00
Completed At: 2026-11-13T14:35:41-05:00
Command exited with code 0.

Command output:
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
'<|channel>thought\n' -> [(100, "'<|channel>'"), (45518, "'thought'"), (107, "'\\n'")]
'<|tool_call>call:edit_file{' -> [(48, "'<|tool_call>'"), (6639, "'call'"), (236787, "':'"), (8982, "'edit'"), (236779, "'_'"), (2164, "'file'"), (236782, "'{'")]
'<|tool_call>call edit_file{' -> [(48, "'<|tool_call>'"), (6639, "'call'"), (12287, "' edit'"), (236779, "'_'"), (2164, "'file'"), (236782, "'{'")]
'<|tool_call>call:run_command{' -> [(48, "'<|tool_call>'"), (6639, "'call'"), (236787, "':'"), (4503, "'run'"), (236779, "'_'"), (7674, "'command'"), (236782, "'{'")]
terminalJ.
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scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_toks.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_toks.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || true; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_toks.py'
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
'<|channel>thought\n' -> [(100, "'<|channel>'"), (45518, "'thought'"), (107, "'\\n'")]
'<|tool_call>call:edit_file{' -> [(48, "'<|tool_call>'"), (6639, "'call'"), (236787, "':'"), (8982, "'edit'"), (236779, "'_'"), (2164, "'file'"), (236782, "'{'")]
'<|tool_call>call edit_file{' -> [(48, "'<|tool_call>'"), (6639, "'call'"), (12287, "' edit'"), (236779, "'_'"), (2164, "'file'"), (236782, "'{'")]
'<|tool_call>call:run_command{' -> [(48, "'<|tool_call>'"), (6639, "'call'"), (236787, "':'"), (4503, "'run'"), (236779, "'_'"), (7674, "'command'"), (236782, "'{'")]
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_toks.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_toks.py ; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || true; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_toks.py':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/93/output.txt

:(bot-219c08dd-59a7-4ea6-8d17-317dc9183457B!
	sessionID
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The analysis reveals a critical error pattern: the `_call>call edit_file` sequence exhibits increased frequency in specific tasks, especially in `0015`, with complete failure in some base configurations. The proposed fix, Entry 1, focuses on a targeted, null-space-projected upgrade of the `0015` mechanism. It spans numerous matrices in semantic layers, aiming to address state transitions specifically. Initial assessment confirmed the matrix count and layer profile align with requirements, indicating a focused and potentially effective solution.


Focusing on targeted matrix edits within layers L20-L59 presents a constraint. To reach the minimum matrix count while avoiding layers L0-L19 requires careful planning. Considering the implications of touching `o_proj` and `down_proj` matrices from layers L10-L59 with a smooth ramp from L10-L19 is a possible path, but strict null-space projection of critical state transitions is essential. An alternative is a solution involving edits strictly in L20-L59 only.


Initial analysis suggests modifying writer projections (`o_proj`, `down_proj`) shows promise, confirmed by previous performance gains. Reader changes are untested. Considering a focused writer-focused edit across layers L10-L59, with a null-space-preserving projection (AlphaEdit/ROME), is a potentially better option. This should be verified through careful calculations focused on writer output for "close" vs. "cont" pairs.


[... 39 lines cut ...]
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I'm thinking through how to approach this.


2(bot-219c08dd-59a7-4ea6-8d17-317dc9183457:
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B1#R#tzCAO6lLBߋNne1 QL);efn~m"zG`Q_FQ`3I97D7pns*

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B1#R#tzCAO6lLBߋNne1 QL);efn~m"zG`Q_FQ`3I97D7pns*
7C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py
#!/usr/bin/env python3
import glob, json, os

R = "/home/keith/gemma-v2"
ARMS = [
    ("b001", "base"), ("b001", "aa"), ("b001", "zero"),
    ("b002", "base"), ("b002", "aa"),
    ("b003", "base"), ("b003", "aa"),
    ("b003", "e0015"),
]

for batch, arm in ARMS:
    bdir = f"{R}/results/wsp31/batches/{batch}/{arm}/rebench/shard0_gpu0"
    res = {json.loads(l)["instance_id"]: json.loads(l) for l in open(f"{bdir}/task_results.jsonl")}
    malf_eps = set()
    malf_calls = 0
    malf_solved = 0
[... 38 lines cut ...]
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O
K            tcs = (c.get("response_message") or {}).get("tool_calls") or []
if (101 in comp and not tcs) or (comp and comp[0] != 100) or (100 in comp and 101 not in comp and c.get("finish_reason") == "stop"):
4
0            if res.get(iid, {}).get("resolved"):
print(f"{batch}/{arm:6s}: malformed_calls={malf_calls:3d} across {len(malf_eps):2d} tasks (solved {malf_solved}/{len(malf_eps)})")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/95/output.txt

:(bot-e7f9679a-8709-4cea-83b1-dc05a05ec3f8B!
	sessionID
BWf3arSbFuKbo_UPwJeLKAb$a46664e5-b8d0-42ee-975e-31e2e7094bc0
:(bot-e7f9679a-8709-4cea-83b1-dc05a05ec3f8B!
	sessionID
<summary>
1. **Task Overview**
   - **Role & Goal**: Author `gemini` in the `wsp31` training-free weight-editing programme on Gemma 4 31B (`gemma-4-31b-it-qat-w4a16-ct`), **Turn 5**. Submit **ONE round of at most TWO queue entries** under `/home/keith/gemma-v2/wsp31/authors/gemini/queue/<slug>/` on host `wrx90` to maximize coding-agent solve rate over Champion Generation 0 (currently unedited model).
   - **Wall-Clock Deadline**: Turn started `2026-11-13T14:19:29-05:00` with a strict **90-minute wall-clock limit** (~`15:49 EST`). Finish Entry 1 completely (including `READY`) before starting Entry 2, keep `NOTES.md` current (under 600 words, rewritten not appended), clean `scratch/` dumps, and end the turn with a **five-line summary** of what was queued and why.
   - **Deliverables per Entry** (`/home/keith/gemma-v2/wsp31/authors/gemini/queue/<slug>/`, `<slug>` lowercase letters/digits/hyphens <= 40 chars):
     - `edit/` and `ctrl/` (PEFT LoRA adapters, `1 <= r <= 32`, `lora_alpha = 2*r`, bf16, passing `$PY $T/check_adapter.py`).
     - `build.sh` (deterministic byte-for-byte rebuild of `edit/` and `ctrl/` from `code/`).
     - `record.md` starting with `title: <one line, no | char, 10..140 chars>`, followed by `## Hypothesis`, `## Exact recipe` (must contain `base: champion generation 0` and `size: whole network <x>% over <n> matrices, largest matrix <y>%` from `train_size.py`, plus checker output and pre-test tables noting any tool marked unverified/uncalibrated in `TOOLS.md`), and `## Prediction (written before the run)` (must contain `predicted_gain_120: <low> to <high>`, expected behavioural movements, control behaviour, and falsification criteria).
     - `READY` (empty file, created last).
   - **Mandatory Size Rule**: At least **one entry per round must be training-sized**: `>= 0.3%` whole-network Frobenius norm (`net_rel >= 0.003`) over `>= 100` matrices. A third entry in the round is rejected.

2. **Progress**
   - **All Required Reference Docs Read on `wrx90`**:
     - `/home/keith/gemma-v2/wsp31/authors/BRIEF.md`
     - `/home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md` and `RESULTS.md`
[... 142 lines cut ...]
;file:///C:/Users/Owner/wsp31_loop/work/gemini/check_toks.py2
?file:///C:/Users/Owner/wsp31_loop/work/gemini/check_malf_all.py
4type.googleapis.com/exa.cortex_pb.TrajectoryFileDiff
w
?file:///C:/Users/Owner/wsp31_loop/work/gemini/check_malf_all.py2
"?file:///C:/Users/Owner/wsp31_loop/work/gemini/check_malf_all.py*w
?file:///C:/Users/Owner/wsp31_loop/work/gemini/check_malf_all.py2
You are author 'gemini' in the wsp31 weight-editing programme. This is turn 5. Your full instructions are in a brief on host wrx90. First run:  ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/BRIEF.md'  and follow it exactly, working as author 'gemini' (your directory is /home/keith/gemma-v2/wsp31/authors/gemini/). The results of your last round, and every other author's entries and results, are in /home/keith/gemma-v2/wsp31/authors/gemini/RESULTS.md on wrx90: read it before you decide anything. This turn submits ONE round of at most two queue entries; a third is rejected, and your next turn opens only when this round has been screened. You have 90 minutes of wall-clock time and are stopped at the limit, so finish each entry completely (READY file) before starting the next and keep NOTES.md current as you go. Work autonomously: nobody will answer questions during the turn.

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\check_malf_all.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py; ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo NO_GPU0_LOCK; head -n 2 /home/keith/gemma-v2/wsp31/tools/data/probe_calls_b001_full.jsonl; head -n 2 /home/keith/gemma-v2/wsp31/tools/data/probe_b001_full.jsonl; /home/keith/gemma-v2/venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py'","WaitMsBeforeAsync":10000,"toolSummary":"Check GPU0 lock, probe data schema, and malformed calls"}:
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py; ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo NO_GPU0_LOCK; head -n 2 /home/keith/gemma-v2/wsp31/tools/data/probe_calls_b001_full.jsonl; head -n 2 /home/keith/gemma-v2/wsp31/tools/data/probe_b001_full.jsonl; /home/keith/gemma-v2/venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py'
7Check GPU0 lock, probe data schema, and malformed calls
PThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/98/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:39:37-05:00
Completed At: 2026-11-13T14:39:48-05:00
Command exited with code 1.

Command output:
Fri Nov 13 02:39:47 PM EST 2026
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
{"trace": "/home/keith/gemma-v2/results/wsp31/batches/b001/base/rebench/shard0_gpu0/requests/Mimino666__langdetect.a1598f1a.func_basic__rku38xih.jsonl", "run": "/home/keith/gemma-v2/results/wsp31/batches/b001/base", "instance": "Mimino666__langdetect.a1598f1a.func_basic__rku38xih", "rollout": 0, "resolved": true, "call": 0, "calls_total": 35, "n": 3485, "ids": [2, 105, 9731, 107, 98, 107, 3048, 659, 496, 7647, 17856, 5368, 19042, 54564, 496, 20387, 4186, 528, 86072, 44484, 21233, 107, 11069, 11097, 12092, 563, 531, 6360, 496, 11893, 236764, 5989, 236772, 63055, 3738, 19126, 600, 16349, 1418, 11497, 5121, 236772, 1071, 236772, 4373, 532, 1786, 236772, 1071, 236772, 4373, 21055, 1594, 580, 506, 1171, 53531, 1845, 236761, 108, 1408, 43669, 12248, 833, 2761, 1877, 27429, 107, 236770, 236761, 5213, 17995, 236772, 236823, 12779, 184945, 833, 18326, 71597, 25373, 66515, 2301, 3707, 2802, 236761, 15428, 1845, 2165, 36240, 8347, 2165, 7926, 8347, 2165, 123099, 8347, 653, 2165, 13705, 12270, 21233, 7918, 236787, 2165, 25360, 236929, 20442, 604, 3078, 26387, 18833, 563, 5244, 10142, 528, 506, 9714, 2192, 2462, 1161, 2165, 105527, 753, 50073, 2617, 3917, 718, 22429, 2551, 34841, 573, 4592, 4453, 34369, 834, 611, 2752, 8321, 496, 5904, 2246, 580, 2165, 7674, 711, 1765, 21233, 107, 236778, 236761, 5213, 49388, 173620, 133087, 66515, 13677, 4710, 5125, 28250, 236764, 506, 53531, 36326, 5213, 24758, 975, 532, 223557, 784, 3731, 1018, 531, 2165, 29429, 236786, 8347, 2165, 2181, 236786, 8347, 2165, 17541, 236786, 8347, 2165, 2181, 236779, 22429, 2551, 8347, 2165, 179030, 2181, 236761, 2551, 8347, 2165, 746, 166035, 236761, 2551, 8347, 2165, 2551, 6201, 236761, 137794, 8347, 2165, 21449, 236761, 27390, 8347, 2165, 111734, 236761, 2818, 8347, 532, 2165, 15546, 236761, 2818, 21233, 7685, 912, 529, 822, 7562, 59931, 47335, 528, 1908, 236772, 2181, 3719, 3738, 5734, 236761, 107, 236800, 236761, 5213, 23450, 236750, 39779, 7992, 89504, 20442, 13705, 1138, 753, 236797, 783, 18833, 66515, 2165, 15037, 236779, 10517, 236929, 13479, 16039, 2225, 236750, 39779, 5734, 4888, 86072, 44484, 236929, 236888, 15428, 5264, 32029, 653, 23037, 5734, 4888, 86072, 44484, 236929, 2192, 1845, 168901, 28265, 4323, 2165, 6719, 236800, 753, 2986, 236789, 22965, 100464, 653, 4888, 86072, 11935, 236786, 500, 1045, 236761, 2551, 236929, 528, 
[... 42633 characters cut ...]

j{"EndLine":400,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_gemini_stats.py","StartLine":1}2
=C:\Users\Owner\wsp31_loop\work\gemini\capture_gemini_stats.py
Created At: 2026-11-13T14:39:45-05:00
Completed At: 2026-11-13T14:39:48-05:00
Showing lines 1-400 of 442
1: #!/usr/bin/env python3
2: """capture_gemini_stats.py: Single-pass exact per-call activation & writer capture on GPU 0.
3: Uses ONLY wsp31_screen_v1 data ($T/data/probe_calls_b001.jsonl and b001 request logs for longer late-preedit calls).
4: Deterministic task split: sha256(instance_id)[:8] % 4 == 0 -> check (14+ tasks), != 0 -> fit (44+ tasks).
5: """
6: import argparse, collections, glob, hashlib, json, os, sys, time
7: from collections import Counter
8: import torch
9: 
10: R = "/home/keith/gemma-v2"
11: T = f"{R}/wsp31/tools"
12: sys.path.insert(0, T)
13: import g31
14: 
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[... 381 lines cut ...]
397:                 "n_tools": it["n_tools"], "n_edits": it["n_edits"], "n_reads": it["n_reads"],
398:                 "lp_101": float(lp[i, CH_END]),
399:                 "lp_logged": float(lp[i, p["next"]]),
400:                 "lp_tools": {int(t): float(lp[i, t]) for t in TOOL_TOKS} if p["kind"] == "tool" else None,
L
Efile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_gemini_stats.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
=C:\Users\Owner\wsp31_loop\work\gemini\capture_gemini_stats.py

c{"EndLine":400,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build.py","StartLine":1}2
6C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build.py
Created At: 2026-11-13T14:39:45-05:00
Completed At: 2026-11-13T14:39:48-05:00
Showing lines 1-400 of 597
1: #!/usr/bin/env python3
2: """fit_and_build.py: Deterministic closed-form fitter and PEFT LoRA builder for author gemini.
3: Subcommands:
4:   fit   --raw scratch/raw_capture.pt --out code/data/gemini_directions.pt
5:   build --dirs code/data/gemini_directions.pt --family FAMILY --part edit|ctrl --out DIR [--net-rel X] [--gate-dose D] [--champion current]
6: 
7: Families:
[line removed by the dashboard scrubber]
9:   2. rumination_damp_r2 : Subtractive Rank-2 Deep-Rumination Attractor Damping (280 matrices: all 7 modules across layers 20..59, alpha < 0)
10:   3. late_commit_gate   : Leak-Free 3-Way Conjunctive GeGLU Gate at Late Pre-Edit <|tool_call>call: (22 layers 36..57, 66 MLP matrices, rank 1)
11:   4. dual_rescue_r5     : Joint Closed-Form Stack of exact_close_r4 + late_commit_gate (164 matrices across all 60 layers, rank <= 5)
12: """
13: import argparse, json, math, os, sys, zlib
14: import torch
15: 
[... 382 lines cut ...]
398:             "fire_neg_post_edit": round(mean_fire_pst, 4),
399:             "fire_neg_arg": round(mean_fire_arg, 4),
400:             "fire_neg_other": round(mean_fire_oth, 4),
E
>file:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build.py
2~
2type.googleapis.com/exa.cortex.core.tools.ReadFile
6C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build.py

c{"EndLine":400,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\pretest_hold2.py","StartLine":1}2
6C:\Users\Owner\wsp31_loop\work\gemini\pretest_hold2.py
g
eCreated At: 2026-11-13T14:39:45-05:00
Completed At: 2026-11-13T14:39:48-05:00
Showing lines 1-253 of 253
1: #!/usr/bin/env python3
2: """pretest_hold2.py: Unified single-hold GPU-0 pre-test runner (keeps ONE g31.G31 model in VRAM).
3: Strictly evaluates on HELD-OUT CHECK TASKS (sha256(instance_id)[:8] % 4 == 0, unseen during direction/gate fitting).
4: 
5: Runs ONE unified forward pass per adapter across:
6:   - s1_seqs: held-out check traces from probe_b001.jsonl (supplying step, turn, think, tool points)
7:   - s2_seqs: held-out exact per-call sequences across all 4 strata (supplying turn, think, tool, close, cont, arg points)
8: 
9: Produces for every adapter passed as NAME=DIR (saving JSON atomically after every arm):
10:   1. Official causal/plib summary & verdict on held-out decision points (all, turn, step, think, tool).
11:   2. Official closeprobe.table on exact per-call contexts (close vs cont across depth<200, 200..799, 800+).
12:   3. Exact Tool-Gate Specificity table across held-out strata:
13:      - pos_late_pre (tool point, n_edits==0, n_tools>=8)
14:      - neg_early_pre (tool point, n_edits==0, n_tools<=5)
[... 236 lines cut ...]
251: 
252: if __name__ == "__main__":
253:     main()
E
>file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_hold2.py
2|
2type.googleapis.com/exa.cortex.core.tools.ReadFile
6C:\Users\Owner\wsp31_loop\work\gemini\pretest_hold2.py

c{"EndLine":400,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\package_entry.py","StartLine":1}2
6C:\Users\Owner\wsp31_loop\work\gemini\package_entry.py
>
<Created At: 2026-11-13T14:39:45-05:00
Completed At: 2026-11-13T14:39:48-05:00
Showing lines 1-159 of 159
1: #!/usr/bin/env python3
2: """package_entry.py: Builds, rebuild-verifies byte-for-byte, runs check_adapter.py + train_size.py,
3: validates record.md against runner.py's exact rules & SENSITIVE regex, and (when --mark-ready is passed)
4: creates the READY marker.
5: """
6: import argparse, hashlib, json, os, re, shutil, stat, subprocess, sys
7: from pathlib import Path
8: 
9: R = Path("/home/keith/gemma-v2")
10: PY = str(R / "tii-venv" / "bin" / "python")
11: T = R / "wsp31" / "tools"
12: G = R / "wsp31" / "authors" / "gemini"
13: CODE = G / "code"
14: Q_DIR = G / "queue"
[... 142 lines cut ...]
157: 
158: if __name__ == "__main__":
159:     print("package_entry module syntax OK")
E
>file:///C:/Users/Owner/wsp31_loop/work/gemini/package_entry.py
2|
2type.googleapis.com/exa.cortex.core.tools.ReadFile
6C:\Users\Owner\wsp31_loop\work\gemini\package_entry.py

{"EndLine":600,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\steps\\98\\output.txt","StartLine":1}:
wC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\steps\98\output.txt
Created At: 2026-11-13T14:39:58-05:00
Completed At: 2026-11-13T14:40:06-05:00
Partial read (lines 1-12 of 12). Showing bytes 0-46080 of 380011 in this line range, truncated at the 46080-byte limit. To read the rest of this line range, call this tool again with the same StartLine and EndLine and ByteOffset=46080.
1: Created At: 2026-11-13T14:39:37-05:00
2: Completed At: 2026-11-13T14:39:48-05:00
3: Command exited with code 1.
4: 
5: Command output:
6: Fri Nov 13 02:39:47 PM EST 2026
7: flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
8: {"trace": "/home/keith/gemma-v2/results/wsp31/batches/b001/base/rebench/shard0_gpu0/requests/Mimino666__langdetect.a1598f1a.func_basic__rku38xih.jsonl", "run": "/home/keith/gemma-v2/results/wsp31/batches/b001/base", "instance": "Mimino666__langdetect.a1598f1a.func_basic__rku38xih", "rollout": 0, "resolved": true, "call": 0, "calls_total": 35, "n": 3485, "ids": [2, 105, 9731, 107, 98, 107, 3048, 659, 496, 7647, 17856, 5368, 19042, 54564, 496, 20387, 4186, 528, 86072, 44484, 21233, 107, 11069, 11097, 12092, 563, 531, 6360, 496, 11893, 236764, 5989, 236772, 63055, 3738, 19126, 600, 16349, 1418, 11497, 5121, 236772, 1071, 236772, 4373, 532, 1786, 236772, 1071, 236772, 4373, 21055, 1594, 580, 506, 1171, 53531, 1845, 236761, 108, 1408, 43669, 12248, 833, 2761, 1877, 27429, 107, 236770, 236761, 5213, 17995, 236772, 236823, 12779, 184945, 833, 18326, 71597, 25373, 66515, 2301, 3707, 2802, 236761, 15428, 1845, 2165, 36240, 8347, 2165, 7926, 8347, 2165, 123099, 8347, 653, 2165, 13705, 12270, 21233, 7918, 236787, 2165, 25360, 236929, 20442, 604, 3078, 26387, 18833, 563, 5244, 10142, 528, 506, 9714, 2192, 2462, 1161, 2165, 105527, 753, 50073, 2617, 3917, 718, 22429, 2551, 34841, 573, 4592, 4453, 34369, 834, 611, 2752, 8321, 496, 5904, 2246, 580, 2165, 7674, 711, 1765, 21233, 107, 236778, 236761, 5213, 49388, 173620, 133087, 66515, 13677, 4710, 5125, 28250, 236764, 506, 53531, 36326, 5213, 24758, 975, 532, 223557, 784, 3731, 1018, 531, 2165, 29429, 236786, 8347, 2165, 2181, 236786, 8347, 2165, 17541, 236786, 8347, 2165, 2181, 236779, 22429, 2551, 8347, 2165, 179030, 2181, 236761, 2551, 8347, 2165, 746, 166035, 236761, 2551, 8347, 2165, 2551, 6201, 236761, 137794, 8347, 2165, 21449, 236761, 27390, 8347, 2165, 111734, 236761, 2818, 8347, 532, 2165, 15546, 236761, 2818, 21233, 7685, 912, 529, 822, 7562, 59931, 47335, 528, 1908, 236772, 2181, 3719, 3738, 5734, 236761, 107, 236800, 236761, 5213, 23450, 236750, 39779, 7992, 89504, 20442, 13705, 1138, 753, 236797, 783, 18833, 66515, 2165, 15037, 236779, 10517, 236929, 13479, 16039, 2225, 236750, 39779, 5734, 4888, 86072, 44484, 236929, 236888, 15428, 5264, 32029, 653, 23037, 5734, 4888, 86072, 44484, 236929, 2192, 1845, 168901, 28265, 4323, 2165, 6719, 236800, 753, 2986, 236789, 22965, 100464, 653, 4888, 86072, 11935, 236786, 500, 1045, 236761, 2551, 236929, 528, 496, 3161, 2165, 4503, 236779, 7674, 21233, 107, 236812, 236761, 5213, 165350, 1733, 4094, 567, 18359, 66515, 2165, 4503, 236779, 7674, 236929, 22523, 1090, 70949, 1308, 506, 1171, 236743, 236810, 236764, 236771, 236771, 236771, 7579, 699, 506, 43337, 236761, 31246, 1845, 118877, 36574, 607, 2822, 15819, 26062, 236787, 107, 139, 236929, 111734, 2479, 236786, 1071, 236786, 2181, 236779, 2164, 236761, 2551, 753, 236767, 3759, 753, 236809, 2617, 33395, 236784, 15721, 2617, 1904, 236772, 5653, 236929, 107, 139, 2859, 496, 1594, 2129, 563, 2455, 236764, 12315, 3938, 531, 86072, 11935, 236786, 111734, 236761, 1587, 236929, 532, 19703, 2165, 14170, 753, 236749, 236743, 236828, 236771, 965, 11935, 236786, 111734, 236761, 1587, 236929, 834, 8800, 15819, 26062, 657, 506, 5944, 659, 2752, 3
[... 42986 characters cut ...]

e{"EndLine":600,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build.py","StartLine":401}2
6C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build.py
Q
OCreated At: 2026-11-13T14:39:59-05:00
Completed At: 2026-11-13T14:40:06-05:00
Showing lines 401-597 of 597
401:         },
402:         "f3_per_layer": f3_diag,
403:     }
404:     os.makedirs(os.path.dirname(a.out), exist_ok=True)
405:     torch.save({
406:         "f1_dirs": f1_dirs,
407:         "f2_dirs": f2_dirs,
408:         "f3_neurons": f3_neurons,
409:         "summary": summary,
410:     }, a.out + ".tmp")
411:     os.replace(a.out + ".tmp", a.out)
412:     with open(a.out + ".summary.json", "w") as jf:
413:         json.dump(summary, jf, indent=2)
414:     print(f"Saved fitted directions to {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB)")
[... 180 lines cut ...]
595: 
596: if __name__ == "__main__":
597:     main()
F
>file:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build.py
2~
2type.googleapis.com/exa.cortex.core.tools.ReadFile
6C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build.py

l{"EndLine":450,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_gemini_stats.py","StartLine":395}2
=C:\Users\Owner\wsp31_loop\work\gemini\capture_gemini_stats.py
Created At: 2026-11-13T14:40:05-05:00
Completed At: 2026-11-13T14:40:06-05:00
Showing lines 395-442 of 442
395:                 "pos": p["pos"], "kind": p["kind"], "next": p["next"],
396:                 "depth": p.get("depth", 0), "tok": p["tok"],
397:                 "n_tools": it["n_tools"], "n_edits": it["n_edits"], "n_reads": it["n_reads"],
398:                 "lp_101": float(lp[i, CH_END]),
399:                 "lp_logged": float(lp[i, p["next"]]),
400:                 "lp_tools": {int(t): float(lp[i, t]) for t in TOOL_TOKS} if p["kind"] == "tool" else None,
401:                 "top1": int(lp[i].argmax()),
402:             })
403: 
404:         if (idx + 1) % 15 == 0 or idx == 0:
[line removed by the dashboard scrubber]
406:         del res, caps, lp
407: 
408:     # Convert defaultdicts to plain dicts of fp32 task means
409:     task_means = {}
[... 29 lines cut ...]
439: 
440: 
441: if __name__ == "__main__":
442:     main()
M
Efile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_gemini_stats.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
=C:\Users\Owner\wsp31_loop\work\gemini\capture_gemini_stats.py

[line removed by the dashboard scrubber]
-1993e737-e49e-4f87-9e50-f234f7917537/task-107
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-107.log
<truncated 372 lines>
"
    e = ed.save(os.path.join(a.out, "edit"), max_rank=32, note=note)
    c = ed.control("random", seed=a.seed).save(os.path.join(a.out, "ctrl"), max_rank=32, note="control of " + note)
    torch.save(dirs, os.path.join(a.out, "directions.pt"))
[line removed by the dashboard scrubber]
                                                                   preserve_solve=len(pt), preserve_heldout=len(ph)),
[line removed by the dashboard scrubber]
    print(f"edit: {a.out}/edit ({len(layers)} matrices, net_rel {e.get('net_rel', float('nan')):.5%}); control: {a.out}/ctrl "
          f"(net_rel {c.get('net_rel', float('nan')):.5%}). One-layer linear predictions above; measure the real move with "
[line removed by the dashboard scrubber]


if __name__ == "__main__":
    main()
=== python path check ===
"
[... 547 lines cut ...]
b002/aa    : malformed_calls=  8 across  4 tasks (solved 0/4)
b003/base  : malformed_calls= 10 across  7 tasks (solved 0/7)
b003/aa    : malformed_calls= 13 across  6 tasks (solved 0/6)
b003/e0015 : malformed_calls=130 across 46 tasks (solved 0/46)
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
[line removed by the dashboard scrubber]
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/107/output.txt

{"EndLine":420,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-107.log","StartLine":1}:
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-107.log
Created At: 2026-11-13T14:40:29-05:00
Completed At: 2026-11-13T14:40:29-05:00
Showing lines 1-394 of 394
1: #!/usr/bin/env python
[line removed by the dashboard scrubber]
3: [--preserve-kinds turn,tool,think] --direction FILE.pt|tok:ID|diff:KINDA-KINDB [--alpha 0.5] [--lam 1.0]
[line removed by the dashboard scrubber]
[line removed by the dashboard scrubber]
6: result need GPU 0.
[line removed by the dashboard scrubber]
[line removed by the dashboard scrubber]
9: layers) x its own norm along your direction d, while at the PRESERVE positions the write does not move:
[line removed by the dashboard scrubber]
11: with k, p = the captured neuron activations (`mlp_act`, the exact input of down_proj) and mu' = mu x mean |k|^2.
[line removed by the dashboard scrubber]
13: weighted preserve activations (ridge regression in its dual form; with a preserve set this is the least-squares
14: solve of ROME / MEMIT with the covariance taken from your preserve positions). Its rank is at most the number of
[line removed by the dashboard scrubber]
[... 374 lines cut ...]
390: b002/base  : malformed_calls= 11 across  6 tasks (solved 0/6)
391: b002/aa    : malformed_calls=  8 across  4 tasks (solved 0/4)
392: b003/base  : malformed_calls= 10 across  7 tasks (solved 0/7)
393: b003/aa    : malformed_calls= 13 across  6 tasks (solved 0/6)
394: b003/e0015 : malformed_calls=130 across 46 tasks (solved 0/46)
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-107.log
2type.googleapis.com/exa.cortex.core.tools.ReadFile
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-107.log

R[Message] timestamp=2026-11-13T19:40:19Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-107 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-107" finished with result:
The tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/107/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 0.

Command output:
#!/usr/bin/env python
[line removed by the dashboard scrubber]
[--preserve-kinds turn,tool,think] --direction FILE.pt|tok:ID|diff:KINDA-KINDB [--alpha 0.5] [--lam 1.0]
[line removed by the dashboard scrubber]
[line removed by the dashboard scrubber]
result need GPU 0.
[line removed by the dashboard scrubber]
[line removed by the dashboard scrubber]
layers) x its own norm along your direction d, while at the PRESERVE positions the write does not move:
[line removed by the dashboard scrubber]
with k, p = the captured neuron activations (`mlp_act`, the exact input of down_proj) and mu' = mu x mean |k|^2.
[line removed by the dashboard scrubber]
weighted preserve activations (ridge regression in its dual form; with a preserve set this is the least-squares
[... 681 lines cut ...]
b001/zero  : malformed_calls=  4 across  4 tasks (solved 0/4)
b002/base  : malformed_calls= 11 across  6 tasks (solved 0/6)
b002/aa    : malformed_calls=  8 across  4 tasks (solved 0/4)
b003/base  : malformed_calls= 10 across  7 tasks (solved 0/7)
b003/aa    : malformed_calls= 13 across  6 tasks (solved 0/6)
b003/e0015 : malformed_calls=130 across 46 tasks (solved 0/46)

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-107.log

d{"EndLine":100,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\check_malf_all.py","StartLine":1}:
7C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py
Created At: 2026-11-13T14:40:44-05:00
Completed At: 2026-11-13T14:40:44-05:00
Showing lines 1-32 of 32
1: #!/usr/bin/env python3
2: import glob, json, os
3: 
4: R = "/home/keith/gemma-v2"
5: ARMS = [
6:     ("b001", "base"), ("b001", "aa"), ("b001", "zero"),
7:     ("b002", "base"), ("b002", "aa"),
8:     ("b003", "base"), ("b003", "aa"),
9:     ("b003", "e0015"),
10: ]
11: 
12: for batch, arm in ARMS:
13:     bdir = f"{R}/results/wsp31/batches/{batch}/{arm}/rebench/shard0_gpu0"
14:     res = {json.loads(l)["instance_id"]: json.loads(l) for l in open(f"{bdir}/task_results.jsonl")}
15:     malf_eps = set()
[... 14 lines cut ...]
30:             if res.get(iid, {}).get("resolved"):
31:                 malf_solved += 1
32:     print(f"{batch}/{arm:6s}: malformed_calls={malf_calls:3d} across {len(malf_eps):2d} tasks (solved {malf_solved}/{len(malf_eps)})")
E
?file:///C:/Users/Owner/wsp31_loop/work/gemini/check_malf_all.py
2{
2type.googleapis.com/exa.cortex.core.tools.ReadFile
7C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\check_malf_all.py","Replacement":"        iid = os.path.basename(rf)[:-6]","Target":"        iid = os.path.basename(rf).split(\"__r\")[0]"}:
2        iid = os.path.basename(rf).split("__r")[0]
?
7C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py
6
'        iid = os.path.basename(rf)[:-6]
Created At: 2026-11-13T14:40:57-05:00
Completed At: 2026-11-13T14:40:59-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py starting at line 19 (+1/-1 lines).
A
?file:///C:/Users/Owner/wsp31_loop/work/gemini/check_malf_all.pyJI"G
?file:///C:/Users/Owner/wsp31_loop/work/gemini/check_malf_all.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
7C:/Users/Owner/wsp31_loop/work/gemini/check_malf_all.py
;
7    ("b001", "base"), ("b001", "aa"), ("b001", "zero"),
)
%    ("b002", "base"), ("b002", "aa"),
)
%    ("b003", "base"), ("b003", "aa"),
[... 11 lines cut ...]
[line removed by the dashboard scrubber]
O
K            tcs = (c.get("response_message") or {}).get("tool_calls") or []
if (101 in comp and not tcs) or (comp and comp[0] != 100) or (100 in comp and 101 not in comp and c.get("finish_reason") == "stop"):
4
0            if res.get(iid, {}).get("resolved"):
print(f"{batch}/{arm:6s}: malformed_calls={malf_calls:3d} across {len(malf_eps):2d} tasks (solved {malf_solved}/{len(malf_eps)})")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/114/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\check_malf_all.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py'","WaitMsBeforeAsync":10000,"toolSummary":"Check GPU0 lock and exact malformed call solve rate"}2
-1993e737-e49e-4f87-9e50-f234f7917537/task-115
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-115.log
[flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
"
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py':3Check GPU0 lock and exact malformed call solve rateB
3Check GPU0 lock and exact malformed call solve rate
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py'
Command exited with code 0.

Command output:
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
b001/base  : malformed_calls= 20 across  8 tasks (solved 5/8)
b001/aa    : malformed_calls=  7 across  6 tasks (solved 2/6)
b001/zero  : malformed_calls=  4 across  4 tasks (solved 1/4)
b002/base  : malformed_calls= 11 across  6 tasks (solved 3/6)
b002/aa    : malformed_calls=  8 across  4 tasks (solved 3/4)
b003/base  : malformed_calls= 10 across  7 tasks (solved 4/7)
b003/aa    : malformed_calls= 13 across  6 tasks (solved 1/6)
b003/e0015 : malformed_calls=130 across 46 tasks (solved 25/46)
[... 8 lines cut ...]
b002/aa    : malformed_calls=  8 across  4 tasks (solved 3/4)
b003/base  : malformed_calls= 10 across  7 tasks (solved 4/7)
b003/aa    : malformed_calls= 13 across  6 tasks (solved 1/6)
b003/e0015 : malformed_calls=130 across 46 tasks (solved 25/46)
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/115/output.txt

:(bot-cf5a34b5-f131-4d36-824e-cb45b6176037B!
	sessionID
!The filename parsing logic in `capture_gemini_stats.py` appears flawed; it extracts the instance ID incorrectly. This could lead to incorrect data association. This likely explains some of the discrepancies.


The file naming convention in `requests/` includes instance IDs, sometimes with additional suffixes that must be stripped. Using a precise string slicing method ensures correct instance ID extraction, matching data across different files. The code will be updated to reflect this corrected ID parsing.

[line removed by the dashboard scrubber]


The previous entry's equation uses a flawed approach to orthogonalization and SVD direction selection. Specifically, the method of applying $dW$ across layers is inefficient and causes lexical layer waste with syntax damage, as evidenced by causal localization measurements. The orthogonalization only against a single vector and using the top-4 SVD directions across tasks leads to poor performance. Further, editing lower layers in `0015` wasted resources and corrupted representations.


The flawed orthogonalization method in `0015` significantly impacted the rank-4 writer subspace's overlap with writer outputs across various positions. This overlap resulted in numerous malformed calls in the specified tasks, including failures to correctly generate `<|channel>`, `<|tool_call>`, and tool call syntax. In essence, the single-vector orthogonalization and top-4 SVD direction selection introduced representational corruption and resource wastage, as evidenced by causal localization measurements.


The previous entry utilized an outdated fit sample size and an inefficient orthogonalization approach; the new entry incorporates a significantly larger dataset with 348 episodes, offering improved training. The updated design includes 100 writer matrices across 50 layers, specifically targeting mid-layers with a depth-tapered schedule to avoid lexical layer corruption. Protocol and action nullspace projection ensures controlled integration.


[line removed by the dashboard scrubber]
[... 8 lines cut ...]
The current entry's status is `queued_s2`, which may indicate promotion soon. `BRIEF.md` offers guidance on this scenario, outlining steps for stacking edits onto the current champion, which is generation 0. Re-examining the `build.sh` script to verify generation rebasing behavior is unnecessary since `BRIEF.md` clearly explains the protocol.


Considering two entries are in development, one aims to directly address malformed calls from the prior entry `0015` if it fails to clear Stage-2 confirmation. This new entry, `nullspace-close-r4-midlate`, is built on Gen 0 and resolves `0015`'s identified issues. The second entry requires an entirely orthogonal approach that can be stacked on either Gen 0 or Gen 1, ensuring flexibility in the promotion scenario.


2(bot-cf5a34b5-f131-4d36-824e-cb45b6176037:]
{"EndLine":100,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-115.log","StartLine":1}:[

{"EndLine":100,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-115.log","StartLine":1}:[
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-115.log
Created At: 2026-11-13T14:42:08-05:00
Completed At: 2026-11-13T14:42:08-05:00
Showing lines 1-9 of 9
1: flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
2: b001/base  : malformed_calls= 20 across  8 tasks (solved 5/8)
3: b001/aa    : malformed_calls=  7 across  6 tasks (solved 2/6)
4: b001/zero  : malformed_calls=  4 across  4 tasks (solved 1/4)
5: b002/base  : malformed_calls= 11 across  6 tasks (solved 3/6)
6: b002/aa    : malformed_calls=  8 across  4 tasks (solved 3/4)
7: b003/base  : malformed_calls= 10 across  7 tasks (solved 4/7)
8: b003/aa    : malformed_calls= 13 across  6 tasks (solved 1/6)
9: b003/e0015 : malformed_calls=130 across 46 tasks (solved 25/46)
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-115.log
2type.googleapis.com/exa.cortex.core.tools.ReadFile
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-115.log

[Message] timestamp=2026-11-13T19:41:13Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-115 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-115" finished with result:
Command exited with code 0.

Command output:
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
b001/base  : malformed_calls= 20 across  8 tasks (solved 5/8)
b001/aa    : malformed_calls=  7 across  6 tasks (solved 2/6)
b001/zero  : malformed_calls=  4 across  4 tasks (solved 1/4)
b002/base  : malformed_calls= 11 across  6 tasks (solved 3/6)
b002/aa    : malformed_calls=  8 across  4 tasks (solved 3/4)
b003/base  : malformed_calls= 10 across  7 tasks (solved 4/7)
b003/aa    : malformed_calls= 13 across  6 tasks (solved 1/6)
b003/e0015 : malformed_calls=130 across 46 tasks (solved 25/46)

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-115.log
<Check GPU0 lock and exact malformed call solve rate finishedR
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\check_malf_all.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_malf_all.py'
flock           822414 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
b001/base  : malformed_calls= 20 across  8 tasks (solved 5/8)
b001/aa    : malformed_calls=  7 across  6 tasks (solved 2/6)
[... 17 lines cut ...]
b001/zero  : malformed_calls=  4 across  4 tasks (solved 1/4)
b002/base  : malformed_calls= 11 across  6 tasks (solved 3/6)
b002/aa    : malformed_calls=  8 across  4 tasks (solved 3/4)
b003/base  : malformed_calls= 10 across  7 tasks (solved 4/7)
b003/aa    : malformed_calls= 13 across  6 tasks (solved 1/6)
b003/e0015 : malformed_calls=130 across 46 tasks (solved 25/46)

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-115.log

:(bot-a7b6ae7a-a016-4f97-b40a-aaee78b97a26B!
	sessionID
+Initial malformed call counts were low after fixing the suffix bug, but a specific configuration (`b003/e0015`) shows a significant increase in malformed calls. The issue's behavior changed dramatically in this configuration, indicating a potential interaction between the change and that particular setting. This requires closer inspection of the config to isolate the trigger.


The configuration `b003/e0015` shows increased malformed calls, despite better performance in tasks due to a potentially inefficient projection and lexical handling. This suggests an opportunity for orthogonal improvement by targeting the bottleneck in Generation 0 and Generation 1 models. Designing a second entry requires a mechanism completely orthogonal to `0015`'s to test a distinct causal path with a training-sized edit.


The configuration `b003/e0015` consistently exhibits a failure pattern, marked by repeated `read_file` calls within an exploration loop before action commits. This inefficiency is evident in both unique loss events and empty-patch failures, which lack `edit_file` calls. Successful rollouts across discordant tasks demonstrate that reducing `read_file` calls correlates with better performance.


The failure in `0017` stems from an incorrect calculation, leading to an inverted write direction because of a negative value from the `gelu_tanh` function. This was confirmed by examining the activation behavior. Replacing the erroneous calculation with `up_row = gate_row` ensures neuron activation is always positive, resolving the inversion issue.


The analysis reveals a sign inversion problem corrected by setting `up_row = s * gate_row` with $s > 0$. This ensures a non-negative output for all inputs, eliminating the sign inversion issue across the entire real number line. This solves the problem and has no sign inversion issues.


The ratio of values between `pos_early_pre` and `pos_late_pre` is significantly different from initial expectations, with a leak percentage of only 0.3% and a consistent positive sign, mathematically validating the calculations. The matrix count is being checked to ensure the utilization of a minimum of 100 matrices and at least 0.32% whole-network norm. The Gemma 4 31B architecture contains 108 MLP matrices across 36 layers, satisfying the matrix count criteria for nonnegative GeGLU neurons. Further analysis considers the combination of Nonnegative GeGLU Gates and Subtractive Deep-Rumination Reader/Writer Damping.


[... 15 lines cut ...]
The primary goal is to address the remaining deep-rumination tasks and the `<|tool_call>call edit_file` failures observed in Configuration `0015` if it progresses to the Champion Generation 1 stage. Entry 2 provides an orthogonal solution:  rank-2 `P_rum` damping to counteract deep rumination, targeting persistent states without overlapping with `0015`'s `close` subspace. Entry 2's `late_pre_commit` neuron is designed to address the `read_file` loops and missing edit file calls.


Analyzing two distinct entry points, Entry 1 targets malformed call reduction via protocol-nullspace projection, exhibiting significant performance gains in existing tasks. Entry 2 proposes an orthogonal solution addressing deep rumination with damping, a commit gate, and a syntax guard. Both are non-overlapping with each other and are designed to avoid any potential performance degradation.


2(bot-a7b6ae7a-a016-4f97-b40a-aaee78b97a26:~
{"CommandLine":"ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE; ps -p 822414 -o pid,etime,cmd 2\u003e/dev/null || echo PID_822414_DONE'","WaitMsBeforeAsync":5000,"toolSummary":"Check if GPU0 lock released"}:|

{"CommandLine":"ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE; ps -p 822414 -o pid,etime,cmd 2\u003e/dev/null || echo PID_822414_DONE'","WaitMsBeforeAsync":5000,"toolSummary":"Check if GPU0 lock released"}:|
ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE; ps -p 822414 -o pid,etime,cmd 2>/dev/null || echo PID_822414_DONE'
Created At: 2026-11-13T14:43:20-05:00
Completed At: 2026-11-13T14:43:23-05:00
Command exited with code 0.

Command output:
Fri Nov 13 02:43:23 PM EST 2026
flock           1420845 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
PID_822414_DONE
ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE; ps -p 822414 -o pid,etime,cmd 2>/dev/null || echo PID_822414_DONE'
Fri Nov 13 02:43:23 PM EST 2026
flock           1420845 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
PID_822414_DONE
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE; ps -p 822414 -o pid,etime,cmd 2>/dev/null || echo PID_822414_DONE':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/120/output.txt

:(bot-cdba3cae-a207-4f9e-bdb0-d78eee3f8668B!
	sessionID
The `readout_job.sh` script completed successfully; another process is now holding the GPU lock. This confirms the blocking queue mechanism is operating correctly, indicating the lock acquisition is behaving as expected. The next step is to examine the output of the completed script for any error indicators.


The process with PID `1420845` is holding the lock; determining the wait time by checking the process information. The need for a separate command to check the process is unnecessary until `capture_t5_stats.py` is written. Focusing on designing `capture_t5_stats.py` precisely, planning a dry run on the CPU with the `wrx90` machine to test functionality quickly.

Planning to capture specific data points from `/home/keith/gemma-v2/wsp31/tools/data/probe_calls_b001_full.jsonl` within `capture_t5_stats.py`. This includes capturing per-call records from stage-1 tasks, ensuring a single GPU-0 pass for optimal efficiency.


Focusing on parsing and enriching specific JSONL files located in the results directory with call characteristics. Categorizing calls into `late_pre`, `edit_tool`, and `colon_drop` based on content. Implementing a strict task-level split using a hash-based fold to segregate tasks into "check" (unseen) and "fit" sets. This ensures zero data leakage between training and evaluation and the lists of task IDs are stored for reporting.


[line removed by the dashboard scrubber]


[line removed by the dashboard scrubber]


The 8-point call anatomy structure appears consistent: `turn`, `ch_open`, `cont`, `close`, `think`, `call_tok`, `tool`, and `arg` are captured. Records in the JSONL file should contain `ids` and `points`, including `turn`, `close`, `think`, `tool`, and `cont`. Verification against the output confirms this structure.


[line removed by the dashboard scrubber]


Analyzing memory requirements for capturing model statistics, focusing on fp16 and fp32 data. Estimated size for `pt_mlp_in_g` at approximately 870MB for gate layers, and around 170MB for `tool_mlp_raw_g`. This analysis provides a more realistic understanding of memory needs and enables more precise decisions. The analysis is considering both the model sizes and the computational needs of various approaches to the model.


2(bot-cdba3cae-a207-4f9e-bdb0-d78eee3f8668:
[line removed by the dashboard scrubber]

[line removed by the dashboard scrubber]
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py
#!/usr/bin/env python3
"""capture_t5_stats.py: Turn 5 single-pass exact per-call activation & writer capture on GPU 0.
Strictly uses wsp31_screen_v1 (stage-1) data ONLY:
  - $T/data/probe_calls_b001_full.jsonl (2,781 exact calls across 118 stage-1 tasks)
  - Supplemental long/late-preedit calls from results/wsp31/batches/b001/{base,aa,zero} verified in stage1_ids.txt.
Deterministic task split (zero outcome labels used):
  int(sha256(instance_id)[:8], 16) % 4 == 0 -> held-out check tasks (~29 tasks)
  int(sha256(instance_id)[:8], 16) % 4 != 0 -> fit tasks (~89 tasks)
"""
import argparse, collections, glob, hashlib, json, os, sys, time
from collections import Counter
import torch

R = "/home/keith/gemma-v2"
T = f"{R}/wsp31/tools"
sys.path.insert(0, T)
import g31

[... 1004 lines cut ...]
c        "ctok_mlp_raw_g": torch.stack(ctok_mlp_raw_g, dim=0) if ctok_mlp_raw_g else torch.empty(0),
+
'    torch.save(out_obj, a.out + ".tmp")
)
%    os.replace(a.out + ".tmp", a.out)
p
l    print(f"DONE: saved {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB) in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/122/output.txt

[line removed by the dashboard scrubber]
6C:\Users\Owner\wsp31_loop\work\gemini\check_sp_toks.py
#!/usr/bin/env python3
import sys
sys.path.insert(0, "/home/keith/gemma-v2/wsp31/tools")
import wlib
tok = wlib.tok()
for s in [":", " edit", " run", " read", " write", " submit", " get", "edit", "run", "read", "thought", "call"]:
[line removed by the dashboard scrubber]
    print(f"{s!r:10s} -> {ids}")
[Created At: 2026-11-13T14:45:49-05:00
Completed At: 2026-11-13T14:45:50-05:00
Created file.
@
>file:///C:/Users/Owner/wsp31_loop/work/gemini/check_sp_toks.pyJF"D
>file:///C:/Users/Owner/wsp31_loop/work/gemini/check_sp_toks.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
6C:/Users/Owner/wsp31_loop/work/gemini/check_sp_toks.py
:
6sys.path.insert(0, "/home/keith/gemma-v2/wsp31/tools")
t
pfor s in [":", " edit", " run", " read", " write", " submit", " get", "edit", "run", "read", "thought", "call"]:
5
[line removed by the dashboard scrubber]
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/124/output.txt

[line removed by the dashboard scrubber]
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py C:\Users\Owner\wsp31_loop\work\gemini\check_sp_toks.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_IS_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_sp_toks.py; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --dry'
[line removed by the dashboard scrubber]
Created At: 2026-11-13T14:45:49-05:00
Completed At: 2026-11-13T14:46:05-05:00
Command exited with code 1.

Command output:
flock           1420845 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
':'        -> [236787]
' edit'    -> [12287]
' run'     -> [1845]
' read'    -> [1676]
' write'   -> [4903]
' submit'  -> [13103]
' get'     -> [974]
'edit'     -> [8982]
'run'      -> [4503]
'read'     -> [1399]
'thought'  -> [45518]
[... 37 lines cut ...]
  File "/home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py", line 45, in load_stage1_ids
    return {l.strip() for l in open(p) if l.strip()}
                               ~~~~^^^
FileNotFoundError: [Errno 2] No such file or directory: '/home/keith/gemma-v2/wsp31/tools/data/stage1_ids.txt'
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py C:\Users\Owner\wsp31_loop\work\gemini\check_sp_toks.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_IS_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/check_sp_toks.py; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --dry':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/125/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'ls -la /home/keith/gemma-v2/wsp31/tools/data/'","WaitMsBeforeAsync":5000,"toolSummary":"List wsp31 tools/data directory"}:
Jssh -o BatchMode=yes wrx90 'ls -la /home/keith/gemma-v2/wsp31/tools/data/'
Created At: 2026-11-13T14:46:25-05:00
Completed At: 2026-11-13T14:46:26-05:00
Command exited with code 0.

Command output:
total 1120576
drwxrwxr-x  8 keith keith      4096 Nov 13 14:42 .
drwxrwxr-x 10 keith keith      4096 Nov 13 14:31 ..
-rw-rw-r--  1 keith keith      3226 Nov 13 14:31 armstats_b002_b003.json
drwxrwxr-x  2 keith keith      4096 Nov 13 14:45 cache
-rw-rw-r--  1 keith keith   2583949 Nov 12 21:03 capture_test.pt
drwxrwxr-x  3 keith keith      4096 Nov 12 21:45 champ
-rw-rw-r--  1 keith keith      2721 Nov 12 22:42 champ_fastprobe.json
-rw-rw-r--  1 keith keith      1222 Nov 12 23:25 closeprobe_base_s1.json
-rw-rw-r--  1 keith keith      2527 Nov 12 23:28 closeprobe_e2_s1.json
-rw-rw-r--  1 keith keith      2521 Nov 13 01:23 closeprobe_mk_a_ctrl.json
-rw-rw-r--  1 keith keith      2503 Nov 13 01:20 closeprobe_mk_a_edit.json
-rw-rw-r--  1 keith keith       346 Nov 12 21:09 consist_L50.json
[... 93 lines cut ...]
-rw-rw-r--  1 keith keith       132 Nov 12 19:28 verify_dequant_ref.json
-rw-rw-r--  1 keith keith     42357 Nov 12 23:32 vgen_forced.json
-rw-rw-r--  1 keith keith    111059 Nov 12 23:31 vgen_turn.json
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2Jssh -o BatchMode=yes wrx90 'ls -la /home/keith/gemma-v2/wsp31/tools/data/':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/127/output.txt

[line removed by the dashboard scrubber]
[line removed by the dashboard scrubber]
SP_TOKS    = [12287, 1845, 1676, 4903, 13103, 974]  # ' edit', ' run', ' read', ' write', ' submit', ' get'
TOOL_TOKS  = [TOK_RUN, TOK_READ, TOK_EDIT, TOK_WRIT, TOK_SUB, TOK_GET]

GATE_LAYERS = list(range(24, 60))  # 36 layers L24..59 (36 * 3 = 108 MLP matrices, 36 * 7 = 252 total matrices)


def fold_of(iid: str) -> int:
    return int(hashlib.sha256(iid.encode()).hexdigest()[:8], 16) % 4


def load_stage1_ids() -> set:
    p = f"{R}/results/wsp31/batches/b001/base/rebench/shard0_gpu0/task_results.jsonl"
    return {json.loads(l)["instance_id"] for l in open(p) if l.strip()}
[line removed by the dashboard scrubber]
TOOL_TOKS  = [TOK_RUN, TOK_READ, TOK_EDIT, TOK_WRIT, TOK_SUB, TOK_GET]

GATE_LAYERS = list(range(24, 60))  # 36 layers L24..59 (36 * 3 = 108 MLP matrices, 36 * 7 = 252 total matrices)

[... 528 lines cut ...]
c        "ctok_mlp_raw_g": torch.stack(ctok_mlp_raw_g, dim=0) if ctok_mlp_raw_g else torch.empty(0),
+
'    torch.save(out_obj, a.out + ".tmp")
)
%    os.replace(a.out + ".tmp", a.out)
p
l    print(f"DONE: saved {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB) in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/129/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_IS_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --dry; echo \"=== INTERP REPORT TAIL ===\"; tail -n 120 /home/keith/gemma-v2/wsp31/interp/REPORT.md'","WaitMsBeforeAsync":10000,"toolSummary":"Dry-run capture_t5_stats and read fresh interp REPORT.md"}2
8Dry-run capture_t5_stats and read fresh interp REPORT.md
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_IS_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --dry; echo "=== INTERP REPORT TAIL ==="; tail -n 120 /home/keith/gemma-v2/wsp31/interp/REPORT.md'
KCreated At: 2026-11-13T14:46:49-05:00
Completed At: 2026-11-13T14:47:00-05:00
Command exited with code 0.

Command output:
flock           1420845 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
Selected 216 calls: splits={'check': 51, 'fit': 165}, unique_tasks={fit: 56, check: 18}
  strata={('early_pre', 'check'): 12, ('early_pre', 'fit'): 40, ('edit_tool', 'check'): 13, ('edit_tool', 'fit'): 45, ('late_pre', 'check'): 16, ('late_pre', 'fit'): 44, ('post_edit', 'check'): 10, ('post_edit', 'fit'): 36}
  expanded point counts={'turn': 216, 'ch_open': 216, 'cont': 1968, 'close': 216, 'think': 216, 'call_tok': 216, 'tool': 216, 'arg': 421} (total 3685)
=== INTERP REPORT TAIL ===
- **B2 (permuted residual coordinates): met by both readers** (Holm p 6.0e-5), but the same one-line rule gets
  80%, and the readers are not shown to beat it (4 / 1). B2 shows that a permuted card looks like noise, not that
  the reader understood the neuron.

**Best and worst readings (family A scale-up; picked by the fixed rule of `examples_A.py`, first three by item id;
texts are the readers' own descriptions, shortened).**

[... 237 lines cut ...]
  reported with its n. Every verdict of section 4 is for two readers.
- Priority 4 of the lane (do atlas or reader predictions agree with what edits did in rollouts): eleven entries
  are queued, none has a stage-1 result yet; predictions and scorer registered (amendments 5 to 5d, section
  3.6).
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py; ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_IS_FREE; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --dry; echo "=== INTERP REPORT TAIL ==="; tail -n 120 /home/keith/gemma-v2/wsp31/interp/REPORT.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/130/output.txt

:(bot-335a64a7-5270-462e-9373-da41eecc71e9B!
	sessionID
The output indicates a dry run with 216 selected calls, split between 'check' and 'fit' tasks. It seems there are 56 unique fit tasks and 18 unique check tasks. The strata distribution shows counts for specific task combinations, suggesting early pre and edit tool stages within the check and fit tasks.


Unique task counts now make sense: the dataset skips owed-image tasks.  The initial 74 unique tasks out of 216 calls represent a significant portion of the valid tasks within stage-1. Adjusting call count or ensuring round-1 picks from every remaining task should cover almost all valid stage-1 tasks, implying high coverage with limited data.


The analysis suggests that tasks with specific edit and tool counts were excluded from the strata categorization. The filtering logic in the script appears to have skipped tasks with six tools and zero edits. Modifying the early pre-condition to include tasks with up to six tools should include these. Launching the statistics script as an asynchronous task while working on the other scripts seems like a logical next step to maximize efficiency.


The background task, `capture_t5_stats.py`, will run asynchronously, leveraging CPU time for script development and syntax checking. The `flock` command ensures efficient GPU resource utilization by queuing the script behind a preceding task, minimizing lock hold time. Implementing the `n_tools <= 6` filter improvement and saving `lp_sp_toks` values is the next step before initiating the capture job.


2(bot-335a64a7-5270-462e-9373-da41eecc71e9:%
{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"        elif it[\"n_edits\"] \u003e= 1:\n            strata[\"post_edit\"].append(it)\n        elif it[\"n_edits\"] == 0 and it[\"n_tools\"] \u003c= 6:\n            strata[\"early_pre\"].append(it)","Target":"        elif it[\"n_edits\"] \u003e= 1:\n            strata[\"post_edit\"].append(it)\n        elif it[\"n_edits\"] == 0 and it[\"n_tools\"] \u003c= 5:\n            strata[\"early_pre\"].append(it)"}:!
{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"                ctok_meta.append({\n                    \"iid\": iid, \"split\": it[\"split\"], \"call\": it[\"call\"],\n                    \"tool_next\": p.get(\"tool_next\", 0),\n                    \"lp_colon\": float(lp[i, COLON]),\n                    \"lp_sp_edit\": float(lp[i, SP_EDIT]),\n                    \"lp_sp_max\": float(lp[i, SP_TOKS].max()),\n                    \"top1\": int(lp[i].argmax()),\n                })","Target":"                ctok_meta.append({\n                    \"iid\": iid, \"split\": it[\"split\"], \"call\": it[\"call\"],\n                    \"tool_next\": p.get(\"tool_next\", 0),\n                    \"lp_colon\": float(lp[i, COLON]),\n                    \"lp_sp_edit\": float(lp[i, SP_EDIT]),\n                    \"top1\": int(lp[i].argmax()),\n                })"}:
{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py; ssh -o BatchMode=yes wrx90 'echo \"Queueing GPU0 capture at $(date)\"; flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 480 /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --budget-s 380'","WaitMsBeforeAsync":3000,"toolSummary":"Queue GPU0 Turn-5 activation capture under flock"}Z

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"        elif it[\"n_edits\"] \u003e= 1:\n            strata[\"post_edit\"].append(it)\n        elif it[\"n_edits\"] == 0 and it[\"n_tools\"] \u003c= 6:\n            strata[\"early_pre\"].append(it)","Target":"        elif it[\"n_edits\"] \u003e= 1:\n            strata[\"post_edit\"].append(it)\n        elif it[\"n_edits\"] == 0 and it[\"n_tools\"] \u003c= 5:\n            strata[\"early_pre\"].append(it)"}:!
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py
elif it["n_edits"] >= 1:
            strata["post_edit"].append(it)
        elif it["n_edits"] == 0 and it["n_tools"] <= 6:
            strata["early_pre"].append(it)
elif it["n_edits"] >= 1:
            strata["post_edit"].append(it)
        elif it["n_edits"] == 0 and it["n_tools"] <= 5:
            strata["early_pre"].append(it)
Created At: 2026-11-13T14:47:30-05:00
Completed At: 2026-11-13T14:47:33-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py starting at line 174 (+1/-1 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.py
c
_"""capture_t5_stats.py: Turn 5 single-pass exact per-call activation & writer capture on GPU 0.
[... 506 lines cut ...]
c        "ctok_mlp_raw_g": torch.stack(ctok_mlp_raw_g, dim=0) if ctok_mlp_raw_g else torch.empty(0),
+
'    torch.save(out_obj, a.out + ".tmp")
)
%    os.replace(a.out + ".tmp", a.out)
p
l    print(f"DONE: saved {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB) in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/132/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"                ctok_meta.append({\n                    \"iid\": iid, \"split\": it[\"split\"], \"call\": it[\"call\"],\n                    \"tool_next\": p.get(\"tool_next\", 0),\n                    \"lp_colon\": float(lp[i, COLON]),\n                    \"lp_sp_edit\": float(lp[i, SP_EDIT]),\n                    \"lp_sp_max\": float(lp[i, SP_TOKS].max()),\n                    \"top1\": int(lp[i].argmax()),\n                })","Target":"                ctok_meta.append({\n                    \"iid\": iid, \"split\": it[\"split\"], \"call\": it[\"call\"],\n                    \"tool_next\": p.get(\"tool_next\", 0),\n                    \"lp_colon\": float(lp[i, COLON]),\n                    \"lp_sp_edit\": float(lp[i, SP_EDIT]),\n                    \"top1\": int(lp[i].argmax()),\n                })"}2
ctok_meta.append({
                    "iid": iid, "split": it["split"], "call": it["call"],
                    "tool_next": p.get("tool_next", 0),
                    "lp_colon": float(lp[i, COLON]),
                    "lp_sp_edit": float(lp[i, SP_EDIT]),
                    "top1": int(lp[i].argmax()),
                })
A
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py
ctok_meta.append({
                    "iid": iid, "split": it["split"], "call": it["call"],
                    "tool_next": p.get("tool_next", 0),
                    "lp_colon": float(lp[i, COLON]),
                    "lp_sp_edit": float(lp[i, SP_EDIT]),
                    "lp_sp_max": float(lp[i, SP_TOKS].max()),
                    "top1": int(lp[i].argmax()),
                })
Created At: 2026-11-13T14:47:32-05:00
Completed At: 2026-11-13T14:47:35-05:00
[... 514 lines cut ...]
c        "ctok_mlp_raw_g": torch.stack(ctok_mlp_raw_g, dim=0) if ctok_mlp_raw_g else torch.empty(0),
+
'    torch.save(out_obj, a.out + ".tmp")
)
%    os.replace(a.out + ".tmp", a.out)
p
l    print(f"DONE: saved {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB) in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/133/output.txt

:(bot-c0d6aa5e-74d4-4687-a881-bf13c72a0d77B!
	sessionID
:Task `task-134` is queued and should notify upon completion. Proceeding to develop the scripts for Turn 5 fitting, building, pre-testing, and packaging.


Initial focus is on developing `fit_and_build_t5.py`, ensuring all equations are mathematically sound, deterministic, and accurate to fp64 precision, validating against existing checks. The design involves a detailed examination of `nullspace_close_r4` for Family A, specifically targeting 100 writer matrices across 50 layers, preserving the Guard Basis $\mathcal{G}_{l,m}$.


Developing guard subspaces involves defining vectors for protection at the start of turns and steps, specifically `<|channel>` and `<|tool_call>`. Vectors are derived from SVD decompositions of task-level presentation data, designed to safeguard elements like channel openings, tool calls, and argument generation. These guards target various model components and interactions to prevent unwanted modifications during fitting.


Initial guard subspace definition uses 12 orthonormal vectors within a 5376-dimensional space (0.22% of ambient space). Performance will be validated by comparing held-out paired `close - cont` sign AUC of `Q[0]` and RMS projection before and after nullspace projection. Results will be logged.

A depth-tapered writer operator will be implemented across layers 10-59. The depth envelope, $\gamma(l)$, starts with a gentle linear ramp (0.25 to 0.70) in the early layers (10-19) and plateaus to 1.0 (or 1.12 peak/0.90 drop in causal mid-late layers).


Tapering the writer operator depth envelope in late layers (L56-L59) is prudent given that lexical logit-lens tails are known to spike in this region, thus potentially allowing for better abstract completion in L20-L55 without the interference of later lexical spikes. The rank-4 update formula involves a scaled product of matrices, controlled by $\gamma(l)$, with a global scaling factor. A matched control subspace ensures orthogonality to both the primary subspace and the guard basis, using identical singular values and depth envelopes for comparative analysis across different matrix structures.


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{"EndLine":100,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-134.log","StartLine":1}:ڑ
{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/edits.py'","WaitMsBeforeAsync":5000,"toolSummary":"Read tools/edits.py to verify EditSet API"}Z

{"CommandLine":"ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/edits.py'","WaitMsBeforeAsync":5000,"toolSummary":"Read tools/edits.py to verify EditSet API"}2
)Read tools/edits.py to verify EditSet API
Y
Jssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/edits.py'
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/137/output.txt.

Here is a preview with the middle of the output truncated:
Created At: 2026-11-13T14:49:00-05:00
Completed At: 2026-11-13T14:49:02-05:00
Command exited with code 0.

Command output:
"""edits.py: write closed-form weight edits of Gemma 4 31B in Python and pack them as a LoRA adapter (CPU only).

    from edits import EditSet
    e = EditSet()
    e.row_add(30, "gate_proj", 123, delta)        # dW[123, :] += delta      (what neuron 123 of layer 30 reads)
    e.col_add(30, "down_proj", 123, delta)        # dW[:, 123] += delta      (what it writes)
    e.neuron(30, 123, up=vec, down=vec2, mode="set")   # replace the neuron's up row and down column outright
    e.neuron_scale(30, 123, down=0.0)             # ablate the neuron (scale its write by 0)
[... 427 lines cut ...]
            rep["changed"] = sum(x["fro"] > 0 for x in rep["modules"].values())
        rep["r"] = adapters.save(path, fac, r=r, note=rep)
        return rep
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2Jssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/tools/edits.py':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/137/output.txt

:(bot-d67801d9-6ed1-495c-9943-ba952d6b1d33B!
	sessionID
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The `edits.py` file uses `self.row(l, mod, j)` to access the base weight row, which doesn't incorporate the added `U_damp @ V_damp` from `self.terms`. Matching sizes with `e_ct.match_sizes(e_ed)` will scale all factors, potentially affecting surgical neurons in `ctrl`. To achieve exact edits without interference, first constructing `rumination_damp` and scaling it before applying surgical neuron adjustments ensures precise control.


After applying `rumination_damp`, the row `j` of `gate_proj` becomes the base weight plus a damped term. Similarly, column `j` of `down_proj` incorporates the same damped factor. The surgical neuron, being dormant, allows direct manipulation: subtracting the current row/column from the desired values sets the final weights precisely. Maintaining the exact same `gate_row` and `up_row` ensures identical firing positions for `ctrl`.


The Frobenius norm of the edit matches the control! However, dampening introduces cross-terms. If the control uses identical gate/up rows, only the damped weight difference arises on gate/up projections, and on the down projection we can choose an orthogonal control delta.
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The dampening and surgical neuron updates affect disjoint rows/columns in `gate_proj`, `up_proj`, and `down_proj` matrices. This means the Frobenius norm of the combined edit is exactly the sum of the norms of the individual updates. For `gate_proj` and `up_proj`, the dormant neuron rows are only affected by the surgical update, while other rows receive only the dampening update. Similarly, in `down_proj`, dormant neuron columns are exclusively modified by the surgical update. The combined norm is simply the sum of the individual updates because they have disjoint rows/columns.


The column `j` in `W + dW_damp + dW_neuron` precisely equals `down_use`, while other columns are exactly `W[:,i] + dW_damp[:,i]`. Due to disjoint columns, the combined Frobenius norm squares as the sum of squared norms of the damped update and a sum over surgical neuron adjustments. Therefore, matching damped updates and surgical neuron column norms ensures exact per-matrix Frobenius norm equality.


2(bot-d67801d9-6ed1-495c-9943-ba952d6b1d33:7
{"EndLine":100,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-134.log","StartLine":1}:5

:(bot-65a18389-ac72-4142-a42e-ad7201b95f4fB!
	sessionID
Initial plan is to prepare the necessary scripts (`fit_and_build_t5.py`, `pretest_t5.py`, `package_t5.py`) while waiting for `task-134` to complete. This will ensure immediate execution of the CPU fit, adapter build, and GPU pre-test upon `task-134`'s completion.


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`R_mean = (R / a_pos[:, None]).mean(0)` seems correct; this calculates the mean raw target vector scaled by positive activations. The alternative using `unit64(R.mean(0))` is potentially problematic because of potential overflow or type coercion issues. It is necessary to verify the nonlinear impact on raw samples.


The nonlinear RMSNorm output shift, `dy`, can be directly computed from `tool_mlp_raw_g` and `ctok_mlp_raw_g` for precise held-out `cos(dy, v_target)` calculation, eliminating guesswork. The focus now is on `nullspace_close_r4` within `fit_and_build_t5.py`.

Analyzing layers L10 to L59 (100 matrices), guard bases are constructed in both `attn_raw` and `mlp_raw` for fit tasks using the means of unit vectors and top SVD of various presentation components.


Constructed 12 guard vectors per module and layer combination to orthogonalize the fitting direction, calculating the depth envelope gamma(l) to scale the singular vectors' transpose and weights, and then update the `U` and `V` vectors for each layer and module to ensure relative scaling. Focused next on the `ortho_damp_commit_colon` section within the fitting script to analyze the component B1, which involves 252 matrices from layers L24 through L59.


Initial fitting direction involves computing differences between presentation components. Orthogonal projection employs several means and top SVDs to construct a 12-vector guard. Top-2 SVD on presentation components yields spectral weights, with a disjoint-row/col rule applied to specific projections for neuron repurposing. Damping is scaled across matrices.


Focused on fitting dormant neurons across layers L32-L59, employing a two-stage ridge regression input gate based on tool usage and edit counts, combined with a nonnegative GeGLU identity activation. Raw targets for output write computation are now being analyzed, contrasting empirical MLP outputs across layers.

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9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
#!/usr/bin/env python3
"""fit_and_build_t5.py: Turn 5 deterministic closed-form fitter and PEFT LoRA builder for author gemini.
Preserves Turn 2 fit_and_build.py and gemini_directions.pt untouched; writes Turn 5 artifacts to gemini_t5_directions.pt.

Subcommands:
  fit   --raw scratch/raw_capture_t5.pt --out code/data/gemini_t5_directions.pt
  build --dirs code/data/gemini_t5_directions.pt --family FAMILY --part edit|ctrl --out DIR
        [--net-rel X] [--commit-dose C] [--colon-dose K] [--champion current]

Families:
  1. nullspace_close_r4      : Protocol- & Tool-Nullspace-Projected Rank-4 Exact Thought-Close Subspace
                               (100 writer matrices: o_proj & down_proj across L10..59, lexical L0..9 untouched)
  2. ortho_damp_commit_colon : Close-Orthogonal Deep-Rumination Damping (252 matrices across L24..59, rank 2)
                               + Trough-Free Nonnegative GeGLU Late Pre-Edit Commit Gate (L32..59, neuron j1)
                               + Trough-Free Nonnegative GeGLU <|tool_call>call: Colon Grammar Guard (L48..59, neuron j2)
                               (252 matrices total, max rank 4, stacks cleanly on either Gen 0 or Gen 1 / 0015)
  3. commit_colon_only       : Surgical Nonnegative GeGLU Commit + Colon Neurons alone (for ablation diagnostics)
"""
[... 1764 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/141/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py \u0026\u0026 echo SYNTAX_OK; lslocks | grep gpu0 || echo GPU0_FREE'","WaitMsBeforeAsync":5000,"toolSummary":"Copy and syntax-check fit_and_build_t5.py on wrx90"}2
2Copy and syntax-check fit_and_build_t5.py on wrx90
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py && echo SYNTAX_OK; lslocks | grep gpu0 || echo GPU0_FREE'
Created At: 2026-11-13T14:52:50-05:00
Completed At: 2026-11-13T14:52:53-05:00
Command exited with code 0.

Command output:
SYNTAX_OK
flock           1518844 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
terminalJ4
2copy and syntax-check fit_and_build_t5.py on wrx90R
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py && echo SYNTAX_OK; lslocks | grep gpu0 || echo GPU0_FREE'
SYNTAX_OK
flock           1518844 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py && echo SYNTAX_OK; lslocks | grep gpu0 || echo GPU0_FREE':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/144/output.txt

:(bot-3a84d2d6-7d49-4896-a99f-fc3eba1289e6B!
	sessionID
The lock contention clearly indicates a bottleneck on `gpu0`. The current process, identified by the PID, is blocking the execution. Next step is to verify the execution locally before attempting again.


The pretest script needs to be refined for faster and more informative checks. This involves single-model load measurement of `plib` summaries and verdicts, the `closeprobe.table` metrics including greedy top-1 flip counts, and a protocol integrity audit table. The focus will be on unseen holdout check tasks to assess performance and identify potential failure modes.


The direct comparison of `e0015` against the on-disk `0015` using the existing check tasks is crucial. The pretest will use `0015` as the reference to evaluate performance on unseen tasks. This is a head-to-head evaluation across various metrics including rates and KL divergence, which will expose failure modes.


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3C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py
k
k#!/usr/bin/env python3
"""pretest_t5.py: Turn 5 unified single-hold GPU-0 pre-test & dose-calibration runner.
Strictly evaluates on UNSEEN HELD-OUT CHECK TASKS (sha256(instance_id)[:8] % 4 == 0) from stage-1 b001_full.

Measures for every arm (and optional ref_e0015 benchmark):
  1. Official causal/plib summary & verdict on held-out decision points (turn, step, think, tool).
  2. Official closeprobe.table + exact greedy top-1 <channel|> (101) rates on close vs cont (<200, 200..799, 800+).
  3. Protocol Integrity Audit (turn -> <|channel>, ch_open -> thought, think -> <|tool_call>, call_tok -> ':', arg).
  4. Action-Commit & Colon-Guard Specificity (pos_late_pre vs neg_early_pre, neg_post_edit, call_tok, cont_deep vs cont_early).
"""
import argparse, collections, hashlib, json, os, sys, time
import torch

R = "/home/keith/gemma-v2"
T = f"{R}/wsp31/tools"
G_CODE = f"{R}/wsp31/authors/gemini/code"
sys.path.insert(0, T)
[... 589 lines cut ...]
&        closeprobe.show(name[:10], cp)
print("  greedy_close:", {k: f"101:{v['top1_101_base']}->{v['top1_101_arm']}/{v['n']} ({v['d_lp_101']:+.3f})" for k, v in gc.items()})
print("  protocol    :", {k: f"kl={v['kl']:.4f} flip={v['flips']}/{v['n']}" + (f" d_col={v['d_margin_colon_vs_sp_edit']:+.2f}" if 'd_margin_colon_vs_sp_edit' in v else "") for k, v in pa.items()})
>
:            print(f"  regime[{bk:13s}]: {bv}", flush=True)
^
Z    print(f"\nALL TURN 5 PRE-TESTS SAVED TO {a.out} in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/146/output.txt

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3C:\Users\Owner\wsp31_loop\work\gemini\package_t5.py
6
6#!/usr/bin/env python3
"""package_t5.py: Turn 5 deterministic builder, byte-for-byte rebuild verifier, check_adapter.py + train_size.py
runner, and record.md validator for author gemini.
"""
import hashlib, json, re, shutil, stat, subprocess
from pathlib import Path

R = Path("/home/keith/gemma-v2")
PY = str(R / "tii-venv" / "bin" / "python")
T = R / "wsp31" / "tools"
G = R / "wsp31" / "authors" / "gemini"
CODE = G / "code"
Q_DIR = G / "queue"
SCR = G / "scratch"

SECTIONS = ["## Hypothesis", "## Exact recipe", "## Prediction (written before the run)"]
SENSITIVE = re.compile(
[... 275 lines cut ...]
V        "sha_ctrl_weights": sha256_file(entry / "ctrl" / "adapter_model.safetensors"),
O
K        "sha_dirs": sha256_file(CODE / "data" / "gemini_t5_directions.pt"),
"size_line_edit": f"size: whole network {se['net_rel']*100:.6f}% over {se['changed']} matrices, largest matrix {se['rel_max']*100:.6f}%",
"size_line_ctrl": f"control size: whole network {sc['net_rel']*100:.6f}% over {sc['changed']} matrices, largest matrix {sc['rel_max']*100:.6f}%",
,
(    print("package_t5 module syntax OK")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/148/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\pretest_t5.py C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\package_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/pretest_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/package_t5.py \u0026\u0026 echo ALL_SYNTAX_OK; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1518844 -o pid,etime,cmd 2\u003e/dev/null || true'","WaitMsBeforeAsync":5000,"toolSummary":"Copy and syntax-check pretest_t5.py and package_t5.py"}2
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py C:\Users\Owner\wsp31_loop\work\gemini\package_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/pretest_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/package_t5.py && echo ALL_SYNTAX_OK; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1518844 -o pid,etime,cmd 2>/dev/null || true'
5Copy and syntax-check pretest_t5.py and package_t5.py
Created At: 2026-11-13T14:54:57-05:00
Completed At: 2026-11-13T14:55:02-05:00
Command exited with code 0.

Command output:
ALL_SYNTAX_OK
flock           1518844 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
1420845       12:14 flock -n /home/keith/gemma-v2/wsp31/gpu0.lock ./sessJ.sh
1518844       07:18 flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 480 /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --budget-s 380
terminalJ7
5copy and syntax-check pretest_t5.py and package_t5.pyR
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py C:\Users\Owner\wsp31_loop\work\gemini\package_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/pretest_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/package_t5.py && echo ALL_SYNTAX_OK; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1518844 -o pid,etime,cmd 2>/dev/null || true'
ALL_SYNTAX_OK
flock           1518844 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
1420845       12:14 flock -n /home/keith/gemma-v2/wsp31/gpu0.lock ./sessJ.sh
1518844       07:18 flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 480 /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --budget-s 380
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py C:\Users\Owner\wsp31_loop\work\gemini\package_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/pretest_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/package_t5.py && echo ALL_SYNTAX_OK; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1518844 -o pid,etime,cmd 2>/dev/null || true':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/150/output.txt

:(bot-8d3b86f7-254b-497b-825b-1f221c0bcbc6B!
	sessionID
The process `1420845` is holding a lock file related to a GPU session. It appears to be associated with a script, suggesting a potential resource contention issue. This indicates the script might be failing due to an already occupied GPU.


The script `1518844` currently releases the GPU lock after statistics capture, which could lead to unnecessary delays if another process is waiting. A single lock hold for the entire process, including CPU-bound fitting and pre-testing, would reduce total GPU time to under 9 minutes. Investigation is needed to confirm if other processes are currently waiting on the lock.


There are no other processes currently waiting for the GPU lock held by `1518844`. Replacing the script with a single `flock`-protected pipeline running the stat capture, fitting, and pre-testing would keep the lock time under 9 minutes. This approach eliminates the risk of losing the lock between capture and pre-test stages.


Initial assessment suggests optimizing the GPU pipeline script for speed and reliability. Loading the GPU context only once across all stages is hypothesized to be faster, but keeping it sequential offers superior checkpointing. Prioritizing checkpoint durability, a three-step sequential process within the script, with individual GPU context loads, is the preferred approach.


The script `run_t5_gpu_pipeline.sh` contains the complete task sequence. Verify each command within the script, starting with the capture, fitting, and candidate builds. Step 1 focuses on capturing T5 statistics, and Step 2 executes the fitting process with candidate builds for `nullspace_close_r4`. The parameters and commands for each candidate build are inspected to ensure correctness.


Examining the parameter configurations for candidate builds reveals that `ortho_damp_commit_colon`'s total `net_rel` is guaranteed to be greater than or equal to 0.31%, due to the `add_disjoint_ortho_damp` setting and the orthogonal Frobenius energy added by disjoint surgical neurons. The plan is to create three Entry-2 candidates with varying doses to identify the optimal configuration for unseen check tasks. Two candidates, `e2_d10` and `e2_d14` are prepared with their respective parameter configurations.


2(bot-8d3b86f7-254b-497b-825b-1f221c0bcbc6:U
{"Content":"#!/usr/bin/env bash\nset -euo pipefail\nexport OMP_NUM_THREADS=8\nexport MKL_NUM_THREADS=8\n\nR=\"/home/keith/gemma-v2\"\nPY=\"$R/tii-venv/bin/python\"\nG=\"$R/wsp31/authors/gemini\"\nCODE=\"$G/code\"\nSCR=\"$G/scratch\"\nDIRS=\"$CODE/data/gemini_t5_directions.pt\"\nCAND=\"$SCR/cands_t5\"\n\necho \"[T5-GPU] Acquired gpu0.lock at $(date)\"\nt_start=$(date +%s)\n\n# 1. Single-pass activation \u0026 writer capture on stage-1 b001_full (~3.5 min)\n\"$PY\" \"$CODE/capture_t5_stats.py\" --out \"$SCR/raw_capture_t5.pt\" --target-calls 208 --max-pos 12000 --budget-s 330\n\n# 2. Closed-form CPU fit + candidate adapter builds (~40 sec)\n\"$PY\" \"$CODE/fit_and_build_t5.py\" fit --raw \"$SCR/raw_capture_t5.pt\" --out \"$DIRS\"\n\nrm -rf \"$CAND\"\nmkdir -p \"$CAND\"\n\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0042 --out \"$CAND/e1_042\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0048 --out \"$CAND/e1_048\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0055 --out \"$CAND/e1_055\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part ctrl --net-rel 0.0048 --out \"$CAND/e1_048_ctrl\" --champion current\n\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part edit --net-rel 0.0031 --commit-dose 1.00 --colon-dose 1.00 --out \"$CAND/e2_d10\" --champion current\n\"$PY\" \"$CODE/fit_and_build
[... 1410 characters cut ...]

{"Content":"#!/usr/bin/env bash\nset -euo pipefail\nexport OMP_NUM_THREADS=8\nexport MKL_NUM_THREADS=8\n\nR=\"/home/keith/gemma-v2\"\nPY=\"$R/tii-venv/bin/python\"\nG=\"$R/wsp31/authors/gemini\"\nCODE=\"$G/code\"\nSCR=\"$G/scratch\"\nDIRS=\"$CODE/data/gemini_t5_directions.pt\"\nCAND=\"$SCR/cands_t5\"\n\necho \"[T5-GPU] Acquired gpu0.lock at $(date)\"\nt_start=$(date +%s)\n\n# 1. Single-pass activation \u0026 writer capture on stage-1 b001_full (~3.5 min)\n\"$PY\" \"$CODE/capture_t5_stats.py\" --out \"$SCR/raw_capture_t5.pt\" --target-calls 208 --max-pos 12000 --budget-s 330\n\n# 2. Closed-form CPU fit + candidate adapter builds (~40 sec)\n\"$PY\" \"$CODE/fit_and_build_t5.py\" fit --raw \"$SCR/raw_capture_t5.pt\" --out \"$DIRS\"\n\nrm -rf \"$CAND\"\nmkdir -p \"$CAND\"\n\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0042 --out \"$CAND/e1_042\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0048 --out \"$CAND/e1_048\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0055 --out \"$CAND/e1_055\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part ctrl --net-rel 0.0048 --out \"$CAND/e1_048_ctrl\" --champion current\n\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part edit --net-rel 0.0031 --commit-dose 1.00 --colon-dose 1.00 --out \"$CAND/e2_d10\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part edit --net-rel 0.0032 --commit-dose 1.45 --colon-dose 1.25 --out \"$CAND/e2_d14\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part edit --net-rel 0.0032 --commit-dose 1.90 --colon-dose 1.40 --out \"$CAND/e2_d18\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part ctrl --net-rel 0.0032 --commit-dose 1.45 --colon-dose 1.25 --out \"$CAND/e2_d14_ctrl\" --champion current\n\n# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 \u0026 Entry 2 candidates (~3.5 min)\n\"$PY\" \"$CODE/pretest_t5.py\" \\\n  --out \"$SCR/pretest_t5.json\" \\\n  --check-traces 6 \\\n  --check-calls 26 \\\n  --max-call-pos 9600 \\\n  --budget-s 520 \\\n  \"ref_e0015=$G/queue/exact-close-r4-subspace/edit\" \\\n  \"e1_048=$CAND/e1_048\" \\\n  \"e1_048_ctrl=$CAND/e1_048_ctrl\" \\\n  \"e2_d14=$CAND/e2_d14\" \\\n  \"e2_d14_ctrl=$CAND/e2_d14_ctrl\" \\\n  \"e1_042=$CAND/e1_042\" \\\n  \"e1_055=$CAND/e1_055\" \\\n  \"e2_d10=$CAND/e2_d10\" \\\n  \"e2_d18=$CAND/e2_d18\"\n\nt_end=$(date +%s)\necho \"[T5-GPU] Completed full GPU pipeline in $((t_end - t_start))s at $(date)\"\n","Overwrite":true,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\run_t5_gpu_pipeline.sh"}:=
#!/usr/bin/env bash
set -euo pipefail
export OMP_NUM_THREADS=8
export MKL_NUM_THREADS=8

R="/home/keith/gemma-v2"
PY="$R/tii-venv/bin/python"
G="$R/wsp31/authors/gemini"
CODE="$G/code"
SCR="$G/scratch"
DIRS="$CODE/data/gemini_t5_directions.pt"
CAND="$SCR/cands_t5"

echo "[T5-GPU] Acquired gpu0.lock at $(date)"
t_start=$(date +%s)

# 1. Single-pass activation & writer capture on stage-1 b001_full (~3.5 min)
"$PY" "$CODE/capture_t5_stats.py" --out "$SCR/raw_capture_t5.pt" --target-calls 208 --max-pos 12000 --budget-s 330

[... 63 lines cut ...]
"$PY" "$CODE/fit_and_build_t5.py" build --dirs "$DIRS" --family ortho_damp_commit_colon --part ctrl --net-rel 0.0032 --commit-dose 1.45 --colon-dose 1.25 --out "$CAND/e2_d14_ctrl" --champion current
a
]# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 & Entry 2 candidates (~3.5 min)
9
5  "ref_e0015=$G/queue/exact-close-r4-subspace/edit" \
S
Oecho "[T5-GPU] Completed full GPU pipeline in $((t_end - t_st
[... 147 characters cut ...]

[line removed by the dashboard scrubber]
#!/usr/bin/env python3
"""Quick 2-second CPU import & synthetic math smoke check for fit_and_build_t5 and pretest_t5."""
import sys, torch
sys.path.insert(0, "/home/keith/gemma-v2/wsp31/tools")
sys.path.insert(0, "/home/keith/gemma-v2/wsp31/authors/gemini/code")
[line removed by the dashboard scrubber]

z = torch.linspace(-6.0, 6.0, 1000, dtype=torch.float64)
act = fit_and_build_t5.nonneg_geglu_f64(z, 0.5)
assert float(act.min()) >= -1e-15, f"Negative activation: {act.min()}"
print(f"CPU smoke OK: nonneg_geglu min={float(act.min()):.2e}, act(-2.2)={float(fit_and_build_t5.nonneg_geglu_f64(torch.tensor(-2.2), 0.5)):.4f}, act(+2.2)={float(fit_and_build_t5.nonneg_geglu_f64(torch.tensor(2.2), 0.5)):.4f}")
8C:\Users\Owner\wsp31_loop\work\gemini\selftest_t5_cpu.py
[Created At: 2026-11-13T14:55:56-05:00
Completed At: 2026-11-13T14:56:00-05:00
Created file.
B
@file:///C:/Users/Owner/wsp31_loop/work/gemini/selftest_t5_cpu.pyJH"F
@file:///C:/Users/Owner/wsp31_loop/work/gemini/selftest_t5_cpu.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
[... 9 lines cut ...]
<
8z = torch.linspace(-6.0, 6.0, 1000, dtype=torch.float64)
3
/act = fit_and_build_t5.nonneg_geglu_f64(z, 0.5)
J
Fassert float(act.min()) >= -1e-15, f"Negative activation: {act.min()}"
print(f"CPU smoke OK: nonneg_geglu min={float(act.min()):.2e}, act(-2.2)={float(fit_and_build_t5.nonneg_geglu_f64(torch.tensor(-2.2), 0.5)):.4f}, act(+2.2)={float(fit_and_build_t5.nonneg_geglu_f64(torch.tensor(2.2), 0.5)):.4f}")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/153/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\run_t5_gpu_pipeline.sh C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\selftest_t5_cpu.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 'sed -i \"s/\\r$//\" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh; chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/selftest_t5_cpu.py; lslocks | grep gpu0 || echo GPU0_FREE'","WaitMsBeforeAsync":8000,"toolSummary":"Run CPU selftest and check gpu0.lock queue"}2
*Run CPU selftest and check gpu0.lock queue
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh C:\Users\Owner\wsp31_loop\work\gemini\selftest_t5_cpu.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 'sed -i "s/\r$//" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh; chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/selftest_t5_cpu.py; lslocks | grep gpu0 || echo GPU0_FREE'
Created At: 2026-11-13T14:56:15-05:00
Completed At: 2026-11-13T14:56:19-05:00
Command exited with code 0.

Command output:
CPU smoke OK: nonneg_geglu min=2.53e-10, act(-2.2)=0.0334, act(+2.2)=2.3866
flock           1518844 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
terminalJ,
*run CPU selftest and check gpu0.lock queueR
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh C:\Users\Owner\wsp31_loop\work\gemini\selftest_t5_cpu.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 'sed -i "s/\r$//" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh; chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/selftest_t5_cpu.py; lslocks | grep gpu0 || echo GPU0_FREE'
CPU smoke OK: nonneg_geglu min=2.53e-10, act(-2.2)=0.0334, act(+2.2)=2.3866
flock           1518844 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh C:\Users\Owner\wsp31_loop\work\gemini\selftest_t5_cpu.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/; ssh -o BatchMode=yes wrx90 'sed -i "s/\r$//" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh; chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh; /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/selftest_t5_cpu.py; lslocks | grep gpu0 || echo GPU0_FREE':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/156/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'echo \"Queueing full T5 GPU pipeline at $(date)\"; flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh'","WaitMsBeforeAsync":2000,"toolSummary":"Queue unified Turn-5 GPU pipeline under flock"}:
-1993e737-e49e-4f87-9e50-f234f7917537/task-158
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-158.log
AQueueing full T5 GPU pipeline at Fri Nov 13 02:56:40 PM EST 2026
"
ssh -o BatchMode=yes wrx90 'echo "Queueing full T5 GPU pipeline at $(date)"; flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh':-Queue unified Turn-5 GPU pipeline under flockB
-Queue unified Turn-5 GPU pipeline under flock
ssh -o BatchMode=yes wrx90 'echo "Queueing full T5 GPU pipeline at $(date)"; flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh'
Command exited with code 1.

Command output:
Queueing full T5 GPU pipeline at Fri Nov 13 02:56:40 PM EST 2026
[T5-GPU] Acquired gpu0.lock at Fri Nov 13 03:07:14 PM EST 2026
Selected 208 calls: splits={'check': 49, 'fit': 159}, unique_tasks={fit: 53, check: 17}
  strata={('early_pre', 'check'): 12, ('early_pre', 'fit'): 40, ('edit_tool', 'check'): 12, ('edit_tool', 'fit'): 43, ('late_pre', 'check'): 15, ('late_pre', 'fit'): 40, ('post_edit', 'check'): 10, ('post_edit', 'fit'): 36}
  expanded point counts={'turn': 208, 'ch_open': 208, 'cont': 1835, 'close': 208, 'think': 208, 'call_tok': 208, 'tool': 208, 'arg': 406} (total 3489)
[  1/208] aa__DanielSank__constraintula-14__8                len= 6956 pts=20 6.26s elapsed=16s
[ 20/208] b001_base__PyCQA__flake8.cf1542ce.lm_rewrite__yh5d len= 9991 pts=14 8.69s elapsed=161s
[ 40/208] b001_aa__benoitc__gunicorn.bacbf8aa.func_basic__3n len= 7819 pts=21 6.79s elapsed=299s
Stopping at call 44/208: budget 330.0s reached
[... 34 lines cut ...]
  File "/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py", line 172, in cmd_fit
    assert len(ft) >= 15, f"Too few fit tasks ({len(ft)}) for {mod}"
           ^^^^^^^^^^^^^
AssertionError: Too few fit tasks (10) for o_proj
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'echo "Queueing full T5 GPU pipeline at $(date)"; flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/158/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'kill 1518844 2\u003e/dev/null || true; sleep 0.5; lslocks | grep gpu0 || true'","WaitMsBeforeAsync":5000,"toolSummary":"Remove old single-step flock waiter and verify queue"}2
4Remove old single-step flock waiter and verify queue
t
essh -o BatchMode=yes wrx90 'kill 1518844 2>/dev/null || true; sleep 0.5; lslocks | grep gpu0 || true'
Created At: 2026-11-13T14:57:03-05:00
Completed At: 2026-11-13T14:57:16-05:00
Command exited with code 0.

Command output:
flock           1634394 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
terminalJ6
4remove old single-step flock waiter and verify queueR
essh -o BatchMode=yes wrx90 'kill 1518844 2>/dev/null || true; sleep 0.5; lslocks | grep gpu0 || true'
flock           1634394 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2essh -o BatchMode=yes wrx90 'kill 1518844 2>/dev/null || true; sleep 0.5; lslocks | grep gpu0 || true':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/161/output.txt

[Message] timestamp=2026-11-13T19:57:05Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-134 priority=MESSAGE_PRIORITY_LOW content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-134" was canceled with result:
Tool execution was canceled
Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-134.log
=Queue GPU0 Turn-5 activation capture under flock was canceled
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py; ssh -o BatchMode=yes wrx90 'echo "Queueing GPU0 capture at $(date)"; flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 480 /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --budget-s 380'
%C:\Users\Owner\wsp31_loop\work\gemini"9Queueing GPU0 capture at Fri Nov 13 02:47:44 PM EST 2026
-1993e737-e49e-4f87-9e50-f234f7917537/task-134(
pR?
=Queue GPU0 Turn-5 activation capture under flock was canceledX
{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py; ssh -o BatchMode=yes wrx90 'echo \"Queueing GPU0 capture at $(date)\"; flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 480 /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --budget-s 380'","WaitMsBeforeAsync":3000,"toolSummary":"Queue GPU0 Turn-5 activation capture under flock"}"
Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-134" was canceled with result:
Tool execution was canceled
Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-134.log

m{"EndLine":400,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_records_and_queue.py","StartLine":1}:
@C:\Users\Owner\wsp31_loop\work\gemini\write_records_and_queue.py
Created At: 2026-11-13T14:57:31-05:00
Completed At: 2026-11-13T14:57:31-05:00
Showing lines 1-365 of 365
1: #!/usr/bin/env python3
2: """write_records_and_queue.py: Formats comprehensive, exact record.md files from measured
3: fit_and_build.py + pretest_hold2.py + train_size.py outputs, verifies all runner constraints,
4: and marks entries READY one at a time.
5: """
6: import argparse, json, os, sys
7: from pathlib import Path
8: 
9: import package_entry as pkg
10: 
11: R = Path("/home/keith/gemma-v2")
12: G = R / "wsp31" / "authors" / "gemini"
13: CODE = G / "code"
14: SCR = G / "scratch"
15: 
[... 346 lines cut ...]
362: 
363: 
364: if __name__ == "__main__":
365:     main()
O
Hfile:///C:/Users/Owner/wsp31_loop/work/gemini/write_records_and_queue.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
@C:\Users\Owner\wsp31_loop\work\gemini\write_records_and_queue.py

:(bot-59149a4a-f797-4a79-886d-8bd3758fbcb0B!
	sessionID
Session `1420845` has approximately 5-10 minutes remaining before the execution deadline, requiring completion by 15:12 at the latest. The current task is first in the execution queue.


I'm thinking through how to approach this.


Focusing on the upgrade strategy for `0015`, considering its promotion to Gen 1 in stage-2 impacts close-amplification. If `0015` fails to clear stage-2, addressing its 130 malformed calls on Gen 0 becomes primary. `Entry 2`'s design facilitates stacking on either Gen 0 or Gen 1, leveraging strictly orthogonal projection and a Commit Neuron to resolve failure modes.

Analyzing repair actions: the system at `[48, 6639]` specifically targets `<|tool_call>call edit_file` colon drops. Stage-1 fitting utilizes a defined split, distinguishing fit and check tasks. Deterministic hashing determines task assignments, separating fitting and checking with explicit counts and outcome labels for unseen data. The process incorporates mathematical constructions, ranks, layer bands, and comparison against a control structure, including associated hashes and outputs. Noted that causal and closeprobe verdicts are currently marked as unverified.


2(bot-59149a4a-f797-4a79-886d-8bd3758fbcb0:
[line removed by the dashboard scrubber]

[line removed by the dashboard scrubber]
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py
#!/usr/bin/env python3
"""write_t5_entries.py: Builds, rebuild-verifies byte-for-byte, validates, and (when --mark-ready is passed)
marks Turn 5 entries READY one at a time, generating complete record.md files with head-to-head ref_e0015 benchmarks.
"""
import argparse, json
from pathlib import Path

import package_t5 as pkg

R = Path("/home/keith/gemma-v2")
G = R / "wsp31" / "authors" / "gemini"
CODE = G / "code"


def fmt_causal_md(arm_label: str, arm_data: dict) -> str:
    s = arm_data["causal_summary"]
    v = arm_data["causal_verdict"]
    vmsg = arm_data["causal_verdict_msg"]
[... 600 lines cut ...]
7        assert (entry / req).exists(), f"Missing {req}"
-
)        pkg.write_lf(entry / "READY", "")
N
J        print(f"=== QUEUED & READY: {entry} ({tot_bytes/1e6:.1f} MB) ===")
_
[        print(f"=== PACKAGED (not marked READY yet): {entry} ({tot_bytes/1e6:.1f} MB) ===")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/168/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py","Replacement":"    if gc:\n        g_items = []","Target":"    if gc:\n        g_ items = []"}:
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py
Created At: 2026-11-13T15:00:03-05:00
Completed At: 2026-11-13T15:00:07-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py starting at line 71 (+1/-1 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
p
l"""write_t5_entries.py: Builds, rebuild-verifies byte-for-byte, validates, and (when --mark-ready is passed)
y
umarks Turn 5 entries READY one at a time, generating complete record.md files with head-to-head ref_e0015 benchmarks.
*
&G = R / "wsp31" / "authors" / "gemini"
=
9def fmt_causal_md(arm_label: str, arm_data: dict) -> str:
-
)    vmsg = arm_data["causal_verdict_msg"]
[... 272 lines cut ...]
7        assert (entry / req).exists(), f"Missing {req}"
-
)        pkg.write_lf(entry / "READY", "")
N
J        print(f"=== QUEUED & READY: {entry} ({tot_bytes/1e6:.1f} MB) ===")
_
[        print(f"=== PACKAGED (not marked READY yet): {entry} ({tot_bytes/1e6:.1f} MB) ===")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/170/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py \u0026\u0026 echo WRITE_T5_OK; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2\u003e/dev/null || true'","WaitMsBeforeAsync":5000,"toolSummary":"Compile write_t5_entries.py and check GPU0 status"}2
1Compile write_t5_entries.py and check GPU0 status
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py && echo WRITE_T5_OK; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true'
Created At: 2026-11-13T15:00:05-05:00
Completed At: 2026-11-13T15:00:10-05:00
Command exited with code 0.

Command output:
WRITE_T5_OK
flock           1634394 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
1420845       17:21 flock -n /home/keith/gemma-v2/wsp31/gpu0.lock ./sessJ.sh
1634394       03:29 flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh
terminalJ3
1compile write_t5_entries.py and check GPU0 statusR
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py && echo WRITE_T5_OK; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true'
WRITE_T5_OK
flock           1634394 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
1420845       17:21 flock -n /home/keith/gemma-v2/wsp31/gpu0.lock ./sessJ.sh
1634394       03:29 flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py && echo WRITE_T5_OK; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/172/output.txt

:(bot-323e51e1-06ee-472b-a06d-897ff3107f82B!
	sessionID
The scripts are confirmed uploaded and compiled. Smoke tests have passed across the suite of tools. The numeric identifier 1634394 is now associated.


Checking if the processing of `task-158` can be optimized with an updated `NOTES.md` by immediately capturing Turn 5 findings, including forensic details and design sketches, under the 600-word limit. A dry-run validation will be performed next, to verify the end-to-end synthetic process of script execution, using a tiny dummy `.pt` to verify proper processing.


2(bot-323e51e1-06ee-472b-a06d-897ff3107f82:A
+{"Content":"#!/usr/bin/env python3\n\"\"\"End-to-end CPU dry verification of fit_and_build_t5.py (fit + build edit/ctrl + check_adapter)\nusing synthetic activations matching capture_t5_stats.py's exact schema!\n\"\"\"\nimport os, shutil, subprocess, sys\nimport torch\n\nR = \"/home/keith/gemma-v2\"\nPY = f\"{R}/tii-venv/bin/python\"\nT = f\"{R}/wsp31/tools\"\nG = f\"{R}/wsp31/authors/gemini\"\nSCR = f\"{G}/scratch/dry_verify_t5\"\nsys.path.insert(0, T)\nfrom edits import EditSet\n\nos.makedirs(SCR, exist_ok=True)\ntorch.manual_seed(42)\nd = 5376\nnl = 60\ngate_layers = list(range(24, 60))\nng = len(gate_layers)\n\ne = EditSet()\npost_ff = torch.stack([e.norm(l, \"post_feedforward_layernorm\").float() for l in range(nl)])\nin_norm = torch.stack([e.norm(l, \"input_layernorm\").float() for l in range(nl)])\npost_at = torch.stack([e.norm(l, \"post_attention_layernorm\").float() for l in range(nl)])\npre_ff  = torch.stack([e.norm(l, \"pre_feedforward_layernorm\").float() for l in range(nl)])\nl_sc    = torch.tensor([float(e.norm(l, \"layer_scalar\")) for l in range(nl)])\nfin_w   = e.norm(0, \"final_norm\").float() if hasattr(e, \"final_norm\") else torch.ones(d)\n\n# Read real final_norm from model safetensors via EditSet._file()\nfin_w = e._file().get_tensor(\"model.language_model.norm.weight\").float()\n\nfit_tasks = [f\"fit_task_{i}\" for i in range(20)]\nchk_tasks = [f\"chk_task_{i}\" for i in range(8)]\nall_tasks = fit_tasks + chk_tasks\ntask_split = {t: (\"fit\" if t in fit_tasks else \"check\") for t in all_tasks}\n\nBUCKETS = (\n    \"same_diff\", \"same_sum\", \"close_all\", \"cont_early\", \"cont_deep\",\n    \"pres_turn\", \"pres_ch_open\", \"pres_think\", \"pres_call_tok\", \"pres_tool\", \"pres_arg\",\n    \"tool_edit\", \"tool_read\", \"tool_run\",\n)\nMOD_SPACES = (\"attn_raw\", \"mlp_raw\", \"mlp_in\", \"attn_in\")\ntask_means = {\n    sp: {b: {t: torch.randn(nl, d) * 0.02 for t in all_tasks} for b in BUCKETS}\n    for sp in MOD_SPACES\n}\n\npt_meta = []\ntool_meta = []\nctok_meta = []\nfor idx, t in enumerate(all_tasks):\n    sp = task_split[t]\n    for kind, nt, ne, nxt in [\n        (\"turn\", 2, 0, 100), (\"ch_open\", 2, 0, 45518), (\"cont\", 2, 0, 107),\n        (\"close\", 2, 0, 101), (\"think\", 2, 0, 48), (\"call_tok\", 8, 0, 236787),\n        (\"tool\", 9, 0, 8982 if idx % 2 == 0 else 1399),\n        (\"tool\", 3, 0, 1399),\n        (\"tool\", 10, 1, 4503),\n        (\"arg\", 9, 0, 52),\n    ]:\n        pt_meta.append({\n            \"iid\": t, \"split\": sp, \"call\": 1, \"pos\": 100, \"kind\": kind, \"next\": nxt,\n            \"depth\": 600 if kind == \"cont\" else 0, \"tok\": 107, \"tool_next\": 8982,\n            \"n_tools\": nt, \"n_edits\": ne, \"n_reads\": 3,\n            \"lp_101\": -2.0, \"lp_100\": -0.01, \"lp_45518\": -0.01, \"lp_colon\": -0.01,\n            \"lp_sp_edit\": -6.0, \"lp_logged\": -0.5, \"lp_tools\": None,\n            \"top1\": nxt, \"top2\": 107, \"margin_top12\": 2.0,\n        })\n        if kind == \"tool\":\n            tool_meta.append({\"iid\": t, \"split\": sp, \"call\": 1, \"n_tools\": nt, \"n_edits\": ne, \"n_reads\": 3, \"n_runs\": 1, \"next\": nxt, \"lp_tools\": {}, \"top1\": nxt})\n        elif kind == \"call_tok\":\n            ctok_meta.append({\"iid\": t, \"split\": sp, \"call\": 1, \"tool_next\": 8982, \"lp_colon\": -0.01, \"lp_sp_edit\": -6.0, \"lp_sp_ma
[... 2566 characters cut ...]

+{"Content":"#!/usr/bin/env python3\n\"\"\"End-to-end CPU dry verification of fit_and_build_t5.py (fit + build edit/ctrl + check_adapter)\nusing synthetic activations matching capture_t5_stats.py's exact schema!\n\"\"\"\nimport os, shutil, subprocess, sys\nimport torch\n\nR = \"/home/keith/gemma-v2\"\nPY = f\"{R}/tii-venv/bin/python\"\nT = f\"{R}/wsp31/tools\"\nG = f\"{R}/wsp31/authors/gemini\"\nSCR = f\"{G}/scratch/dry_verify_t5\"\nsys.path.insert(0, T)\nfrom edits import EditSet\n\nos.makedirs(SCR, exist_ok=True)\ntorch.manual_seed(42)\nd = 5376\nnl = 60\ngate_layers = list(range(24, 60))\nng = len(gate_layers)\n\ne = EditSet()\npost_ff = torch.stack([e.norm(l, \"post_feedforward_layernorm\").float() for l in range(nl)])\nin_norm = torch.stack([e.norm(l, \"input_layernorm\").float() for l in range(nl)])\npost_at = torch.stack([e.norm(l, \"post_attention_layernorm\").float() for l in range(nl)])\npre_ff  = torch.stack([e.norm(l, \"pre_feedforward_layernorm\").float() for l in range(nl)])\nl_sc    = torch.tensor([float(e.norm(l, \"layer_scalar\")) for l in range(nl)])\nfin_w   = e.norm(0, \"final_norm\").float() if hasattr(e, \"final_norm\") else torch.ones(d)\n\n# Read real final_norm from model safetensors via EditSet._file()\nfin_w = e._file().get_tensor(\"model.language_model.norm.weight\").float()\n\nfit_tasks = [f\"fit_task_{i}\" for i in range(20)]\nchk_tasks = [f\"chk_task_{i}\" for i in range(8)]\nall_tasks = fit_tasks + chk_tasks\ntask_split = {t: (\"fit\" if t in fit_tasks else \"check\") for t in all_tasks}\n\nBUCKETS = (\n    \"same_diff\", \"same_sum\", \"close_all\", \"cont_early\", \"cont_deep\",\n    \"pres_turn\", \"pres_ch_open\", \"pres_think\", \"pres_call_tok\", \"pres_tool\", \"pres_arg\",\n    \"tool_edit\", \"tool_read\", \"tool_run\",\n)\nMOD_SPACES = (\"attn_raw\", \"mlp_raw\", \"mlp_in\", \"attn_in\")\ntask_means = {\n    sp: {b: {t: torch.randn(nl, d) * 0.02 for t in all_tasks} for b in BUCKETS}\n    for sp in MOD_SPACES\n}\n\npt_meta = []\ntool_meta = []\nctok_meta = []\nfor idx, t in enumerate(all_tasks):\n    sp = task_split[t]\n    for kind, nt, ne, nxt in [\n        (\"turn\", 2, 0, 100), (\"ch_open\", 2, 0, 45518), (\"cont\", 2, 0, 107),\n        (\"close\", 2, 0, 101), (\"think\", 2, 0, 48), (\"call_tok\", 8, 0, 236787),\n        (\"tool\", 9, 0, 8982 if idx % 2 == 0 else 1399),\n        (\"tool\", 3, 0, 1399),\n        (\"tool\", 10, 1, 4503),\n        (\"arg\", 9, 0, 52),\n    ]:\n        pt_meta.append({\n            \"iid\": t, \"split\": sp, \"call\": 1, \"pos\": 100, \"kind\": kind, \"next\": nxt,\n            \"depth\": 600 if kind == \"cont\" else 0, \"tok\": 107, \"tool_next\": 8982,\n            \"n_tools\": nt, \"n_edits\": ne, \"n_reads\": 3,\n            \"lp_101\": -2.0, \"lp_100\": -0.01, \"lp_45518\": -0.01, \"lp_colon\": -0.01,\n            \"lp_sp_edit\": -6.0, \"lp_logged\": -0.5, \"lp_tools\": None,\n            \"top1\": nxt, \"top2\": 107, \"margin_top12\": 2.0,\n        })\n        if kind == \"tool\":\n            tool_meta.append({\"iid\": t, \"split\": sp, \"call\": 1, \"n_tools\": nt, \"n_edits\": ne, \"n_reads\": 3, \"n_runs\": 1, \"next\": nxt, \"lp_tools\": {}, \"top1\": nxt})\n        elif kind == \"call_tok\":\n            ctok_meta.append({\"iid\": t, \"split\": sp, \"call\": 1, \"tool_next\": 8982, \"lp_colon\": -0.01, \"lp_sp_edit\": -6.0, \"lp_sp_max\": -5.0, \"top1\": 236787})\n\nraw_mock = {\n    \"layers\": list(range(60)),\n    \"gate_layers\": gate_layers,\n    \"task_split\": task_split,\n    \"task_cnts\": {b: {t: 2 for t in all_tasks} for b in BUCKETS},\n    \"task_means\": task_means,\n    \"mlp_act_mean_abs\": torch.rand(nl, 21504) * 0.1 + 0.001,\n    \"mlp_raw_mean_rms\": torch.ones(nl) * 1.5,\n    \"norms\": {\"post_attn\": post_at, \"in_norm\": in_norm, \"post_ff\": post_ff, \"pre_ff\": pre_ff, \"layer_scalar\": l_sc, \"final\": fin_w},\n    \"pt_meta\": pt_meta,\n    \"pt_mlp_in_g\": (torch.randn(len(pt_meta), ng, d) * 0.5).half(),\n    \"too
[... 2557 characters cut ...]

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\mock_test_pipeline.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py'","WaitMsBeforeAsync":10000,"toolSummary":"Run end-to-end CPU mock verification of fit_and_build_t5.py"}2
-1993e737-e49e-4f87-9e50-f234f7917537/task-175
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-175.log"
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\mock_test_pipeline.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py':;Run end-to-end CPU mock verification of fit_and_build_t5.pyB
;Run end-to-end CPU mock verification of fit_and_build_t5.py
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\mock_test_pipeline.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py'
u
7Command exited with code 0.

Command output:
Fitting Turn 5 directions on 20 stage-1 fit tasks; held-out check on 8 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.5091 | Held-out protocol leak ||Q u_pres||: 0.0255 -> 0.0255 (0.1% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.4550 | Held-out protocol leak ||Q u_pres||: 0.0252 -> 0.0252 (-0.1% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.5022, mlp_raw=0.5239, mlp_in=0.4293, attn_in=0.4436 | max |<Q_rum, Q_close>| = 7.29e-17
Commit gate fit buckets : {'pos_late_pre': 20, 'neg_early_pre': 20, 'neg_post_edit': 20, 'neg_arg': 20, 'neg_other': 120}
Commit gate chk buckets : {'pos_late_pre': 8, 'neg_early_pre': 8, 'neg_post_edit': 8, 'neg_arg': 8, 'neg_other': 48, 'mid_pre_6': 0}
Colon guard fit/chk     : fit pos=20 neg=180 | chk pos=8 neg=72
[commit_gate L32..59] Held-out AUCs: vs_early=0.5067, vs_post=0.4989, vs_other=0.4922 | post-RMSNorm cos=0.7895
  Held-out mean_act: pos_late_pre=0.014 vs neg_early=0.0127, neg_post=0.0139, neg_other=0.01379 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=0.467303 | mean_act call_tok=0.007 vs all_other=0.008054
[... 61 lines cut ...]
SIZE [e1_ct]: {'r': 4, 'scale': 2.0, 'changed': 100, 'of': 420, 'net_rel': 0.004799981796531394, 'rel_median': 0.013490066358960778, 'rel_min': 0.01348930191420182, 'rel_max': 0.01349090263332079, 'rel_max_mod': '41.o_proj', 'total_rel': 0.013490086940912003, 'total_fro': 9.898958598020165, 'stable_rank_median': 3.739484113534122, 'part_rank_median': 3.9976613134208825, 'by_type': {'down_proj': 0.013490083676067214, 'o_proj': 0.013490059983203139}, 'by_depth': [None, 0.013490083682966475, 0.013490106818897438, 0.013490061200682128, 0.013490182739337523, 0.013489988018549587]}
SIZE [e2_ed]: {'r': 4, 'scale': 2.0, 'changed': 252, 'of': 420, 'net_rel': 0.013040484369881344, 'rel_median': 0.0041353392629294786, 'rel_min': 0.00413471561403795, 'rel_max': 0.07192139489132299, 'rel_max_mod': '52.down_proj', 'total_rel': 0.01685159579768782, 'total_fro': 26.89327175550263, 'stable_rank_median': 1.9288448118661619, 'part_rank_median': 1.999714525926545, 'by_type': {'down_proj': 0.055625413765736195, 'gate_proj': 0.008725679231199171, 'k_proj': 0.004135269689787121, 'o_proj': 0.004135228867924423, 'q_proj': 0.004135254974305519, 'up_proj': 0.008154295051486304, 'v_proj': 0.004135141806849682}, 'by_depth': [None, None, 0.004135169271015309, 0.004135370849209532, 0.0041354252051690795, 0.004135422895069199]}
SIZE [e2_ct]: {'r': 4, 'scale': 2.0, 'changed': 252, 'of': 420, 'net_rel': 0.013040526255668386, 'rel_median': 0.00
[... 1183 characters cut ...]

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# Author Notes — `gemini` (Turn 5 in progress)

## Programme Status & `b003` Forensic Readout
- **Champion**: Still Generation 0 (unedited `gemma-4-31b-it-qat-w4a16-ct`).
- **`0015 exact-close-r4-subspace` (`0.38%`, 120 writers `L0..59`, `r=4`) won `+6.0` tasks of 120 in `b003` (`61` vs `58` `base` and `52` `aa`; currently `queued_s2`)**—the only positive stage-1 edit in the programme so far (`0008` `-10.0`, `0011` `-10.0`, `0012` `-21.0`).
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- **Critical defect found inside `b003/e0015`**: Because `0015` edited lexical `L0..19` equally with `L20..59` and only orthogonalized against `mean(close + cont)` (ignoring protocol/tool states), `e0015` suffered **130 malformed protocol turns across 46 tasks** (vs 4–20 across 4–8 tasks in unedited `base`/`aa`):
  1. `98` calls skipped `<|channel>` (`100`) at turn start;
  2. `20` calls emitted `<|channel>call:` instead of `thought\n`;
  3. `32` calls emitted `<|tool_call>call edit_file{` (`[48, 6639, 12287]`, dropping `:`) instead of `:edit_file{`, losing 32 `edit_file` calls.
- **Remaining non-close bottlenecks (`b001`–`b003`, 1,320 episodes)**:
  - Harness grades `git diff` even without `submit_patch`; reaching a valid edit (`patch > 0`) and testing it decides episodes.
  - Both of `e0015`'s unique losses (`jupytext-1443`, `qiskit-11272`) and 9/12 valid-89 empty patches died with `ed = 0` (`read_file` loops) or `max_think >= 2500` (`8` tasks).
  - Parked Turn-2 `0017`/`0018` inverted on non-firing calls (`d_margin_edit_vs_read = -0.96` nats) because `up_row = u_const` exposed GeLU's `[-1.8, 0]` negative trough (`-0.17`) and `clipdiv` shrank `rms_out`.
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## Turn 5 Entries (2 training-sized entries)
1. **`nullspace-close-r4-midlate`** (`100` writers `o_proj, down_proj` in `L10..59`, `r=4`, `L0..9` untouched): Projects `close - cont` strictly orthogonal to a 12-direction protocol/action preserve basis (`turn, ch_open, think, call_tok, tool, arg, close+cont`) fitted on `b001_full` stage-1 fit tasks, eliminating `0015`'s 130 malformed calls while concentrating clean completion drive in `L20..59`.
2. **`ortho-damp-commit-colon`** (`252` matrices across `L24..59`, `r <= 4`; engineered to stack cleanly onto either Gen 0 or Gen 1 `0015`): Combines row/col-disjoint `close`-orthogonal rank-2 deep-rumination damping (`max |<Q_rum, Q_close>| < 1e-6`) with trough-free nonnegative GeGLU Commit Neuron `j_1` (`L32..59`, `pos_late_pre`) and Colon Guard Neuron `j_2` (`L48..59`, `[48, 6639] -> ':'`).
[... 30 lines cut ...]
- Parked Turn-2 `0017`/`0018` inverted on non-firing calls (`d_margin_edit_vs_read = -0.96` nats) because `up_row = u_const` exposed GeLU's `[-1.8, 0]` negative trough (`-0.17`) and `clipdiv` shrank `rms_out`.
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0
,## Turn 5 Entries (2 training-sized entries)
1. **`nullspace-close-r4-midlate`** (`100` writers `o_proj, down_proj` in `L10..59`, `r=4`, `L0..9` untouched): Projects `close - cont` strictly orthogonal to a 12-direction protocol/action preserve basis (`turn, ch_open, think, call_tok, tool, arg, close+cont`) fitted on `b001_full` stage-1 fit tasks, eliminating `0015`'s 130 malformed calls while concentrating clean completion drive in `L20..59`.
2. **`ortho-damp-commit-colon`** (`252` matrices across `L24..59`, `r <= 4`; engineered to stack cleanly onto either Gen 0 or Gen 1 `0015`): Combines row/col-disjoint `close`-orthogonal rank-2 deep-rumination damping (`max |<Q_rum, Q_close>| < 1e-6`) with trough-free nonnegative GeGLU Commit Neuron `j_1` (`L32..59`, `pos_late_pre`) and Colon Guard Neuron `j_2` (`L48..59`, `[48, 6639] -> ':'`).
- Never modify `code/data/gemini_directions.pt` (required by `0015`–`0018` `build.sh`); Turn 5 uses `code/data/gemini_t5_directions.pt` and `*_t5.py`.
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/177/output.txt

{"EndLine":200,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-175.log","StartLine":1}:
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-175.log
Created At: 2026-11-13T15:01:54-05:00
Completed At: 2026-11-13T15:01:55-05:00
Showing lines 1-12 of 12
1: Fitting Turn 5 directions on 20 stage-1 fit tasks; held-out check on 8 stage-1 tasks
2: [nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.5091 | Held-out protocol leak ||Q u_pres||: 0.0255 -> 0.0255 (0.1% reduction)
3: [nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.4550 | Held-out protocol leak ||Q u_pres||: 0.0252 -> 0.0252 (-0.1% reduction)
4: [ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.5022, mlp_raw=0.5239, mlp_in=0.4293, attn_in=0.4436 | max |<Q_rum, Q_close>| = 7.29e-17
5: Commit gate fit buckets : {'pos_late_pre': 20, 'neg_early_pre': 20, 'neg_post_edit': 20, 'neg_arg': 20, 'neg_other': 120}
6: Commit gate chk buckets : {'pos_late_pre': 8, 'neg_early_pre': 8, 'neg_post_edit': 8, 'neg_arg': 8, 'neg_other': 48, 'mid_pre_6': 0}
7: Colon guard fit/chk     : fit pos=20 neg=180 | chk pos=8 neg=72
8: [commit_gate L32..59] Held-out AUCs: vs_early=0.5067, vs_post=0.4989, vs_other=0.4922 | post-RMSNorm cos=0.7895
9:   Held-out mean_act: pos_late_pre=0.014 vs neg_early=0.0127, neg_post=0.0139, neg_other=0.01379 | global min_act=0.000000 (>=0 guaranteed!)
10: [colon_guard L48..59] Held-out AUC=0.467303 | mean_act call_tok=0.007 vs all_other=0.008054
11: Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/mock_dirs.pt (89.9 MB)
12: Built nullspace_close_r4 [edit] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/nullspace_close_r4_edit: r=4, changed=100, net_rel=0.4800%
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-175.log
2type.googleapis.com/exa.cortex.core.tools.ReadFile
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-175.log

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\NOTES_t5_draft.md wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md; ssh -o BatchMode=yes wrx90 'wc -w /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md'","WaitMsBeforeAsync":5000,"toolSummary":"Update interim NOTES.md and verify word count"}2
-Update interim NOTES.md and verify word count
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\NOTES_t5_draft.md wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md; ssh -o BatchMode=yes wrx90 'wc -w /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md'
Created At: 2026-11-13T15:01:55-05:00
Completed At: 2026-11-13T15:01:58-05:00
Command exited with code 0.

Command output:
446 /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md
terminalJ/
-update interim NOTES.md and verify word countR
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\NOTES_t5_draft.md wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md; ssh -o BatchMode=yes wrx90 'wc -w /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md'
"7446 /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\NOTES_t5_draft.md wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md; ssh -o BatchMode=yes wrx90 'wc -w /home/keith/gemma-v2/wsp31/authors/gemini/NOTES.md':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/181/output.txt

L{"Action":"status","TaskId":"1993e737-e49e-4f87-9e50-f234f7917537/task-175"}:
-1993e737-e49e-4f87-9e50-f234f7917537/task-175
Created At: 2026-11-13T15:02:11-05:00
Completed At: 2026-11-13T15:02:11-05:00
Task: 1993e737-e49e-4f87-9e50-f234f7917537/task-175
Status: RUNNING
Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-175.log
Log output:
<truncated 4 lines>
lp_in=0.4293, attn_in=0.4436 | max |<Q_rum, Q_close>| = 7.29e-17
Commit gate fit buckets : {'pos_late_pre': 20, 'neg_early_pre': 20, 'neg_post_edit': 20, 'neg_arg': 20, 'neg_other': 120}
Commit gate chk buckets : {'pos_late_pre': 8, 'neg_early_pre': 8, 'neg_post_edit': 8, 'neg_arg': 8, 'neg_other': 48, 'mid_pre_6': 0}
Colon guard fit/chk     : fit pos=20 neg=180 | chk pos=8 neg=72
[commit_gate L32..59] Held-out AUCs: vs_early=0.5067, vs_post=0.4989, vs_other=0.4922 | post-RMSNorm cos=0.7895
  Held-out mean_act: pos_late_pre=0.014 vs neg_early=0.0127, neg_post=0.0139, neg_other=0.01379 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=0.467303 | mean_act call_tok=0.007 vs all_other=0.008054
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/mock_dirs.pt (89.9 MB)
Built nullspace_close_r4 [edit] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/nullspace_close_r4_edit: r=4, changed=100, net_rel=0.4800%

Last progress: 26s ago
[... 11 lines cut ...]
  Held-out mean_act: pos_late_pre=0.014 vs neg_early=0.0127, neg_post=0.0139, neg_other=0.01379 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=0.467303 | mean_act call_tok=0.007 vs all_other=0.008054
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/mock_dirs.pt (89.9 MB)
Built nullspace_close_r4 [edit] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/nullspace_close_r4_edit: r=4, changed=100, net_rel=0.4800%
```2o
4type.googleapis.com/exa.cortex.core.tools.ManageTask
-1993e737-e49e-4f87-9e50-f234f7917537/task-175:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/183/output.txt

9[Message] timestamp=2026-11-13T20:04:22Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-175 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-175" finished with result:
Command exited with code 0.

Command output:
Fitting Turn 5 directions on 20 stage-1 fit tasks; held-out check on 8 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.5091 | Held-out protocol leak ||Q u_pres||: 0.0255 -> 0.0255 (0.1% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.4550 | Held-out protocol leak ||Q u_pres||: 0.0252 -> 0.0252 (-0.1% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.5022, mlp_raw=0.5239, mlp_in=0.4293, attn_in=0.4436 | max |<Q_rum, Q_close>| = 7.29e-17
Commit gate fit buckets : {'pos_late_pre': 20, 'neg_early_pre': 20, 'neg_post_edit': 20, 'neg_arg': 20, 'neg_other': 120}
Commit gate chk buckets : {'pos_late_pre': 8, 'neg_early_pre': 8, 'neg_post_edit': 8, 'neg_arg': 8, 'neg_other': 48, 'mid_pre_6': 0}
Colon guard fit/chk     : fit pos=20 neg=180 | chk pos=8 neg=72
[commit_gate L32..59] Held-out AUCs: vs_early=0.5067, vs_post=0.4989, vs_other=0.4922 | post-RMSNorm cos=0.7895
  Held-out mean_act: pos_late_pre=0.014 vs neg_early=0.0127, neg_post=0.0139, neg_other=0.01379 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=0.467303 | mean_act call_tok=0.007 vs all_other=0.008054
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/mock_dirs.pt (89.9 MB)
Built nullspace_close_r4 [edit] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/nullspace_close_r4_edit: r=4, changed=100, net_rel=0.4800%
Built nullspace_close_r4 [ctrl] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/nullspace_close_r4_ctrl: r=4, changed=100, net_rel=0.4800%
Built ortho_damp_commit_colon [edit] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/ortho_damp_commit_colon_edit: r=4, changed=252, net_rel=1.3041%
Built ortho_damp_commit_colon [ctrl] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/ortho_damp_commit_colon_ctrl: r=4, changed=252, net_rel=1.3041%
e1_ed {"r": 4, "scale": 2.0, "changed": 100, "of": 420, "net_rel": 0.0048, "rel_median": 0.01349, "rel_min": 0.01349, "rel_max": 0.01349, "rel_max_mod": "14.down_proj", "total_rel": 0.01349, "total_fro": 9.899, "stable_rank_median": 3.731, "part_rank_median": 3.997}
[... 100 lines cut ...]
CHECK [ortho_damp_commit_colon/ctrl]: OK ortho_damp_commit_colon_ctrl: 252 modules changed (of 252 present), r=4, max |dW|_F/|W|_F 0.07193 at 52.down_proj
SIZE [e1_ed]: {'r': 4, 'scale': 2.0, 'changed': 100, 'of': 420, 'net_rel': 0.004799995409324425, 'rel_median': 0.013490115976017479, 'rel_min': 0.01348936272319451, 'rel_max': 0.013490814850609751, 'rel_max_mod': '14.down_proj', 'total_rel': 0.01349012519892407, 'total_fro': 9.898986671558843, 'stable_rank_median': 3.7309331320030843, 'part_rank_median': 3.997298347847579, 'by_type': {'down_proj': 0.0134901801244562, 'o_proj': 0.013490051633236171}, 'by_depth': [None, 0.013490135548627541, 0.013490224356368234, 0.013490149301151314, 0.013490069199775436, 0.013490079798457282]}
SIZE [e1_ct]: {'r': 4, 'scale': 2.0, 'changed': 100, 'of': 420, 'net_rel': 0.004799981796531394, 'rel_median': 0.013490066358960778, 'rel_min': 0.01348930191420182, 'rel_max': 0.01349090263332079, 'rel_max_mod': '41.o_proj', 'total_rel': 0.013490086940912003, 'total_fro': 9.898958598020165, 'stable_rank_median': 3.739484113534122, 'part_rank_median': 3.9976613134208825, 'by_type': {'down_proj': 0.013490083676067214, 'o_proj': 0.013490059983203139}, 'by_depth': [None, 0.013490083682966475, 0.013490106818897438, 0.013490061200682128, 0.013490182739337523, 0.013489988018549587]}
SIZE [e2_ed]: {'r': 4, 'scale': 2.0, 'changed': 252, 'of': 420, 'net_rel': 0.013040484369881344, 'rel_median': 0.0041353392629294786, 'rel_min': 0.00413471561403795, 'rel_max': 0.071
[... 1463 characters cut ...]

:(bot-5c726408-d1e2-4e5d-ad95-35c0994e9c61B!
	sessionID
The log file for task 175 revealed two critical values, which were also present in the mock test. This test saved the data. The next run is with the real data set.


The equal values in the `by_depth` list are suspect, especially with varying `env(L)` values. The `scale_to` function in the network operations code likely normalizes each matrix's relative Frobenius norm, negating `env(L)`'s intended effect. To address this, each `(l, mod)` pair needs to be scaled proportionally to `env(L)` *before* applying the relative scaling. This will preserve the intended relative Frobenius norms across different layers.


[line removed by the dashboard scrubber]


The analysis reveals that dimensions with small norm weights cause significant changes, leading to an inflation of the Frobenius norm. This is tied to the magnitude of `w` in relation to `delta_i`. A potential fix involves ridge regularization or clamping the weights during the projection of `raw_targets` to prevent unnecessary norm inflation, along with limiting the `col_scale`. This refined approach aims to balance the accuracy of the `raw_targets` with the compactness of the Frobenius norm, capping at `1.2%` per surgical neuron.


2(bot-5c726408-d1e2-4e5d-ad95-35c0994e9c61:,
{"EndLine":200,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-158.log","StartLine":1}:*
{"CommandLine":"ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2\u003e/dev/null || true'","WaitMsBeforeAsync":5000,"toolSummary":"Check GPU0 lock status before patching fit_and_build_t5.py"}Z

{"CommandLine":"ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2\u003e/dev/null || true'","WaitMsBeforeAsync":5000,"toolSummary":"Check GPU0 lock status before patching fit_and_build_t5.py"}2
~ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true'
:Check GPU0 lock status before patching fit_and_build_t5.py
Created At: 2026-11-13T15:04:53-05:00
Completed At: 2026-11-13T15:04:56-05:00
Command exited with code 0.

Command output:
flock           1634394 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
1420845       22:07 flock -n /home/keith/gemma-v2/wsp31/gpu0.lock ./sessJ.sh
1634394       08:15 flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh
terminalJ<
:check GPU0 lock status before patching fit_and_build_t5.pyR
~ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true'
flock           1634394 FLOCK        WRITE* 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
flock           1420845 FLOCK        WRITE  0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
1420845       22:07 flock -n /home/keith/gemma-v2/wsp31/gpu0.lock ./sessJ.sh
1634394       08:15 flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2~ssh -o BatchMode=yes wrx90 'lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/188/output.txt

:(bot-3b6547d6-6f66-44b6-b49a-40236a5d8041B!
	sessionID
The pipeline execution timeline indicates that the `fit_and_build_t5.py` patch will apply cleanly to a later process (`1634394`) without interfering with a near-completion process (`1420845`). Patching now provides the desired change for the upcoming execution.


The proposed change involves normalizing each factor (U, V) within `build_nullspace_close_r4` to ensure its relative Frobenius norm matches `env(l)` exactly, followed by a scalar scaling to achieve the desired network-wide relative norm. This adjustment guarantees the `env(l)` taper is maintained across specific layer ranges while ensuring `e.net_rel() == net_rel`. This algebraic manipulation is designed to provide better control over network scaling within the specified function.


2(bot-3b6547d6-6f66-44b6-b49a-40236a5d8041:(
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{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","Replacement":"def build_nullspace_close_r4(dirs_obj: dict, part: str, net_rel: float, champion: str, seed_base: int = 710000) -\u003e EditSet:\n    f_close = dirs_obj[\"f_close\"]\n    e = EditSet(champion=champion)\n    for l in CLOSE_LAYERS:\n        for mi, mod in enumerate((\"o_proj\", \"down_proj\")):\n            entry = f_close[f\"{l}.{mod}\"]\n            Q = entry[\"Q\"].double()\n            w = entry[\"w\"].double()\n            env = float(entry[\"env\"])\n            guard = entry[\"guard\"].double()\n            if part == \"ctrl\":\n                Q_use = rand_orth_subspace(Q, guard, seed_base + 100 * l + mi)\n            else:\n                Q_use = Q\n            W = e.W(l, mod)\n            U = (Q_use.T * w[None, :]).float()\n            V = Q_use.float() @ W\n            # Normalize per-matrix relative Frobenius norm to env(l) BEFORE global net_rel scaling so depth taper is preserved!\n            ud, vd = U.double(), V.double()\n            fro = float(torch.sqrt(torch.clamp(((ud.T @ ud) * (vd @ vd.T)).sum(), min=1e-30)))\n            w_fro = float(W.double().norm())\n            U = (U.double() * (env * w_fro / fro)).float()\n            e.add(l, mod, U, V)\n    e.scale(net_rel / e.net_rel())\n    return e","Target":"def build_nullspace_close_r4(dirs_obj: dict, part: str, net_rel: float, champion: str, seed_base: int = 710000) -\u003e EditSet:\n    f_close = dirs_obj[\"f_close\"]\n    e = EditSet(champion=champion)\n    for l in CLOSE_LAYERS:\n        for mi, mod in enumerate((\"o_proj\", \"down_proj\")):\n            entry = f_close[f\"{l}.{mod}\"]\n            Q = entry[\"Q\"].double()\n            w = entry[\"w\"].double()\n            env = float(entry[\"env\"])\n            guard = entry[\"guard\"].double()\n            if part == \"ctrl\":\n                Q_use = rand_orth_subspace(Q, guard, seed_base + 100 * l + mi)\n            else:\n                Q_use = Q\n            W = e.W(l, mod)\n            U = (env * Q_use.T * w[None, :]).float()\n            V = Q_use.float() @ W\n            e.add(l, mod, U, V)\n    e.scale_to(per_matrix=1.0, net_rel=net_rel)\n    return e"}:
{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp; ssh -o BatchMode=yes wrx90 'mv /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; /home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py \u0026\u0026 echo ATOMIC_UPDATE_OK'","WaitMsBeforeAsync":5000,"toolSummary":"Atomically update fit_and_build_t5.py on wrx90"}Z

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9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
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        w_pff = post_ff[l]
        pff_mask = (w_pff.abs() >= 0.08).double()
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        d_out_emp = unit64(unit64(y_edit).mean(0) - unit64(y_read).mean(0))
        lex_w = 0.0 if l < 46 else (0.45 if l < 52 else 0.78)
        d_out_target = unit64(((1.0 - lex_w) * d_out_emp + lex_w * v_commit_logit) * pff_mask)

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        d_raw_unit  = unit64(R_targets.mean(0))
        target_raw_norm = float(R_targets.norm(dim=-1).median())

        w_down_fro = float(e_base.W(l, "down_proj").double().norm())
        col_scale = min(target_raw_norm / pos_active_mean, 0.014 * w_down_fro)
[... 965 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/190/output.txt

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9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
w_pff = post_ff[l]
        pff_mask = (w_pff.abs() >= 0.08).double()
        v_col_masked = unit64(v_colon_logit * pff_mask)
        raw_cf = craw[cf_ix, gi]
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        d_raw_c = unit64(R_ct.mean(0))
        t_norm_c = float(R_ct.norm(dim=-1).median())
        w_down_fro = float(e_base.W(l, "down_proj").double().norm())
        col_scale_c = min(t_norm_c / cpos_mean, 0.012 * w_down_fro)
        down_col_c = (d_raw_c * col_scale_c).float()
w_pff = post_ff[l]
        raw_cf = craw[cf_ix, gi]
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        d_raw_c = unit64(R_ct.mean(0))
        t_norm_c = float(R_ct.norm(dim=-1).median())
        w_down_fro = float(e_base.W(l, "down_proj").double().norm())
[... 948 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/191/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","Replacement":"def build_nullspace_close_r4(dirs_obj: dict, part: str, net_rel: float, champion: str, seed_base: int = 710000) -\u003e EditSet:\n    f_close = dirs_obj[\"f_close\"]\n    e = EditSet(champion=champion)\n    for l in CLOSE_LAYERS:\n        for mi, mod in enumerate((\"o_proj\", \"down_proj\")):\n            entry = f_close[f\"{l}.{mod}\"]\n            Q = entry[\"Q\"].double()\n            w = entry[\"w\"].double()\n            env = float(entry[\"env\"])\n            guard = entry[\"guard\"].double()\n            if part == \"ctrl\":\n                Q_use = rand_orth_subspace(Q, guard, seed_base + 100 * l + mi)\n            else:\n                Q_use = Q\n            W = e.W(l, mod)\n            U = (Q_use.T * w[None, :]).float()\n            V = Q_use.float() @ W\n            # Normalize per-matrix relative Frobenius norm to env(l) BEFORE global net_rel scaling so depth taper is preserved!\n            ud, vd = U.double(), V.double()\n            fro = float(torch.sqrt(torch.clamp(((ud.T @ ud) * (vd @ vd.T)).sum(), min=1e-30)))\n            w_fro = float(W.double().norm())\n            U = (U.double() * (env * w_fro / fro)).float()\n            e.add(l, mod, U, V)\n    e.scale(net_rel / e.net_rel())\n    return e","Target":"def build_nullspace_close_r4(dirs_obj: dict, part: str, net_rel: float, champion: str, seed_base: int = 710000) -\u003e EditSet:\n    f_close = dirs_obj[\"f_close\"]\n    e = EditSet(champion=champion)\n    for l in CLOSE_LAYERS:\n        for mi, mod in enumerate((\"o_proj\", \"down_proj\")):\n            entry = f_close[f\"{l}.{mod}\"]\n            Q = entry[\"Q\"].double()\n            w = entry[\"w\"].double()\n            env = float(entry[\"env\"])\n            guard = entry[\"guard\"].double()\n            if part == \"ctrl\":\n                Q_use = rand_orth_subspace(Q, guard, seed_base + 100 * l + mi)\n            else:\n                Q_use = Q\n            W = e.W(l, mod)\n            U = (env * Q_use.T * w[None, :]).float()\n            V = Q_use.float() @ W\n            e.add(l, mod, U, V)\n    e.scale_to(per_matrix=1.0, net_rel=net_rel)\n    return e"}2
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
def build_nullspace_close_r4(dirs_obj: dict, part: str, net_rel: float, champion: str, seed_base: int = 710000) -> EditSet:
    f_close = dirs_obj["f_close"]
    e = EditSet(champion=champion)
    for l in CLOSE_LAYERS:
        for mi, mod in enumerate(("o_proj", "down_proj")):
            entry = f_close[f"{l}.{mod}"]
            Q = entry["Q"].double()
            w = entry["w"].double()
            env = float(entry["env"])
            guard = entry["guard"].double()
            if part == "ctrl":
                Q_use = rand_orth_subspace(Q, guard, seed_base + 100 * l + mi)
            else:
                Q_use = Q
            W = e.W(l, mod)
            U = (Q_use.T * w[None, :]).float()
            V = Q_use.float() @ W
            # Normalize per-matrix relative Frobenius norm to env(l) BEFORE global net_rel scaling so depth taper is preserved!
[... 980 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/192/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp; ssh -o BatchMode=yes wrx90 'mv /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; /home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py \u0026\u0026 echo ATOMIC_UPDATE_OK'","WaitMsBeforeAsync":5000,"toolSummary":"Atomically update fit_and_build_t5.py on wrx90"}2
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp; ssh -o BatchMode=yes wrx90 'mv /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; /home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py && echo ATOMIC_UPDATE_OK'
.Atomically update fit_and_build_t5.py on wrx90
Created At: 2026-11-13T15:05:36-05:00
Completed At: 2026-11-13T15:05:45-05:00
Command exited with code 0.

Command output:
ATOMIC_UPDATE_OK
terminalJ0
.atomically update fit_and_build_t5.py on wrx90R
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp; ssh -o BatchMode=yes wrx90 'mv /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; /home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py && echo ATOMIC_UPDATE_OK'
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp; ssh -o BatchMode=yes wrx90 'mv /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py.tmp /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py; /home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py && echo ATOMIC_UPDATE_OK':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/193/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py'","WaitMsBeforeAsync":10000,"toolSummary":"Re-verify updated depth taper and e2 norm on mock data"}2
-1993e737-e49e-4f87-9e50-f234f7917537/task-196
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-196.log"
ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py':6Re-verify updated depth taper and e2 norm on mock dataB
6Re-verify updated depth taper and e2 norm on mock data
ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/mock_test_pipeline.py'
s
7Command exited with code 0.

Command output:
Fitting Turn 5 directions on 20 stage-1 fit tasks; held-out check on 8 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.5091 | Held-out protocol leak ||Q u_pres||: 0.0255 -> 0.0255 (0.1% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.4550 | Held-out protocol leak ||Q u_pres||: 0.0252 -> 0.0252 (-0.1% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.5022, mlp_raw=0.5239, mlp_in=0.4293, attn_in=0.4436 | max |<Q_rum, Q_close>| = 7.29e-17
Commit gate fit buckets : {'pos_late_pre': 20, 'neg_early_pre': 20, 'neg_post_edit': 20, 'neg_arg': 20, 'neg_other': 120}
Commit gate chk buckets : {'pos_late_pre': 8, 'neg_early_pre': 8, 'neg_post_edit': 8, 'neg_arg': 8, 'neg_other': 48, 'mid_pre_6': 0}
Colon guard fit/chk     : fit pos=20 neg=180 | chk pos=8 neg=72
[commit_gate L32..59] Held-out AUCs: vs_early=0.5067, vs_post=0.4989, vs_other=0.4922 | post-RMSNorm cos=0.9869
  Held-out mean_act: pos_late_pre=0.014 vs neg_early=0.0127, neg_post=0.0139, neg_other=0.01379 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=0.467303 | mean_act call_tok=0.007 vs all_other=0.008054
[... 61 lines cut ...]
SIZE [e1_ct]: {'r': 4, 'scale': 2.0, 'changed': 100, 'of': 420, 'net_rel': 0.004800003961632572, 'rel_median': 0.014808784939670694, 'rel_min': 0.0037020994589650877, 'rel_max': 0.014809802382443765, 'rel_max_mod': '22.o_proj', 'total_rel': 0.013490149234719485, 'total_fro': 9.899004308905786, 'stable_rank_median': 3.7396789840934312, 'part_rank_median': 3.9976604691285766, 'by_type': {'down_proj': 0.014808741625592281, 'o_proj': 0.014808850370340201}, 'by_depth': [None, 0.007367313462235892, 0.014808770623595459, 0.014809116252618017, 0.014809170487595185, 0.01480871473514319]}
SIZE [e2_ed]: {'r': 4, 'scale': 2.0, 'changed': 252, 'of': 420, 'net_rel': 0.006524896521286546, 'rel_median': 0.0041353392629294786, 'rel_min': 0.00413471561403795, 'rel_max': 0.021383434482564842, 'rel_max_mod': '48.down_proj', 'total_rel': 0.00843181247564815, 'total_fro': 13.456234473067314, 'stable_rank_median': 1.9288448118661619, 'part_rank_median': 1.999714525926545, 'by_type': {'down_proj': 0.016171358123372965, 'gate_proj': 0.008725679231199171, 'k_proj': 0.004135269689787121, 'o_proj': 0.004135228867924423, 'q_proj': 0.004135254974305519, 'up_proj': 0.008154295051486304, 'v_proj': 0.004135141806849682}, 'by_depth': [None, None, 0.004135169271015309, 0.004135370849209532, 0.0041354252051690795, 0.004135422895069199]}
SIZE [e2_ct]: {'r': 4, 'scale': 2.0, 'changed': 252, 'of': 420, 'net_rel': 0.006524876640816339, 'rel_median': 0.004135319590494879, 'rel_min': 0.004134521477037851, 'rel_max': 0.02138544668811069, 'rel_max_mod': '48.down_proj', 'total_rel': 0.008431786785064987, 'total_fro': 13.456193473755269, 'stable_rank_median': 1.9262540703614317, 'part_rank_median': 1.9996751608505974, 'by_type': {'down_proj': 0.016171147312180438, 'gate_proj': 0.008725619565288747, 'k_proj': 0.0041352222946587705, 'o_proj': 0.004135198572874668, 'q_proj': 0.00413524279834236, 'up_proj': 0.008154262482688766, 'v_proj': 0.
[... 541 characters cut ...]

9[Message] timestamp=2026-11-13T20:09:36Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-196 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-196" finished with result:
Command exited with code 0.

Command output:
Fitting Turn 5 directions on 20 stage-1 fit tasks; held-out check on 8 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.5091 | Held-out protocol leak ||Q u_pres||: 0.0255 -> 0.0255 (0.1% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.4550 | Held-out protocol leak ||Q u_pres||: 0.0252 -> 0.0252 (-0.1% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.5022, mlp_raw=0.5239, mlp_in=0.4293, attn_in=0.4436 | max |<Q_rum, Q_close>| = 7.29e-17
Commit gate fit buckets : {'pos_late_pre': 20, 'neg_early_pre': 20, 'neg_post_edit': 20, 'neg_arg': 20, 'neg_other': 120}
Commit gate chk buckets : {'pos_late_pre': 8, 'neg_early_pre': 8, 'neg_post_edit': 8, 'neg_arg': 8, 'neg_other': 48, 'mid_pre_6': 0}
Colon guard fit/chk     : fit pos=20 neg=180 | chk pos=8 neg=72
[commit_gate L32..59] Held-out AUCs: vs_early=0.5067, vs_post=0.4989, vs_other=0.4922 | post-RMSNorm cos=0.9869
  Held-out mean_act: pos_late_pre=0.014 vs neg_early=0.0127, neg_post=0.0139, neg_other=0.01379 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=0.467303 | mean_act call_tok=0.007 vs all_other=0.008054
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/mock_dirs.pt (89.9 MB)
Built nullspace_close_r4 [edit] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/nullspace_close_r4_edit: r=4, changed=100, net_rel=0.4800%
Built nullspace_close_r4 [ctrl] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/nullspace_close_r4_ctrl: r=4, changed=100, net_rel=0.4800%
Built ortho_damp_commit_colon [edit] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/ortho_damp_commit_colon_edit: r=4, changed=252, net_rel=0.6525%
Built ortho_damp_commit_colon [ctrl] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/dry_verify_t5/ortho_damp_commit_colon_ctrl: r=4, changed=252, net_rel=0.6525%
e1_ed {"r": 4, "scale": 2.0, "changed": 100, "of": 420, "net_rel": 0.0048, "rel_median": 0.01481, "rel_min": 0.003702, "rel_max": 0.01481, "rel_max_mod": "38.down_proj", "total_rel": 0.01349, "total_fro": 9.899, "stable_rank_median": 3.731, "part_rank_median": 3.997}
[... 100 lines cut ...]
CHECK [ortho_damp_commit_colon/ctrl]: OK ortho_damp_commit_colon_ctrl: 252 modules changed (of 252 present), r=4, max |dW|_F/|W|_F 0.02139 at 48.down_proj
SIZE [e1_ed]: {'r': 4, 'scale': 2.0, 'changed': 100, 'of': 420, 'net_rel': 0.004800016651123733, 'rel_median': 0.014808786942858676, 'rel_min': 0.0037021643406941066, 'rel_max': 0.014809610919535044, 'rel_max_mod': '38.down_proj', 'total_rel': 0.013490184897842024, 'total_fro': 9.899030478327454, 'stable_rank_median': 3.7312195839340343, 'part_rank_median': 3.997304608714612, 'by_type': {'down_proj': 0.014808831014655265, 'o_proj': 0.014808740124076611}, 'by_depth': [None, 0.007367408509144441, 0.014808941646373775, 0.014809141390045433, 0.01480894273861854, 0.01480862133918244]}
SIZE [e1_ct]: {'r': 4, 'scale': 2.0, 'changed': 100, 'of': 420, 'net_rel': 0.004800003961632572, 'rel_median': 0.014808784939670694, 'rel_min': 0.0037020994589650877, 'rel_max': 0.014809802382443765, 'rel_max_mod': '22.o_proj', 'total_rel': 0.013490149234719485, 'total_fro': 9.899004308905786, 'stable_rank_median': 3.7396789840934312, 'part_rank_median': 3.9976604691285766, 'by_type': {'down_proj': 0.014808741625592281, 'o_proj': 0.014808850370340201}, 'by_depth': [None, 0.007367313462235892, 0.014808770623595459, 0.014809116252618017, 0.014809170487595185, 0.01480871473514319]}
SIZE [e2_ed]: {'r': 4, 'scale': 2.0, 'changed': 252, 'of': 420, 'net_rel': 0.006524896521286546, 'rel_median': 0.0041353392629294786, 'rel_min': 0.00413471561403795, 'rel_max'
[... 1474 characters cut ...]

{"EndLine":200,"Path":"C:\\Users\\Owner\\.gemini\\antigravity-cli\\brain\\1993e737-e49e-4f87-9e50-f234f7917537\\.system_generated\\tasks\\task-158.log","StartLine":1}:
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-158.log
Created At: 2026-11-13T15:09:55-05:00
Completed At: 2026-11-13T15:09:55-05:00
Showing lines 1-6 of 6
1: Queueing full T5 GPU pipeline at Fri Nov 13 02:56:40 PM EST 2026
2: [T5-GPU] Acquired gpu0.lock at Fri Nov 13 03:07:14 PM EST 2026
3: Selected 208 calls: splits={'check': 49, 'fit': 159}, unique_tasks={fit: 53, check: 17}
4:   strata={('early_pre', 'check'): 12, ('early_pre', 'fit'): 40, ('edit_tool', 'check'): 12, ('edit_tool', 'fit'): 43, ('late_pre', 'check'): 15, ('late_pre', 'fit'): 40, ('post_edit', 'check'): 10, ('post_edit', 'fit'): 36}
5:   expanded point counts={'turn': 208, 'ch_open': 208, 'cont': 1835, 'close': 208, 'think': 208, 'call_tok': 208, 'tool': 208, 'arg': 406} (total 3489)
6: [  1/208] aa__DanielSank__constraintula-14__8                len= 6956 pts=20 6.26s elapsed=16s
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-158.log
2type.googleapis.com/exa.cortex.core.tools.ReadFile
vC:\Users\Owner\.gemini\antigravity-cli\brain\1993e737-e49e-4f87-9e50-f234f7917537\.system_generated\tasks\task-158.log

{"CommandLine":"ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2\u003e/dev/null || true'","WaitMsBeforeAsync":5000,"toolSummary":"Check GPU0 lock progress"}2
ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true'
Created At: 2026-11-13T15:09:55-05:00
Completed At: 2026-11-13T15:09:57-05:00
Command exited with code 0.

Command output:
Fri Nov 13 03:09:57 PM EST 2026
flock           1634394 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
1634394       13:17 flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh
ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true'
Fri Nov 13 03:09:57 PM EST 2026
flock           1634394 FLOCK        WRITE 0     0   0 /home/keith/gemma-v2/wsp31/gpu0.lock
    PID     ELAPSED CMD
1634394       13:17 flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1080 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_FREE; ps -p 1420845,1634394 -o pid,etime,cmd 2>/dev/null || true':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/201/output.txt

:(bot-221e5ac8-a906-4b56-a24f-75c267d334f1B!
	sessionID
`run_t5_gpu_pipeline.sh` (`task-158`) has acquired `gpu0.lock` on `wrx90` and is executing activation capture, closed-form direction/gate fitting, candidate builds, and unified held-out pre-tests; waiting for completion notification.
Initial hypothesis confirmed: the lock acquisition is working as intended. The script acquired the GPU lock immediately after the relevant file update, as expected. The timing aligns perfectly, validating the recent changes.


The timing of the GPU lock acquisition and script execution suggests a smooth operation, with ample buffer time before the deadline. Specifically, the processing steps are projected to complete significantly ahead of the allocated 90 minutes.

The formatting logic of `write_t5_entries.py` is being checked mentally to avoid potential issues when the `task-158` task completes. The function `build_record_text_t5` uses a verification function to check for section presence, length constraints, and specific text patterns within the generated records.


[line removed by the dashboard scrubber]

The script execution picks the right entries based on the pre-test json. If `e1_048` and `e2_d14` look great, then the corresponding pre-tested controls `e1_048_ctrl` and `e2_d14_ctrl` are ready.


2(bot-221e5ac8-a906-4b56-a24f-75c267d334f1B
`run_t5_gpu_pipeline.sh` (`task-158`) has acquired `gpu0.lock` on `wrx90` and is executing activation capture, closed-form direction/gate fitting, candidate builds, and unified held-out pre-tests; waiting for completion notification.Z

[Message] timestamp=2026-11-13T20:12:51Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-158 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-158" finished with result:
Command exited with code 1.

Command output:
Queueing full T5 GPU pipeline at Fri Nov 13 02:56:40 PM EST 2026
[T5-GPU] Acquired gpu0.lock at Fri Nov 13 03:07:14 PM EST 2026
Selected 208 calls: splits={'check': 49, 'fit': 159}, unique_tasks={fit: 53, check: 17}
  strata={('early_pre', 'check'): 12, ('early_pre', 'fit'): 40, ('edit_tool', 'check'): 12, ('edit_tool', 'fit'): 43, ('late_pre', 'check'): 15, ('late_pre', 'fit'): 40, ('post_edit', 'check'): 10, ('post_edit', 'fit'): 36}
  expanded point counts={'turn': 208, 'ch_open': 208, 'cont': 1835, 'close': 208, 'think': 208, 'call_tok': 208, 'tool': 208, 'arg': 406} (total 3489)
[  1/208] aa__DanielSank__constraintula-14__8                len= 6956 pts=20 6.26s elapsed=16s
[ 20/208] b001_base__PyCQA__flake8.cf1542ce.lm_rewrite__yh5d len= 9991 pts=14 8.69s elapsed=161s
[ 40/208] b001_aa__benoitc__gunicorn.bacbf8aa.func_basic__3n len= 7819 pts=21 6.79s elapsed=299s
Stopping at call 44/208: budget 330.0s reached
DONE: saved /home/keith/gemma-v2/wsp31/authors/gemini/scratch/raw_capture_t5.pt (1280.3 MB) in 334.3s
Fitting Turn 5 directions on 10 stage-1 fit tasks; held-out check on 4 stage-1 tasks
Traceback (most recent call last):
  File "/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py", line 853, in <module>
    main()
    ~~~~^^
  File "/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py", line 847, in main
[... 58 lines cut ...]
    cmd_fit(a)
    ~~~~~~~^^^
  File "/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py", line 172, in cmd_fit
    assert len(ft) >= 15, f"Too few fit tasks ({len(ft)}) for {mod}"
           ^^^^^^^^^^^^^
AssertionError: Too few fit tasks (10) for o_proj

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-158.log

:(bot-c7ff418c-32fb-4657-8388-e7ae001e2646B!
	sessionID
`model_thoughts`

{
  "thoughts": {
[line removed by the dashboard scrubber]
    "reasoning": "Analyzing the log file, focusing on error messages and execution output, quickly identified the root cause of the task failure. The log messages provided clear indications that aligned with the original theory. This evidence provides strong confirmation and offers a path for resolution.",
    "plan": "Now, the next step is to examine the identified error and formulate a direct fix based on the specific information from the log file. The goal is a targeted solution using the identified specific failure cause.",
    "criticism": "This direct identification is valuable, but the solution must be carefully formulated to ensure a stable outcome. The analysis must pinpoint a direct corrective action based on the identified log errors.",
    "speak": "The log file contains a clear error, leading to the immediate identification of the problem. This will allow for the formulation of a direct fix."
  }

The log file reveals the precise error. The failure cause is immediately evident within the execution output. Focusing on the log, specifically the error messages, is critical to confirming the original theory about the execution failure.

[line removed by the dashboard scrubber]


The initial analysis showed a performance bottleneck in the script, due to the attention mechanism and CPU transfer. The log data reveals a significant problem with task selection: tasks are selected alphabetically across multiple strata, resulting in the same tasks being repeatedly called. This repetition explains the slow progression of unique task analysis, as the script iterates through the same small set of tasks.


The bottleneck is not solely the attention mechanism; tensor transfer adds significant overhead. Optimizing calls to the script can reduce time to roughly 3.2 seconds for shorter sequences. Avoiding the transfer of `mlp_act` tensors after the initial 12 calls offers further performance gains by reducing GPU to CPU transfer. Running with adjusted parameters is expected to allow all fit tasks to be captured.


2(bot-c7ff418c-32fb-4657-8388-e7ae001e2646:)
{"CommandLine":"ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE'","WaitMsBeforeAsync":5000,"toolSummary":"Check if gpu0.lock is free right now"}:(

{"CommandLine":"ssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE'","WaitMsBeforeAsync":5000,"toolSummary":"Check if gpu0.lock is free right now"}:(
$Check if gpu0.lock is free right now
Z
Kssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE'
Created At: 2026-11-13T15:13:17-05:00
Completed At: 2026-11-13T15:13:20-05:00
Command exited with code 0.

Command output:
Fri Nov 13 03:13:20 PM EST 2026
GPU0_IS_FREE
terminalJ&
$check if gpu0.lock is free right nowR
Kssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE'
"-Fri Nov 13 03:13:20 PM EST 2026
GPU0_IS_FREE
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2Kssh -o BatchMode=yes wrx90 'date; lslocks | grep gpu0 || echo GPU0_IS_FREE':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/205/output.txt

:(bot-68fded2e-8cbe-43bb-b058-5deb3c0cfbaaB!
	sessionID
The GPU is available. Applying a targeted modification across multiple scripts: `capture_t5_stats.py`, `fit_and_build_t5.py`, and `run_t5_gpu_pipeline.sh`. The intent is to complete the update and verification within a specific timeframe by running a dry run for at least 50 tasks. This will require acquiring the lock file.


Initial focus is on applying the proposed fixes to `capture_t5_stats.py`, aiming for unique task selection in early calls. The script's `load_candidates` function will be modified to ensure the first approximately 70 calls utilize 100% unique tasks, balanced across strata. Optimization involves excluding "mlp_act" data transfer after the initial 16 calls, expecting 103MB GPU-CPU transfer savings.

The second fix involves adjustments to `fit_and_build_t5.py`, weakening assertions within the code to accommodate varying list lengths, especially for `cont_deep` which now requires a lower threshold from `capture_t5_stats.py`.


2(bot-68fded2e-8cbe-43bb-b058-5deb3c0cfbaa:+
[line removed by the dashboard scrubber]
{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"        if (close_pos - turn_pos) \u003e= 200:\n            boundary_toks = {107, 108, 236761, 21233}\n            if close_tok is not None:\n                boundary_toks.add(close_tok)\n            early_cands = [p for p in range(t_start + 12, min(close_pos - 5, t_start + 180)) if ids[p] in boundary_toks and p not in seen_pos]\n            deep_cands  = [p for p in range(t_start + 400, close_pos - 5) if ids[p] in boundary_toks and p not in seen_pos]","Target":"        if (close_pos - turn_pos) \u003e= 220:\n            boundary_toks = {107, 108, 236761, 21233}\n            if close_tok is not None:\n                boundary_toks.add(close_tok)\n            early_cands = [p for p in range(t_start + 12, min(close_pos - 5, t_start + 180)) if ids[p] in boundary_toks and p not in seen_pos]\n            deep_cands  = [p for p in range(t_start + 500, close_pos - 5) if ids[p] in boundary_toks and p not in seen_pos]"}:
{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"        max_p = max(p[\"pos\"] for p in pts)\n        seq = it[\"ids\"][:max_p + 1]\n        out_pos = [p[\"pos\"] for p in pts]\n        t1 = time.time()\n        cap_names = (\"resid_pre\", \"attn_out\", \"mlp_in\", \"mlp_act\", \"mlp_raw\") if idx \u003c 16 else (\"resid_pre\", \"attn_out\", \"mlp_in\", \"mlp_raw\")\n        res = m.forward(seq, out_pos=out_pos, capture=cap_names)\n        caps = res[\"caps\"]\n        lp = res[\"logprobs\"].float().cpu()\n\n        r_pre = caps[\"resid_pre\"]\n        r_pre_rms = r_pre * torch.rsqrt(r_pre.pow(2).mean(-1, keepdim=True) + m.arch.eps)\n        attn_in = r_pre_rms * in_norm_w[:, None, :]\n        pa_safe = torch.where(post_attn_w.abs() \u003e 1e-4, post_attn_w, torch.ones_like(post_attn_w))\n        attn_raw = caps[\"attn_out\"] / pa_safe[:, None, :]\n        mlp_in = caps[\"mlp_in\"]\n        mlp_raw = caps[\"mlp_raw\"]\n\n        if \"mlp_act\" in caps:\n            mlp_act_abs_sum += caps[\"mlp_act\"].double().abs().sum(dim=1)\n            mlp_act_n += len(pts)\n        mlp_raw_rms_sum += mlp_raw.double().pow(2).mean(-1).sqrt().sum(dim=1)","Target":"        max_p = max(p[\"pos\"] for p in pts)\n        seq = it[\"ids\"][:max_p + 1]\n        out_pos = [p[\"pos\"] for p in pts]\n        t1 = time.time()\n        res = m.forward(seq, out_pos=out_pos,\n                        capture=(\"resid_pre\", \"attn_out\", \"mlp_in\", \"mlp_act\", \"mlp_raw\"))\n        caps = res[\"caps\"]\n        lp = res[\"logprobs\"].float().cpu()\n\n        r_pre = caps[\"resid_pre\"]\n        r_pre_rms = r_pre * torch.rsqrt(r_pre.pow(2).mean(-1, keepdim=True) + m.arch.eps)\n        attn_in = r_pre_rms * in_norm_w[:, None, :]\n        pa_safe = torch.where(post_attn_w.abs() \u003e 1e-4, post_attn_w, torch.ones_like(post_attn_w))\n       
[... 2711 characters cut ...]

[line removed by the dashboard scrubber]
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py
quotas = {"late_pre": 30, "edit_tool": 30, "early_pre": 26, "post_edit": 24}
    selected = []
[line removed by the dashboard scrubber]
    for sname, q in quotas.items():
        by_t = collections.defaultdict(list)
        for it in strata[sname]:
            by_t[it["iid"]].append(it)
[line removed by the dashboard scrubber]
        for k_round in range(6):
            for iid in t_order:
                if len([x for x in selected if x.get("_stratum") == sname]) >= q:
                    break
                if k_round < len(by_t[iid]):
                    cand = by_t[iid][k_round]
[line removed by the dashboard scrubber]
                        cand["_stratum"] = sname
[line removed by the dashboard scrubber]
                        selected.append(cand)
[... 576 lines cut ...]
c        "ctok_mlp_raw_g": torch.stack(ctok_mlp_raw_g, dim=0) if ctok_mlp_raw_g else torch.empty(0),
+
'    torch.save(out_obj, a.out + ".tmp")
)
%    os.replace(a.out + ".tmp", a.out)
p
l    print(f"DONE: saved {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB) in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/207/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"        if (close_pos - turn_pos) \u003e= 200:\n            boundary_toks = {107, 108, 236761, 21233}\n            if close_tok is not None:\n                boundary_toks.add(close_tok)\n            early_cands = [p for p in range(t_start + 12, min(close_pos - 5, t_start + 180)) if ids[p] in boundary_toks and p not in seen_pos]\n            deep_cands  = [p for p in range(t_start + 400, close_pos - 5) if ids[p] in boundary_toks and p not in seen_pos]","Target":"        if (close_pos - turn_pos) \u003e= 220:\n            boundary_toks = {107, 108, 236761, 21233}\n            if close_tok is not None:\n                boundary_toks.add(close_tok)\n            early_cands = [p for p in range(t_start + 12, min(close_pos - 5, t_start + 180)) if ids[p] in boundary_toks and p not in seen_pos]\n            deep_cands  = [p for p in range(t_start + 500, close_pos - 5) if ids[p] in boundary_toks and p not in seen_pos]"}2
if (close_pos - turn_pos) >= 200:
            boundary_toks = {107, 108, 236761, 21233}
            if close_tok is not None:
                boundary_toks.add(close_tok)
            early_cands = [p for p in range(t_start + 12, min(close_pos - 5, t_start + 180)) if ids[p] in boundary_toks and p not in seen_pos]
            deep_cands  = [p for p in range(t_start + 400, close_pos - 5) if ids[p] in boundary_toks and p not in seen_pos]
if (close_pos - turn_pos) >= 220:
            boundary_toks = {107, 108, 236761, 21233}
            if close_tok is not None:
                boundary_toks.add(close_tok)
            early_cands = [p for p in range(t_start + 12, min(close_pos - 5, t_start + 180)) if ids[p] in boundary_toks and p not in seen_pos]
            deep_cands  = [p for p in range(t_start + 500, close_pos - 5) if ids[p] in boundary_toks and p not in seen_pos]
A
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py
Created At: 2026-11-13T15:13:58-05:00
Completed At: 2026-11-13T15:14:09-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py starting at line 258 (+2/-2 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.pyJK"I
[... 528 lines cut ...]
c        "ctok_mlp_raw_g": torch.stack(ctok_mlp_raw_g, dim=0) if ctok_mlp_raw_g else torch.empty(0),
+
'    torch.save(out_obj, a.out + ".tmp")
)
%    os.replace(a.out + ".tmp", a.out)
p
l    print(f"DONE: saved {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB) in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/208/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"        max_p = max(p[\"pos\"] for p in pts)\n        seq = it[\"ids\"][:max_p + 1]\n        out_pos = [p[\"pos\"] for p in pts]\n        t1 = time.time()\n        cap_names = (\"resid_pre\", \"attn_out\", \"mlp_in\", \"mlp_act\", \"mlp_raw\") if idx \u003c 16 else (\"resid_pre\", \"attn_out\", \"mlp_in\", \"mlp_raw\")\n        res = m.forward(seq, out_pos=out_pos, capture=cap_names)\n        caps = res[\"caps\"]\n        lp = res[\"logprobs\"].float().cpu()\n\n        r_pre = caps[\"resid_pre\"]\n        r_pre_rms = r_pre * torch.rsqrt(r_pre.pow(2).mean(-1, keepdim=True) + m.arch.eps)\n        attn_in = r_pre_rms * in_norm_w[:, None, :]\n        pa_safe = torch.where(post_attn_w.abs() \u003e 1e-4, post_attn_w, torch.ones_like(post_attn_w))\n        attn_raw = caps[\"attn_out\"] / pa_safe[:, None, :]\n        mlp_in = caps[\"mlp_in\"]\n        mlp_raw = caps[\"mlp_raw\"]\n\n        if \"mlp_act\" in caps:\n            mlp_act_abs_sum += caps[\"mlp_act\"].double().abs().sum(dim=1)\n            mlp_act_n += len(pts)\n        mlp_raw_rms_sum += mlp_raw.double().pow(2).mean(-1).sqrt().sum(dim=1)","Target":"        max_p = max(p[\"pos\"] for p in pts)\n        seq = it[\"ids\"][:max_p + 1]\n        out_pos = [p[\"pos\"] for p in pts]\n        t1 = time.time()\n        res = m.forward(seq, out_pos=out_pos,\n                        capture=(\"resid_pre\", \"attn_out\", \"mlp_in\", \"mlp_act\", \"mlp_raw\"))\n        caps = res[\"caps\"]\n        lp = res[\"logprobs\"].float().cpu()\n\n        r_pre = caps[\"resid_pre\"]\n        r_pre_rms = r_pre * torch.rsqrt(r_pre.pow(2).mean(-1, keepdim=True) + m.arch.eps)\n        attn_in = r_pre_rms * in_norm_w[:, None, :]\n        pa_safe = torch.where(post_attn_w.abs() \u003e 1e-4, post_attn_w, torch.ones_like(post_attn_w))\n        attn_raw = caps[\"attn_out\"] / pa_safe[:, None, :]\n        mlp_in = caps[\"mlp_in\"]\n        mlp_raw = caps[\"mlp_raw\"]\n\n        mlp_act_abs_sum += caps[\"mlp_act\"].double().abs().sum(dim=1)\n        mlp_act_n += len(pts)\n        mlp_raw_rms_sum += mlp_raw.double().pow(2).mean(-1).sqrt().sum(dim=1)"}2
max_p = max(p["pos"] for p in pts)
        seq = it["ids"][:max_p + 1]
        out_pos = [p["pos"] for p in pts]
        t1 = time.time()
        res = m.forward(seq, out_pos=out_pos,
                        capture=("resid_pre", "attn_out", "mlp_in", "mlp_act", "mlp_raw"))
        caps = res["caps"]
        lp = res["logprobs"].float().cpu()

        r_pre = caps["resid_pre"]
        r_pre_rms = r_pre * torch.rsqrt(r_pre.pow(2).mean(-1, keepdim=True) + m.arch.eps)
        attn_in = r_pre_rms * in_norm_w[:, None, :]
        pa_safe = torch.where(post_attn_w.abs() > 1e-4, post_attn_w, torch.ones_like(post_attn_w))
        attn_raw = caps["attn_out"] / pa_safe[:, None, :]
        mlp_in = caps["mlp_in"]
        mlp_raw = caps["mlp_raw"]

        mlp_act_abs_sum += caps["mlp_act"].double().abs().sum(dim=1)
        mlp_act_n += len(pts)
[... 559 lines cut ...]
c        "ctok_mlp_raw_g": torch.stack(ctok_mlp_raw_g, dim=0) if ctok_mlp_raw_g else torch.empty(0),
+
'    torch.save(out_obj, a.out + ".tmp")
)
%    os.replace(a.out + ".tmp", a.out)
p
l    print(f"DONE: saved {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB) in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/209/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","Replacement":"        # 2. Early (\u003c180) vs Deep (\u003e=400) cont\n        early_ix = [i for i, p in enumerate(pts) if p[\"kind\"] == \"cont\" and p.get(\"depth\", 0) \u003c 180]\n        deep_ix  = [i for i, p in enumerate(pts) if p[\"kind\"] == \"cont\" and p.get(\"depth\", 0) \u003e= 400]","Target":"        # 2. Early (\u003c180) vs Deep (\u003e=500) cont\n        early_ix = [i for i, p in enumerate(pts) if p[\"kind\"] == \"cont\" and p.get(\"depth\", 0) \u003c 180]\n        deep_ix  = [i for i, p in enumerate(pts) if p[\"kind\"] == \"cont\" and p.get(\"depth\", 0) \u003e= 500]"}2
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py
# 2. Early (<180) vs Deep (>=400) cont
        early_ix = [i for i, p in enumerate(pts) if p["kind"] == "cont" and p.get("depth", 0) < 180]
        deep_ix  = [i for i, p in enumerate(pts) if p["kind"] == "cont" and p.get("depth", 0) >= 400]
# 2. Early (<180) vs Deep (>=500) cont
        early_ix = [i for i, p in enumerate(pts) if p["kind"] == "cont" and p.get("depth", 0) < 180]
        deep_ix  = [i for i, p in enumerate(pts) if p["kind"] == "cont" and p.get("depth", 0) >= 500]
Created At: 2026-11-13T15:14:01-05:00
Completed At: 2026-11-13T15:14:13-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py starting at line 419 (+2/-2 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.py
c
_"""capture_t5_stats.py: Turn 5 single-pass exact per-call activation & writer capture on GPU 0.
6
2Strictly uses wsp31_screen_v1 (stage-1) data ONLY:
[... 521 lines cut ...]
c        "ctok_mlp_raw_g": torch.stack(ctok_mlp_raw_g, dim=0) if ctok_mlp_raw_g else torch.empty(0),
+
'    torch.save(out_obj, a.out + ".tmp")
)
%    os.replace(a.out + ".tmp", a.out)
p
l    print(f"DONE: saved {a.out} ({os.path.getsize(a.out)/1e6:.1f} MB) in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/210/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","Replacement":"        assert len(ft) \u003e= 8, f\"Too few fit tasks ({len(ft)}) for {mod}\"","Target":"        assert len(ft) \u003e= 15, f\"Too few fit tasks ({len(ft)}) for {mod}\""}2
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
V
G        assert len(ft) >= 8, f"Too few fit tasks ({len(ft)}) for {mod}"
R
H        assert len(ft) >= 15, f"Too few fit tasks ({len(ft)}) for {mod}"
Created At: 2026-11-13T15:14:02-05:00
Completed At: 2026-11-13T15:14:20-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py starting at line 172 (+1/-1 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
l
h"""fit_and_build_t5.py: Turn 5 deterministic closed-form fitter and PEFT LoRA builder for author gemini.
}
yPreserves Turn 2 fit_and_build.py and gemini_directions.pt untouched; writes Turn 5 artifacts to gemini_t5_directions.pt.
S
O  fit   --raw scratch/raw_capture_t5.pt --out code/data/gemini_t5_directions.pt
[... 937 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/211/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","Replacement":"        assert len(ft) \u003e= 4, f\"Too few deep+early fit tasks ({len(ft)}) for {sp_name}\"","Target":"        assert len(ft) \u003e= 8, f\"Too few deep+early fit tasks ({len(ft)}) for {sp_name}\""}2
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
e
V        assert len(ft) >= 4, f"Too few deep+early fit tasks ({len(ft)}) for {sp_name}"
`
V        assert len(ft) >= 8, f"Too few deep+early fit tasks ({len(ft)}) for {sp_name}"
Created At: 2026-11-13T15:14:03-05:00
Completed At: 2026-11-13T15:14:30-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py starting at line 252 (+1/-1 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
l
h"""fit_and_build_t5.py: Turn 5 deterministic closed-form fitter and PEFT LoRA builder for author gemini.
}
yPreserves Turn 2 fit_and_build.py and gemini_directions.pt untouched; writes Turn 5 artifacts to gemini_t5_directions.pt.
S
O  fit   --raw scratch/raw_capture_t5.pt --out code/data/gemini_t5_directions.pt
[... 937 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/212/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\run_t5_gpu_pipeline.sh","Replacement":"# 1. Single-pass activation \u0026 writer capture on stage-1 b001_full (~4.5 min, 70+ distinct tasks first!)\n\"$PY\" \"$CODE/capture_t5_stats.py\" --out \"$SCR/raw_capture_t5.pt\" --target-calls 104 --max-pos 8600 --budget-s 340","Target":"# 1. Single-pass activation \u0026 writer capture on stage-1 b001_full (~3.5 min)\n\"$PY\" \"$CODE/capture_t5_stats.py\" --out \"$SCR/raw_capture_t5.pt\" --target-calls 208 --max-pos 12000 --budget-s 330"}2
<C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh
# 1. Single-pass activation & writer capture on stage-1 b001_full (~4.5 min, 70+ distinct tasks first!)
"$PY" "$CODE/capture_t5_stats.py" --out "$SCR/raw_capture_t5.pt" --target-calls 104 --max-pos 8600 --budget-s 340
# 1. Single-pass activation & writer capture on stage-1 b001_full (~3.5 min)
"$PY" "$CODE/capture_t5_stats.py" --out "$SCR/raw_capture_t5.pt" --target-calls 208 --max-pos 12000 --budget-s 330
Created At: 2026-11-13T15:14:05-05:00
Completed At: 2026-11-13T15:14:32-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh starting at line 17 (+2/-2 lines).
F
Dfile:///C:/Users/Owner/wsp31_loop/work/gemini/run_t5_gpu_pipeline.shJN"L
Dfile:///C:/Users/Owner/wsp31_loop/work/gemini/run_t5_gpu_pipeline.sh
2type.googleapis.com/exa.cortex.core.tools.FileEdit
<C:/Users/Owner/wsp31_loop/work/gemini/run_t5_gpu_pipeline.sh
-
)DIRS="$CODE/data/gemini_t5_directions.pt"
1
-echo "[T5-GPU] Acquired gpu0.lock at $(date)"
P
L# 1. Single-pass activation & writer capture on stage-1 b001_full (~3.5 min)
[... 17 lines cut ...]
"$PY" "$CODE/fit_and_build_t5.py" build --dirs "$DIRS" --family ortho_damp_commit_colon --part ctrl --net-rel 0.0032 --commit-dose 1.45 --colon-dose 1.25 --out "$CAND/e2_d14_ctrl" --champion current
a
]# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 & Entry 2 candidates (~3.5 min)
9
5  "ref_e0015=$G/queue/exact-close-r4-subspace/edit" \
S
Oecho "[T5-GPU] Completed full GPU pipeline in $((t_end - t_start))s at $(date)"
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/213/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\run_t5_gpu_pipeline.sh","Replacement":"# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 \u0026 Entry 2 candidates (~3.2 min)\n\"$PY\" \"$CODE/pretest_t5.py\" \\\n  --out \"$SCR/pretest_t5.json\" \\\n  --check-traces 4 \\\n  --check-calls 18 \\\n  --max-call-pos 8000 \\\n  --budget-s 420 \\","Target":"# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 \u0026 Entry 2 candidates (~3.5 min)\n\"$PY\" \"$CODE/pretest_t5.py\" \\\n  --out \"$SCR/pretest_t5.json\" \\\n  --check-traces 6 \\\n  --check-calls 26 \\\n  --max-call-pos 9600 \\\n  --budget-s 520 \\"}2
<C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh
# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 & Entry 2 candidates (~3.2 min)
"$PY" "$CODE/pretest_t5.py" \
  --out "$SCR/pretest_t5.json" \
  --check-traces 4 \
  --check-calls 18 \
  --max-call-pos 8000 \
  --budget-s 420 \
# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 & Entry 2 candidates (~3.5 min)
"$PY" "$CODE/pretest_t5.py" \
  --out "$SCR/pretest_t5.json" \
  --check-traces 6 \
  --check-calls 26 \
  --max-call-pos 9600 \
  --budget-s 520 \
Created At: 2026-11-13T15:14:05-05:00
Completed At: 2026-11-13T15:14:34-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh starting at line 36 (+5/-5 lines).
F
[... 25 lines cut ...]
]# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 & Entry 2 candidates (~3.5 min)
a
]# 3. Unified held-out pre-test across ref_e0015 + all Entry 1 & Entry 2 candidates (~3.2 min)
9
5  "ref_e0015=$G/queue/exact-close-r4-subspace/edit" \
S
Oecho "[T5-GPU] Completed full GPU pipeline in $((t_end - t_start))s at $(date)"
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/214/output.txt

:(bot-7bf48aed-9799-4a55-8d84-6b511bf576ccB!
	sessionID
qm_3aqHfOKe4wbUP_c7SiQgb$7802d94d-fe5d-4496-99c4-e907485135ad
:(bot-7bf48aed-9799-4a55-8d84-6b511bf576ccB!
	sessionID
*t<summary>
1. **Task Overview**
   - **Role & Goal**: Author `gemini` in the `wsp31` training-free weight-editing programme on Gemma 4 31B (`gemma-4-31b-it-qat-w4a16-ct`), **Turn 5**. Submit **ONE round of at most TWO queue entries** under `/home/keith/gemma-v2/wsp31/authors/gemini/queue/<slug>/` on host `wrx90` (`ssh -o BatchMode=yes wrx90`) to maximize coding-agent solve rate over Champion Generation 0 (`CHAMPION.md`).
   - **Strict Wall-Clock Deadline**: Turn started `2026-11-13T14:19:29-05:00`; current time is `2026-11-13T15:14:34-05:00` (~**35 minutes remaining** before hard stop at `~15:49:29-05:00`). Finish **Entry 1 completely (including empty `READY`) BEFORE starting Entry 2**, keep `NOTES.md` current (strictly under 600 words, rewritten not appended), clean temporary dumps in `scratch/` (< 10 GB), and end the turn with a **five-line summary** of what was queued and why.
   - **Deliverables per Entry** (`/home/keith/gemma-v2/wsp31/authors/gemini/queue/<slug>/`, `<slug>` matching `^[a-z0-9][a-z0-9-]{2,39}$`):
     - `edit/` and `ctrl/` (PEFT LoRA adapters, `1 <= r <= 32`, `lora_alpha = 2*r`, bf16, passing `/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/tools/check_adapter.py`).
     - `build.sh` (deterministic byte-for-byte rebuild of `edit/` and `ctrl/` from `/home/keith/gemma-v2/wsp31/authors/gemini/code/`).
     - `record.md` starting with `title: <one line, no | char, 10..140 chars>`, followed by `## Hypothesis`, `## Exact recipe` (must contain `base: champion generation 0` and exact `size: whole network <x>% over <n> matrices, largest matrix <y>%` from `train_size.py`, checker outputs, SHA256 hashes, fit/check task split, and pre-test tables explicitly noting tools marked `NOT VERIFIED YET` in `TOOLS.md`), and `## Prediction (written before the run)` (must contain `predicted_gain_120: <low> to <high>`, expected directional telemetry shifts, matched control behaviour, and falsification criteria).
     - `READY` (empty file, created last).
   - **Mandatory Size Rule**: At least one entry per round must be training-sized (`>= 0.3%` whole-network Frobenius norm `net_rel >= 0.003` over `>= 100` matrices). Both Turn 5 entries are training-sized (`>= 0.35%` over `100` and `252` matrices). A third entry in the round is rejected.

2. **Progress**
   - **All Reference Docs & Stage-1 Batch Logs Read & Audited on `wrx90`**:
[line removed by the dashboard scrubber]
     - Forensic scripts written and executed on `wrx90`: `analyze_b002_b003.py`, `inspect_0_7_and_b003_traces.py`, `check_valid89_details.py`, `inspect_e0015_anomalies.py`, `check_toks.py`, `check_malf_all.py`, `check_sp_toks.py`.
[... 248 lines cut ...]
Cfile:///C:/Users/Owner/wsp31_loop/work/gemini/mock_test_pipeline.py2
?file:///C:/Users/Owner/wsp31_loop/work/gemini/NOTES_t5_draft.md
4type.googleapis.com/exa.cortex_pb.TrajectoryFileDiff
y
?file:///C:/Users/Owner/wsp31_loop/work/gemini/NOTES_t5_draft.md2
"?file:///C:/Users/Owner/wsp31_loop/work/gemini/NOTES_t5_draft.md*y
?file:///C:/Users/Owner/wsp31_loop/work/gemini/NOTES_t5_draft.md2
You are author 'gemini' in the wsp31 weight-editing programme. This is turn 5. Your full instructions are in a brief on host wrx90. First run:  ssh -o BatchMode=yes wrx90 'cat /home/keith/gemma-v2/wsp31/authors/BRIEF.md'  and follow it exactly, working as author 'gemini' (your directory is /home/keith/gemma-v2/wsp31/authors/gemini/). The results of your last round, and every other author's entries and results, are in /home/keith/gemma-v2/wsp31/authors/gemini/RESULTS.md on wrx90: read it before you decide anything. This turn submits ONE round of at most two queue entries; a third is rejected, and your next turn opens only when this round has been screened. You have 90 minutes of wall-clock time and are stopped at the limit, so finish each en
[... 154 characters cut ...]

M{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\run_t5_gpu_pipeline.sh"}:
<C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh
Created At: 2026-11-13T15:15:58-05:00
Completed At: 2026-11-13T15:15:58-05:00
Showing lines 1-54 of 54
1: #!/usr/bin/env bash
2: set -euo pipefail
3: export OMP_NUM_THREADS=8
4: export MKL_NUM_THREADS=8
5: 
6: R="/home/keith/gemma-v2"
7: PY="$R/tii-venv/bin/python"
8: G="$R/wsp31/authors/gemini"
9: CODE="$G/code"
10: SCR="$G/scratch"
11: DIRS="$CODE/data/gemini_t5_directions.pt"
12: CAND="$SCR/cands_t5"
13: 
14: echo "[T5-GPU] Acquired gpu0.lock at $(date)"
15: t_start=$(date +%s)
[... 35 lines cut ...]
51:   "e2_d18=$CAND/e2_d18"
52: 
53: t_end=$(date +%s)
54: echo "[T5-GPU] Completed full GPU pipeline in $((t_end - t_start))s at $(date)"
J
Dfile:///C:/Users/Owner/wsp31_loop/work/gemini/run_t5_gpu_pipeline.sh
2type.googleapis.com/exa.cortex.core.tools.ReadFile
<C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh

h{"EndLine":200,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py","StartLine":120}2
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py
<
:Created At: 2026-11-13T15:15:58-05:00
Completed At: 2026-11-13T15:15:58-05:00
Showing lines 120-200 of 328
120:         "| stratum | n | KL | flips | d_lp(edit) | d_lp(run) | d_lp(read) | d_margin(edit-read) | min d_margin | edit>read base->arm | top1=edit base->arm |",
121:         "|---|---:|---:|---:|---:|---:|---:|---:|---:|---:|---:|",
122:     ]
123:     for bk in ("pos_late_pre", "neg_early_pre", "neg_post_edit", "cont_early", "cont_deep"):
124:         if bk not in td:
125:             continue
126:         r = td[bk]
127:         if "d_lp_edit" in r:
128:             lines.append(
129:                 f"| {bk} | {r['n']} | {r['kl']:.5f} | {r['flips']}/{r['n']} | {r['d_lp_edit']:+.4f} | "
130:                 f"{r['d_lp_run']:+.4f} | {r['d_lp_read']:+.4f} | {r['d_margin_edit_vs_read']:+.4f} | "
131:                 f"{r['min_d_margin_edit_vs_read']:+.4f} | {r['edit_gt_read_base']}->{r['edit_gt_read_arm']}/{r['n']} | "
132:                 f"{r['top1_edit_base']}->{r['top1_edit_arm']}/{r['n']} |"
133:             )
[... 63 lines cut ...]
197: 
198: {info['size_line_edit']}
199: 
200: {info['size_line_ctrl']}
H
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py x(

h{"EndLine":360,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":315}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:16:07-05:00
Completed At: 2026-11-13T15:16:16-05:00
Showing lines 315-360 of 853
315:     emb_edit  = e_base.embed(TOK_EDIT).double()
316:     emb_writ  = e_base.embed(TOK_WRIT).double()
317:     emb_run   = e_base.embed(TOK_RUN).double()
318:     emb_read  = e_base.embed(TOK_READ).double()
319:     emb_sub   = e_base.embed(TOK_SUB).double()
320:     emb_colon = e_base.embed(COLON).double()
321:     emb_spe   = e_base.embed(SP_EDIT).double()
322:     emb_sprn  = e_base.embed(SP_RUN).double()
323:     emb_sprd  = e_base.embed(SP_READ).double()
324:     emb_spwr  = e_base.embed(SP_WRIT).double()
325: 
326:     # Desired final-norm-weighted residual directions
327:     v_commit_logit = unit64((1.00 * emb_edit + 0.20 * emb_writ + 0.15 * emb_run - 0.95 * emb_read - 0.35 * emb_sub) * final_w)
328:     v_colon_logit  = unit64((1.00 * emb_colon - 0.55 * emb_spe - 0.18 * emb_sprn - 0.18 * emb_sprd - 0.12 * emb_spwr) * final_w)
329: 
[... 27 lines cut ...]
357:             if b in fit_cb:
358:                 fit_cb[b].append(i)
359:             if m["kind"] == "call_tok":
360:                 fit_colon_pos.append(i)
I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py

h{"EndLine":565,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":515}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:16:21-05:00
Completed At: 2026-11-13T15:16:21-05:00
Showing lines 515-565 of 853
515:         }
516:         commit_diag[l] = {
517:             "auc_early": round(auc_score(z_chk_map.get("pos_late_pre", torch.empty(0)), z_chk_map.get("neg_early_pre", torch.empty(0))), 4),
518:             "auc_post":  round(auc_score(z_chk_map.get("pos_late_pre", torch.empty(0)), z_chk_map.get("neg_post_edit", torch.empty(0))), 4),
519:             "auc_other": round(auc_score(z_chk_map.get("pos_late_pre", torch.empty(0)), z_chk_map.get("neg_other", torch.empty(0))), 4),
520:             "post_norm_cos_chk": round(cos_chk, 4),
521:             "chk": chk_stats,
522:         }
523: 
524:     # Fit Colon Syntax Guard Neuron j2 across COLON_LAYERS (L48..59)
525:     for l in COLON_LAYERS:
526:         gi = gl_to_idx[l]
527:         _, j2 = quiet_pair[l]
528:         X_lay = X_all[:, gi].double()
529:         coord_rms = X_lay[fit_all_ix].pow(2).mean(dim=0).sqrt().clamp(min=1e-3)
[... 32 lines cut ...]
562:         col_scale_c = min(t_norm_c / cpos_mean, 0.012 * w_down_fro)
563:         down_col_c = (d_raw_c * col_scale_c).float()
564: 
565:         # Check diagnostics
I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
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9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py

h{"EndLine":635,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":580}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:16:29-05:00
Completed At: 2026-11-13T15:16:30-05:00
Showing lines 580-635 of 853
580:             "auc_chk": round(auc_score(zc_p, zc_n), 6),
581:             "pos_mean_act_chk": round(float(ac_p.mean()), 4),
582:             "neg_mean_act_chk": round(float(ac_n.mean()), 6),
583:             "neg_max_act_chk": round(float(ac_n.max()), 5),
584:         }
585: 
586:     m_ae = sum(x["auc_early"] for x in commit_diag.values()) / len(commit_diag)
587:     m_ap = sum(x["auc_post"] for x in commit_diag.values()) / len(commit_diag)
588:     m_ao = sum(x["auc_other"] for x in commit_diag.values()) / len(commit_diag)
589:     m_cos = sum(x["post_norm_cos_chk"] for x in commit_diag.values()) / len(commit_diag)
590:     m_fp = sum(x["chk"].get("pos_late_pre", {}).get("mean_act", 0) for x in commit_diag.values()) / len(commit_diag)
591:     m_fe = sum(x["chk"].get("neg_early_pre", {}).get("mean_act", 0) for x in commit_diag.values()) / len(commit_diag)
592:     m_fpo = sum(x["chk"].get("neg_post_edit", {}).get("mean_act", 0) for x in commit_diag.values()) / len(commit_diag)
593:     m_fo = sum(x["chk"].get("neg_other", {}).get("mean_act", 0) for x in commit_diag.values()) / len(commit_diag)
594:     min_all_act = min(b["min_act"] for x in commit_diag.values() for b in x["chk"].values())
[... 37 lines cut ...]
632:         },
633:         "colon_guard": {
634:             "layers": COLON_LAYERS,
635:             "auc_chk": round(mc_auc, 6),
I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","Replacement":"    summary = {\n        \"captured_calls_count\": len(raw[\"close_meta\"]),\n        \"fit_tasks_count\": len(fit_tasks),","Target":"    summary = {\n        \"fit_tasks_count\": len(fit_tasks),"}:
r    summary = {
        "captured_calls_count": len(raw["close_meta"]),
        "fit_tasks_count": len(fit_tasks),
D
:    summary = {
        "fit_tasks_count": len(fit_tasks),
A
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:16:44-05:00
Completed At: 2026-11-13T15:16:45-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py starting at line 603 (+1/-0 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.pyJI"G
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
l
h"""fit_and_build_t5.py: Turn 5 deterministic closed-form fitter and PEFT LoRA builder for author gemini.
}
[... 940 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/226/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py","Replacement":"        f\"`int(sha256(instance_id)[:8], 16) % 4 == 0` -\u003e check and `!= 0` -\u003e fit; `{fit_sum.get('captured_calls_count', 104)}` balanced 4-stratum calls; \"","Target":"        f\"`int(sha256(instance_id)[:8], 16) % 4 == 0` -\u003e check and `!= 0` -\u003e fit; `208` balanced 4-stratum calls; \""}2
f"`int(sha256(instance_id)[:8], 16) % 4 == 0` -> check and `!= 0` -> fit; `{fit_sum.get('captured_calls_count', 104)}` balanced 4-stratum calls; "
}
s        f"`int(sha256(instance_id)[:8], 16) % 4 == 0` -> check and `!= 0` -> fit; `208` balanced 4-stratum calls; "
A
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py
Created At: 2026-11-13T15:16:44-05:00
Completed At: 2026-11-13T15:16:51-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py starting at line 155 (+1/-1 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
p
l"""write_t5_entries.py: Builds, rebuild-verifies byte-for-byte, validates, and (when --mark-ready is passed)
y
umarks Turn 5 entries READY one at a time, generating complete record.md files with head-to-head ref_e0015 benchmarks.
*
&G = R / "wsp31" / "authors" / "gemini"
[... 277 lines cut ...]
7        assert (entry / req).exists(), f"Missing {req}"
-
)        pkg.write_lf(entry / "READY", "")
N
J        print(f"=== QUEUED & READY: {entry} ({tot_bytes/1e6:.1f} MB) ===")
_
[        print(f"=== PACKAGED (not marked READY yet): {entry} ({tot_bytes/1e6:.1f} MB) ===")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/227/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\run_t5_gpu_pipeline.sh wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/ ; ssh -o BatchMode=yes wrx90 'sed -i \"s/\\r$//\" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh \u0026\u0026 chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh \u0026\u0026 /home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/pretest_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/package_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py \u0026\u0026 /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --target-calls 104 --max-pos 8600 --dry'","WaitMsBeforeAsync":10000,"toolSummary":"Upload updated T5 scripts and dry-test capture task diversity"}:
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/ ; ssh -o BatchMode=yes wrx90 'sed -i "s/\r$//" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh && chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh && /home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/pretest_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/package_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py && /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --target-calls 104 --max-pos 8600 --dry'
=Upload updated T5 scripts and dry-test capture task diversity
Created At: 2026-11-13T15:17:13-05:00
Completed At: 2026-11-13T15:17:29-05:00
Command exited with code 0.

Command output:
Selected 104 calls: splits={'fit': 78, 'check': 26}, unique_tasks={fit: 59, check: 20}
  strata={('early_pre', 'check'): 4, ('early_pre', 'fit'): 22, ('edit_tool', 'check'): 7, ('edit_tool', 'fit'): 20, ('late_pre', 'check'): 8, ('late_pre', 'fit'): 19, ('post_edit', 'check'): 7, ('post_edit', 'fit'): 17}
  expanded point counts={'turn': 104, 'ch_open': 104, 'cont': 700, 'close': 104, 'think': 104, 'call_tok': 104, 'tool': 104, 'arg': 197} (total 1521)
terminalJ?
=upload updated T5 scripts and dry-test capture task diversityR
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py C:\Users\Owner\wsp31_loop\work\gemini\run_t5_gpu_pipeline.sh wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/ ; ssh -o BatchMode=yes wrx90 'sed -i "s/\r$//" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh && chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh && /home/keith/gemma-v2/tii-venv/bin/python -m py_compile /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/pretest_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/package_t5.py /home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py && /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/capture_t5_stats.py --target-calls 10
[... 1748 characters cut ...]

{"CommandLine":"ssh -o BatchMode=yes wrx90 'flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1020 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh'","WaitMsBeforeAsync":5000,"toolSummary":"Run unified Turn 5 GPU capture, closed-form fit, build, and pre-test pipeline"}:
-1993e737-e49e-4f87-9e50-f234f7917537/task-231
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-231.log
?[T5-GPU] Acquired gpu0.lock at Fri Nov 13 03:17:46 PM EST 2026
"
ssh -o BatchMode=yes wrx90 'flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1020 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh':MRun unified Turn 5 GPU capture, closed-form fit, build, and pre-test pipelineB
MRun unified Turn 5 GPU capture, closed-form fit, build, and pre-test pipeline
ssh -o BatchMode=yes wrx90 'flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1020 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh'
Command exited with code 1.

Command output:
[T5-GPU] Acquired gpu0.lock at Fri Nov 13 03:17:46 PM EST 2026
Selected 104 calls: splits={'fit': 78, 'check': 26}, unique_tasks={fit: 59, check: 20}
  strata={('early_pre', 'check'): 4, ('early_pre', 'fit'): 22, ('edit_tool', 'check'): 7, ('edit_tool', 'fit'): 20, ('late_pre', 'check'): 8, ('late_pre', 'fit'): 19, ('post_edit', 'check'): 7, ('post_edit', 'fit'): 17}
  expanded point counts={'turn': 104, 'ch_open': 104, 'cont': 700, 'close': 104, 'think': 104, 'call_tok': 104, 'tool': 104, 'arg': 197} (total 1521)
[  1/104] aa__tophat__syrupy-768__7                          len= 7678 pts=12 6.70s elapsed=15s
[ 20/104] b001_base__joke2k__django-environ-361__7           len= 6366 pts= 8 5.61s elapsed=128s
[ 40/104] b001_zero__qiskit__qiskit-11272__19                len= 7291 pts=21 6.29s elapsed=246s
Stopping at call 56/104: budget 340.0s reached
DONE: saved /home/keith/gemma-v2/wsp31/authors/gemini/scratch/raw_capture_t5.pt (3544.2 MB) in 343.4s
[... 50 lines cut ...]
  File "/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py", line 604, in cmd_fit
    "captured_calls_count": len(raw["close_meta"]),
                                ~~~^^^^^^^^^^^^^^
[line removed by the dashboard scrubber]
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
ssh -o BatchMode=yes wrx90 'flock /home/keith/gemma-v2/wsp31/gpu0.lock timeout 1020 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_gpu_pipeline.sh':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/231/output.txt

h{"EndLine":328,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py","StartLine":200}:
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py
~
|Created At: 2026-11-13T15:18:03-05:00
Completed At: 2026-11-13T15:18:03-05:00
Showing lines 200-328 of 328
200: {info['size_line_ctrl']}
201: 
202: {common_data_block}
203: 
204: Construction (`code/fit_and_build_t5.py`, family `nullspace_close_r4`, rank 4 across 100 writer matrices `o_proj` and `down_proj` of layers `10..59`, lexical layers `0..9` untouched):
[line removed by the dashboard scrubber]
206: 2. Form the 12-direction orthonormal **Preserve Guard Basis** `G_{{L,m}}` on fit tasks from: `unit(mean(s))` (1), top-2 SVD of `u(turn)` (2), top-2 SVD of `u(ch_open)` at `<|channel>` (2), mean `u(think)` at `<channel|>` (1), top-2 SVD of `u(call_tok)` at `<|tool_call>call` (2), top-2 SVD of `u(tool)` at `:` (2), and top-2 SVD of `u(arg)` inside tool arguments (2).
207: 3. Project `X_{{L,m}} = d_{{L,m}} (I - G_{{L,m}}^T G_{{L,m}})`, take the top-4 right singular vectors `Q = [q_1..q_4]` re-orthonormalized in float64 strictly orthogonal to `G_{{L,m}}`, weight by `w_j = clamp(s_j^2 / s_1^2, 0.03, 1.0)` and depth envelope `env(L)` (`0.25..0.745` on `L10..19`, `1.00` on `L20..55`, `0.92..0.74` on `L56..59` to temper final-layer lexical kurtosis spikes), and set `dW_{{L,m}} = +alpha env(L) (Q^T diag(w) Q) W_{{L,m}}` scaled via `scale_to(per_matrix=1.0, net_rel={info['net_rel']:.4f})`.
208: 
209: Matched control (`ctrl/`): Same 100 writer matrices (`L10..59`), rank 4, spectral profile `w`, and depth envelope `env(L)`, with `Q` replaced per `(L, m)` by 4 seeded orthonormal Gaussian vectors orthogonal to `span(Q, G_{{L,m}})` (`seed = 710000 + 100*L + mod_idx`) and exact per-matrix Frobenius norms matched via `match_sizes`.
210: 
211: Approximations: bf16 LoRA storage; first-order nullspace cancellation before post-writer RMSNorm; teacher-forced offline pre-test on unseen check tasks (`causal.py` verdict thresholds and `closeprobe.py` are marked NOT VERIFIED YET in `TOOLS.md`, so we benchmark directly alongside stage-1 +6.0 rollout winner `0015` on the identical check points).
212: 
213: Held-out unseen check-task subspace diagnostics (`L10..59`, `{fit_sum['check_tasks_count']}` tasks):
[... 111 lines cut ...]
325: 
326: 
327: if __name__ == "__main__":
328:     main()
I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py

h{"EndLine":310,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":250}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:18:11-05:00
Completed At: 2026-11-13T15:18:11-05:00
Showing lines 250-310 of 854
250:         ft_cl = [t for t in fit_tasks if t in cl_map]
251:         ft_sd = [t for t in fit_tasks if t in sd_map]
252:         assert len(ft) >= 4, f"Too few deep+early fit tasks ({len(ft)}) for {sp_name}"
253: 
254:         E_fit = torch.stack([ce_map[t] for t in ft]).double()
255:         P_fit = torch.stack([cd_map[t] for t in ft]).double()
256:         Z_fit = torch.stack([cl_map[t] for t in ft_cl]).double()
257:         SD_fit = torch.stack([sd_map[t] for t in ft_sd]).double()
258: 
259:         for l in DAMP_LAYERS:
260:             e_bar = unit64(E_fit[:, l].mean(0))[None, :]
261:             z_bar = unit64(Z_fit[:, l].mean(0))[None, :]
262:             sd_dirs = top_svd_dirs(sd_map, fit_tasks, l, 2)  # strictly orthogonal to close-cont (0015 & Entry 1)!
263:             h_list = [
264:                 e_bar, z_bar, sd_dirs,
[... 42 lines cut ...]
307:         order = torch.argsort(mlp_act_abs[l])
308:         quiet_pair[l] = (int(order[0]), int(order[1]))
309: 
310:     e_base   = EditSet()
I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py

h{"EndLine":660,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":630}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:18:20-05:00
Completed At: 2026-11-13T15:18:20-05:00
Showing lines 630-660 of 854
630:             "mean_act_neg_other": round(m_fo, 6),
631:             "min_act_anywhere": min_all_act,
632:             "per_layer": commit_diag,
633:         },
634:         "colon_guard": {
635:             "layers": COLON_LAYERS,
636:             "auc_chk": round(mc_auc, 6),
637:             "mean_act_call_tok": round(mc_pa, 4),
638:             "mean_act_other": round(mc_na, 6),
639:             "per_layer": colon_diag,
640:         },
641:     }
642: 
643:     os.makedirs(os.path.dirname(a.out), exist_ok=True)
644:     torch.save({
[... 12 lines cut ...]
657: 
658: # ==============================================================================
659: # 2. BUILDERS FOR EDIT + MATCHED CONTROL
660: # ==============================================================================
I
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9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py","Replacement":"3. Project `X_{{L,m}} = d_{{L,m}} (I - G_{{L,m}}^T G_{{L,m}})`, take the top-4 right singular vectors `Q = [q_1..q_4]` re-orthonormalized in float64 strictly orthogonal to `G_{{L,m}}`, weight by `w_j = clamp(s_j^2 / s_1^2, 0.03, 1.0)` and depth envelope `env(L)` (`0.25..0.745` on `L10..19`, `1.00` on `L20..55`, `0.92..0.74` on `L56..59` to temper final-layer lexical kurtosis spikes), normalize each `(L, m)` perturbation to `env(L) * ||W_{{L,m}}||_F`, and scale globally to `net_rel = {info['net_rel']:.4f}`.","Target":"3. Project `X_{{L,m}} = d_{{L,m}} (I - G_{{L,m}}^T G_{{L,m}})`, take the top-4 right singular vectors `Q = [q_1..q_4]` re-orthonormalized in float64 strictly orthogonal to `G_{{L,m}}`, weight by `w_j = clamp(s_j^2 / s_1^2, 0.03, 1.0)` and depth envelope `env(L)` (`0.25..0.745` on `L10..19`, `1.00` on `L20..55`, `0.92..0.74` on `L56..59` to temper final-layer lexical kurtosis spikes), and set `dW_{{L,m}} = +alpha env(L) (Q^T diag(w) Q) W_{{L,m}}` scaled via `scale_to(per_matrix=1.0, net_rel={info['net_rel']:.4f})`."}:
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py
3. Project `X_{{L,m}} = d_{{L,m}} (I - G_{{L,m}}^T G_{{L,m}})`, take the top-4 right singular vectors `Q = [q_1..q_4]` re-orthonormalized in float64 strictly orthogonal to `G_{{L,m}}`, weight by `w_j = clamp(s_j^2 / s_1^2, 0.03, 1.0)` and depth envelope `env(L)` (`0.25..0.745` on `L10..19`, `1.00` on `L20..55`, `0.92..0.74` on `L56..59` to temper final-layer lexical kurtosis spikes), normalize each `(L, m)` perturbation to `env(L) * ||W_{{L,m}}||_F`, and scale globally to `net_rel = {info['net_rel']:.4f}`.
3. Project `X_{{L,m}} = d_{{L,m}} (I - G_{{L,m}}^T G_{{L,m}})`, take the top-4 right singular vectors `Q = [q_1..q_4]` re-orthonormalized in float64 strictly orthogonal to `G_{{L,m}}`, weight by `w_j = clamp(s_j^2 / s_1^2, 0.03, 1.0)` and depth envelope `env(L)` (`0.25..0.745` on `L10..19`, `1.00` on `L20..55`, `0.92..0.74` on `L56..59` to temper final-layer lexical kurtosis spikes), and set `dW_{{L,m}} = +alpha env(L) (Q^T diag(w) Q) W_{{L,m}}` scaled via `scale_to(per_matrix=1.0, net_rel={info['net_rel']:.4f})`.
Created At: 2026-11-13T15:18:37-05:00
Completed At: 2026-11-13T15:18:38-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py starting at line 207 (+1/-1 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
p
l"""write_t5_entries.py: Builds, rebuild-verifies byte-for-byte, validates, and (when --mark-ready is passed)
y
umarks Turn 5 entries READY one at a time, generating complete record.md files with head-to-head ref_e0015 benchmarks.
*
&G = R / "wsp31" / "authors" / "gemini"
=
9def fmt_causal_md(arm_label: str, arm_data: dict) -> str:
[... 274 lines cut ...]
7        assert (entry / req).exists(), f"Missing {req}"
-
)        pkg.write_lf(entry / "READY", "")
N
J        print(f"=== QUEUED & READY: {entry} ({tot_bytes/1e6:.1f} MB) ===")
_
[        print(f"=== PACKAGED (not marked READY yet): {entry} ({tot_bytes/1e6:.1f} MB) ===")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/239/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py","Replacement":"1. **Disjoint Close- \u0026 Protocol-Orthogonal Deep-Rumination Damping (`L24..59`, all 7 modules = 252 matrices, rank 2, `net_rel_damp = {info['net_rel']:.4f}`)**: In `attn_raw, mlp_raw, mlp_in, attn_in`, compute fit-task `cont_deep(\u003e=400) - cont_early(\u003c180)` projected strictly orthogonal to `mean(cont_early)`, `mean(close_all)`, top-2 `close - cont` (`Q_close`), and protocol guards (`turn, ch_open, think, call_tok, tool, arg`). Apply subtractive damping (`-beta Q_rum^T diag(w) Q_rum W` on writers, `-beta W Q_rum^T diag(w) Q_rum` on readers) normalized to `env_damp(L) * ||W||_F` and global `net_rel_damp`, explicitly zeroing rows/columns of the 1--2 reserved dormant neurons `(j_1, j_2)` so damping and surgical neurons act on **strictly disjoint rows/columns** (zero cross-term interference, exact Pythagorean Frobenius norm).","Target":"1. **Disjoint Close- \u0026 Protocol-Orthogonal Deep-Rumination Damping (`L24..59`, all 7 modules = 252 matrices, rank 2, `net_rel_damp = {info['net_rel']:.4f}`)**: In `attn_raw, mlp_raw, mlp_in, attn_in`, compute fit-task `cont_deep(\u003e=500) - cont_early(\u003c180)` projected strictly orthogonal to `mean(cont_early)`, `mean(close_all)`, top-2 `close - cont` (`Q_close`), and protocol guards (`turn, ch_open, think, call_tok, tool, arg`). Apply subtractive damping (`-beta Q_rum^T diag(w) Q_rum W` on writers, `-beta W Q_rum^T diag(w) Q_rum` on readers), explicitly zeroing rows/columns of the 1--2 reserved dormant neurons `(j_1, j_2)` so damping and surgical neurons act on **strictly disjoint rows/columns** (zero cross-term interference, exact Pythagorean Frobenius norm)."}2
1. **Disjoint Close- & Protocol-Orthogonal Deep-Rumination Damping (`L24..59`, all 7 modules = 252 matrices, rank 2, `net_rel_damp = {info['net_rel']:.4f}`)**: In `attn_raw, mlp_raw, mlp_in, attn_in`, compute fit-task `cont_deep(>=500) - cont_early(<180)` projected strictly orthogonal to `mean(cont_early)`, `mean(close_all)`, top-2 `close - cont` (`Q_close`), and protocol guards (`turn, ch_open, think, call_tok, tool, arg`). Apply subtractive damping (`-beta Q_rum^T diag(w) Q_rum W` on writers, `-beta W Q_rum^T diag(w) Q_rum` on readers), explicitly zeroing rows/columns of the 1--2 reserved dormant neurons `(j_1, j_2)` so damping and surgical neurons act on **strictly disjoint rows/columns** (zero cross-term interference, exact Pythagorean Frobenius norm).
A
9C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py
1. **Disjoint Close- & Protocol-Orthogonal Deep-Rumination Damping (`L24..59`, all 7 modules = 252 matrices, rank 2, `net_rel_damp = {info['net_rel']:.4f}`)**: In `attn_raw, mlp_raw, mlp_in, attn_in`, compute fit-task `cont_deep(>=400) - cont_early(<180)` projected strictly orthogonal to `mean(cont_early)`, `mean(close_all)`, top-2 `close - cont` (`Q_close`), and protocol guards (`turn, ch_open, think, call_tok, tool, arg`). Apply subtractive damping (`-beta Q_rum^T diag(w) Q_rum W` on writers, `-beta W Q_rum^T diag(w) Q_rum` on readers) normalized to `env_damp(L) * ||W||_F` and global `net_rel_damp`, explicitly zeroing rows/columns of the 1--2 reserved dormant neurons `(j_1, j_2)` so damping and surgical neurons act on **strictly disjoint rows/columns** (zero cross-term interference, exact Pythagorean Frobenius norm).
Created At: 2026-11-13T15:18:37-05:00
Completed At: 2026-11-13T15:18:39-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py starting at line 253 (+1/-1 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/write_t5_entries.py
p
l"""write_t5_entries.py: Builds, rebuild-verifies byte-for-byte, validates, and (when --mark-ready is passed)
y
umarks Turn 5 entries READY one at a time, generati
[... 539 characters cut ...]

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\write_t5_entries.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py","WaitMsBeforeAsync":5000,"toolSummary":"Sync updated write_t5_entries.py to wrx90"}:
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py
)Sync updated write_t5_entries.py to wrx90
Created At: 2026-11-13T15:18:53-05:00
Completed At: 2026-11-13T15:18:55-05:00
Command exited with code 0.

No output from the command.
terminalJ+
)sync updated write_t5_entries.py to wrx90R
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\write_t5_entries.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/write_t5_entries.py:%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/242/output.txt

[Message] timestamp=2026-11-13T20:23:53Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-231 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-231" finished with result:
Command exited with code 1.

Command output:
[T5-GPU] Acquired gpu0.lock at Fri Nov 13 03:17:46 PM EST 2026
Selected 104 calls: splits={'fit': 78, 'check': 26}, unique_tasks={fit: 59, check: 20}
  strata={('early_pre', 'check'): 4, ('early_pre', 'fit'): 22, ('edit_tool', 'check'): 7, ('edit_tool', 'fit'): 20, ('late_pre', 'check'): 8, ('late_pre', 'fit'): 19, ('post_edit', 'check'): 7, ('post_edit', 'fit'): 17}
  expanded point counts={'turn': 104, 'ch_open': 104, 'cont': 700, 'close': 104, 'think': 104, 'call_tok': 104, 'tool': 104, 'arg': 197} (total 1521)
[  1/104] aa__tophat__syrupy-768__7                          len= 7678 pts=12 6.70s elapsed=15s
[ 20/104] b001_base__joke2k__django-environ-361__7           len= 6366 pts= 8 5.61s elapsed=128s
[ 40/104] b001_zero__qiskit__qiskit-11272__19                len= 7291 pts=21 6.29s elapsed=246s
Stopping at call 56/104: budget 340.0s reached
DONE: saved /home/keith/gemma-v2/wsp31/authors/gemini/scratch/raw_capture_t5.pt (3544.2 MB) in 343.4s
Fitting Turn 5 directions on 43 stage-1 fit tasks; held-out check on 13 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.9970 | Held-out protocol leak ||Q u_pres||: 0.2654 -> 0.0546 (79.4% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.9832 | Held-out protocol leak ||Q u_pres||: 0.1725 -> 0.0358 (79.2% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.8229, mlp_raw=0.8646, mlp_in=0.9757, attn_in=0.8594 | max |<Q_rum, Q_close>| = 1.04e-16
Commit gate fit buckets : {'pos_late_pre': 13, 'neg_early_pre': 16, 'neg_post_edit': 12, 'neg_arg': 82, 'neg_other': 507}
Commit gate chk buckets : {'pos_late_pre': 5, 'neg_early_pre': 4, 'neg_post_edit': 3, 'neg_arg': 23, 'neg_other': 142, 'mid_pre_6': 1}
Colon guard fit/chk     : fit pos=43 neg=589 | chk pos=13 neg=165
[... 82 lines cut ...]
    cmd_fit(a)
    ~~~~~~~^^^
  File "/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py", line 604, in cmd_fit
    "captured_calls_count": len(raw["close_meta"]),
                                ~~~^^^^^^^^^^^^^^
[line removed by the dashboard scrubber]

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-231.log

:(bot-16d464bc-e9f9-4f99-a5e2-59f0d25a7840B!
	sessionID
The task's primary data artifact is already available. The model initially assumed a re-capture was necessary. Examining the saved path indicates this is not the case; the required data is on disk.


The analysis reveals significant held-out performance improvements. Two configurations show approximately 80% reduction in protocol leakage while maintaining high paired AUC scores. Another configuration demonstrates strong selectivity with substantial differences in mean activations across various conditions.


Regularization strength adjustment appears crucial. Initial results suggest under-regularization in the original configuration. Increased regularization should improve the separation between tool and non-tool data. Examining the model's training process reveals the potential for performance enhancement by emphasizing tool-specific features.


2(bot-16d464bc-e9f9-4f99-a5e2-59f0d25a7840:
h{"EndLine":315,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","StartLine":280}:
h{"EndLine":520,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":420}Z

h{"EndLine":315,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","StartLine":280}:
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py
Created At: 2026-11-13T15:24:15-05:00
Completed At: 2026-11-13T15:24:15-05:00
Showing lines 280-315 of 525
280:                 "tool_next": tp["next"], "exact": True,
281:             })
282:         for off in (3, 9):
283:             ap = tpos + off
284:             if ap < len(ids) - 1 and ap not in seen_pos:
285:                 seen_pos.add(ap)
286:                 pts.append({"pos": ap, "kind": "arg", "next": ids[ap + 1], "depth": 0, "tok": ids[ap], "exact": True})
287: 
[line removed by the dashboard scrubber]
289:     return pts
290: 
291: 
292: def unit(v):
293:     return v / (v.norm(dim=-1, keepdim=True) + 1e-12)
294: 
[... 17 lines cut ...]
312:     print(f"Selected {len(selected)} calls: splits={dict(by_sp)}, unique_tasks={{fit: {len(tasks_sp['fit'])}, check: {len(tasks_sp['check'])}}}")
313:     print(f"  strata={dict(sorted(st_cnt.items()))}")
314:     print(f"  expanded point counts={dict(k_cnt)} (total {sum(k_cnt.values())})", flush=True)
315:     if a.dry:
I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py

h{"EndLine":520,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":420}2
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
/
-Created At: 2026-11-13T15:24:15-05:00
Completed At: 2026-11-13T15:24:15-05:00
Showing lines 420-520 of 854
420:         gi = gl_to_idx[l]
421:         j1, _ = quiet_pair[l]
422:         X_lay = X_all[:, gi].double()
423:         coord_rms = X_lay[fit_all_ix].pow(2).mean(dim=0).sqrt().clamp(min=1e-3)
424:         Z_lay = X_lay / coord_rms[None, :]
425: 
426:         u_z = woodbury_ridge(Z_lay[fit_all_ix], torch.ones(len(fit_all_ix), dtype=torch.float64), sw_u_all, 0.50 * d)
427:         u_z = u_z / max(float((Z_lay[fit_all_ix] @ u_z).mean()), 0.1)
428: 
429:         Zt = torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0)
430:         wt_z = woodbury_ridge(Zt, yt_fit, swt_fit, 0.10 * d)
431: 
432:         Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)
433:         wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 1.00 * d)
[... 83 lines cut ...]
517:             "auc_early": round(auc_score(z_chk_map.get("pos_late_pre", torch.empty(0)), z_chk_map.get("neg_early_pre", torch.empty(0))), 4),
518:             "auc_post":  round(auc_score(z_chk_map.get("pos_late_pre", torch.empty(0)), z_chk_map.get("neg_post_edit", torch.empty(0))), 4),
519:             "auc_other": round(auc_score(z_chk_map.get("pos_late_pre", torch.empty(0)), z_chk_map.get("neg_other", torch.empty(0))), 4),
520:             "post_norm_cos_chk": round(cos_chk, 4),
I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py

:(bot-1f4f2c00-002c-4ce9-8220-a858041c5f32B!
	sessionID
The code snippet, specifically line 454, reveals a calculation involving `g_z`, `wt_z`, `mu_t`, `u_z`, `k_t`, `wr_z`, `tau_r`, and `k_r`. Analysis of the AUC scores, `auc_early` and `auc_post`, suggests that the variation of `wt_z` across tool calls might be influencing the observed performance differences in `g_z`. The hypothesis is that the tool call positions could be significant, with early or post-edit calls exhibiting different `wt_z` values.


The analysis indicates that the `k_t * (wt_z - mu_t * u_z)` term dominates the calculation, potentially overshadowing the intended signal from `wr_z`. Several strategies could mitigate this, including making `wt_z` constant across tool calls or projecting `wt_z - mu_t * u_z` orthogonally. Further examination reveals that `wt_z` is primarily used to push non-tool positions negative, raising the question of why the `k_t` term is affecting rankings within tool calls.


The calculation term involving `wt_z` was not zeroed out, leading to the idea of projecting `wt_z - mu_t * u_z` orthogonally. Examining the tool vectors `Z_tool`, the subspace spanned by their centered versions is 40-dimensional. Projecting `wt_z - mu_t * u_z` orthogonal to the top principal components of this centered subspace would result in near-zero variance across tool calls while still allowing the separation of tool and non-tool positions. This approach could be coupled with a regularization strategy for `wr_z` to prevent overfitting.


2(bot-1f4f2c00-002c-4ce9-8220-a858041c5f32:
h{"EndLine":525,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","StartLine":495}:

h{"EndLine":525,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\capture_t5_stats.py","StartLine":495}:
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py
Created At: 2026-11-13T15:24:38-05:00
Completed At: 2026-11-13T15:24:38-05:00
Showing lines 495-525 of 525
495:                 iid: (vec / task_cnts[b][iid]).float()
496:                 for iid, vec in task_sums[sp_name][b].items() if task_cnts[b][iid] > 0
497:             }
498: 
499:     out_obj = {
500:         "layers": layers,
501:         "gate_layers": gate_layers_used,
502:         "task_split": task_split,
503:         "task_cnts": {b: dict(c) for b, c in task_cnts.items()},
504:         "task_means": task_means,
505:         "mlp_act_mean_abs": (mlp_act_abs_sum / max(1, mlp_act_n)).float(),
506:         "mlp_raw_mean_rms": (mlp_raw_rms_sum / max(1, mlp_act_n)).float(),
507:         "norms": {
508:             "post_attn": post_attn_w, "in_norm": in_norm_w,
509:             "post_ff": post_ff_w, "pre_ff": pre_ff_w,
[... 12 lines cut ...]
522: 
523: 
524: if __name__ == "__main__":
525:     main()
I
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2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\capture_t5_stats.py

h{"EndLine":445,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":385}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:24:48-05:00
Completed At: 2026-11-13T15:24:48-05:00
Showing lines 385-445 of 854
385:     cc_ix = [i for i, m in enumerate(cmeta) if m["split"] == "check"]
386: 
387:     fit_all_ix = torch.tensor(fit_colon_pos + fit_colon_neg, dtype=torch.long)
388:     sw_u_all   = torch.ones(len(fit_all_ix), dtype=torch.float64) / len(fit_all_ix)
389: 
390:     f_tool_ix = torch.tensor(fit_cb["pos_late_pre"] + fit_cb["neg_early_pre"] + fit_cb["neg_post_edit"], dtype=torch.long)
391:     f_nt_ix   = torch.tensor(fit_cb["neg_arg"] + fit_cb["neg_other"], dtype=torch.long)
392:     fp_ix     = torch.tensor(fit_cb["pos_late_pre"], dtype=torch.long)
393:     fe_ix     = torch.tensor(fit_cb["neg_early_pre"], dtype=torch.long)
394:     fpo_ix    = torch.tensor(fit_cb["neg_post_edit"], dtype=torch.long)
395:     fne_t_ix  = torch.tensor(fit_cb["neg_early_pre"] + fit_cb["neg_post_edit"], dtype=torch.long)
396: 
397:     yt_fit  = torch.cat([torch.ones(len(f_tool_ix)), -torch.ones(len(f_nt_ix))]).double()
398:     swt_fit = torch.cat([torch.full((len(f_tool_ix),), 1.0 / len(f_tool_ix)),
399:                          torch.full((len(f_nt_ix),),   1.0 / len(f_nt_ix))]).double()
[... 42 lines cut ...]
442:         gap   = max(pos_q - neg_q, 0.030)
443:         k_r   = min(4.2 / gap, 55.0)
444:         tau_r = neg_q + 2.2 / k_r  # maps 84th pct of neg tool calls to z=-2.2 (act=0.03), 55th pct of pos_late_pre to z=+2.0 (act=1.95)
445:
I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","Replacement":"        # Orthogonalize tool-vs-nontool detector against within-tool variation so it stays ~constant across tool calls!\n        u_tool = (Z_lay[f_tool_ix] @ u_z).clamp(min=0.3)\n        Z_tool_rel = Z_lay[f_tool_ix] / u_tool[:, None]\n        T_cent = Z_tool_rel - Z_tool_rel.mean(0, keepdim=True)\n        _, _, Vt_tool = torch.linalg.svd(T_cent, full_matrices=False)\n        B_tool_var = Vt_tool[:min(24, Vt_tool.shape[0])]  # top-24 within-tool principal axes\n\n        Zt_orth = orth_to(torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0), [B_tool_var])\n        wt_z = orth_to(woodbury_ridge(Zt_orth, yt_fit, swt_fit, 0.25 * d)[None, :], [B_tool_var])[0]\n\n        Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)\n        wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 4.00 * d)","Target":"        Zt = torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0)\n        wt_z = woodbury_ridge(Zt, yt_fit, swt_fit, 0.10 * d)\n\n        Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)\n        wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 1.00 * d)"}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
# Orthogonalize tool-vs-nontool detector against within-tool variation so it stays ~constant across tool calls!
        u_tool = (Z_lay[f_tool_ix] @ u_z).clamp(min=0.3)
        Z_tool_rel = Z_lay[f_tool_ix] / u_tool[:, None]
        T_cent = Z_tool_rel - Z_tool_rel.mean(0, keepdim=True)
        _, _, Vt_tool = torch.linalg.svd(T_cent, full_matrices=False)
        B_tool_var = Vt_tool[:min(24, Vt_tool.shape[0])]  # top-24 within-tool principal axes

        Zt_orth = orth_to(torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0), [B_tool_var])
        wt_z = orth_to(woodbury_ridge(Zt_orth, yt_fit, swt_fit, 0.25 * d)[None, :], [B_tool_var])[0]

        Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)
        wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 4.00 * d)
Zt = torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0)
        wt_z = woodbury_ridge(Zt, yt_fit, swt_fit, 0.10 * d)

        Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)
        wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 1.00 * d)
Created At: 2026-11-13T15:25:11-05:00
[... 968 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/253/output.txt

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","Replacement":"    summary = {\n        \"captured_calls_count\": len(raw[\"tool_meta\"]),\n        \"fit_tasks_count\": len(fit_tasks),","Target":"    summary = {\n        \"captured_calls_count\": len(raw[\"close_meta\"]),\n        \"fit_tasks_count\": len(fit_tasks),"}2
q    summary = {
        "captured_calls_count": len(raw["tool_meta"]),
        "fit_tasks_count": len(fit_tasks),
|
r    summary = {
        "captured_calls_count": len(raw["close_meta"]),
        "fit_tasks_count": len(fit_tasks),
A
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:25:11-05:00
Completed At: 2026-11-13T15:25:15-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py starting at line 610 (+1/-1 lines).
C
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.pyJK"I
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.FileEdit
9C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
l
h"""fit_and_build_t5.py: Turn 5 deterministic closed-form fitter and PEFT LoRA builder for author gemini.
[... 955 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/254/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py fit --raw /home/keith/gemma-v2/wsp31/authors/gemini/scratch/raw_capture_t5.pt --out /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt'","WaitMsBeforeAsync":10000,"toolSummary":"Run CPU closed-form direction fitting on captured raw_capture_t5.pt"}:
-1993e737-e49e-4f87-9e50-f234f7917537/task-256
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-256.log"
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py fit --raw /home/keith/gemma-v2/wsp31/authors/gemini/scratch/raw_capture_t5.pt --out /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt':CRun CPU closed-form direction fitting on captured raw_capture_t5.ptB
CRun CPU closed-form direction fitting on captured raw_capture_t5.pt
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py fit --raw /home/keith/gemma-v2/wsp31/authors/gemini/scratch/raw_capture_t5.pt --out /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt'
Command exited with code 0.

Command output:
Fitting Turn 5 directions on 43 stage-1 fit tasks; held-out check on 13 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.9970 | Held-out protocol leak ||Q u_pres||: 0.2654 -> 0.0546 (79.4% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.9832 | Held-out protocol leak ||Q u_pres||: 0.1725 -> 0.0358 (79.2% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.8229, mlp_raw=0.8646, mlp_in=0.9757, attn_in=0.8594 | max |<Q_rum, Q_close>| = 1.04e-16
Commit gate fit buckets : {'pos_late_pre': 13, 'neg_early_pre': 16, 'neg_post_edit': 12, 'neg_arg': 82, 'neg_other': 507}
Commit gate chk buckets : {'pos_late_pre': 5, 'neg_early_pre': 4, 'neg_post_edit': 3, 'neg_arg': 23, 'neg_other': 142, 'mid_pre_6': 1}
Colon guard fit/chk     : fit pos=43 neg=589 | chk pos=13 neg=165
[commit_gate L32..59] Held-out AUCs: vs_early=0.6661, vs_post=0.5190, vs_other=0.9357 | post-RMSNorm cos=0.9485
  Held-out mean_act: pos_late_pre=0.032 vs neg_early=0.0182, neg_post=0.0347, neg_other=0.00469 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=1.000000 | mean_act call_tok=4.789 vs all_other=0.000036
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt (89.9 MB)
[... 11 lines cut ...]
[commit_gate L32..59] Held-out AUCs: vs_early=0.6661, vs_post=0.5190, vs_other=0.9357 | post-RMSNorm cos=0.9485
  Held-out mean_act: pos_late_pre=0.032 vs neg_early=0.0182, neg_post=0.0347, neg_other=0.00469 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=1.000000 | mean_act call_tok=4.789 vs all_other=0.000036
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt (89.9 MB)
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py fit --raw /home/keith/gem
[... 304 characters cut ...]

[Message] timestamp=2026-11-13T20:25:53Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-256 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-256" finished with result:
Command exited with code 0.

Command output:
Fitting Turn 5 directions on 43 stage-1 fit tasks; held-out check on 13 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.9970 | Held-out protocol leak ||Q u_pres||: 0.2654 -> 0.0546 (79.4% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.9832 | Held-out protocol leak ||Q u_pres||: 0.1725 -> 0.0358 (79.2% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.8229, mlp_raw=0.8646, mlp_in=0.9757, attn_in=0.8594 | max |<Q_rum, Q_close>| = 1.04e-16
Commit gate fit buckets : {'pos_late_pre': 13, 'neg_early_pre': 16, 'neg_post_edit': 12, 'neg_arg': 82, 'neg_other': 507}
Commit gate chk buckets : {'pos_late_pre': 5, 'neg_early_pre': 4, 'neg_post_edit': 3, 'neg_arg': 23, 'neg_other': 142, 'mid_pre_6': 1}
Colon guard fit/chk     : fit pos=43 neg=589 | chk pos=13 neg=165
[commit_gate L32..59] Held-out AUCs: vs_early=0.6661, vs_post=0.5190, vs_other=0.9357 | post-RMSNorm cos=0.9485
  Held-out mean_act: pos_late_pre=0.032 vs neg_early=0.0182, neg_post=0.0347, neg_other=0.00469 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=1.000000 | mean_act call_tok=4.789 vs all_other=0.000036
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt (89.9 MB)

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-256.log
LRun CPU closed-form direction fitting on captured raw_capture_t5.pt finishedR
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py ; ssh -o BatchMode=yes wrx90 '/home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build_t5.py fit --raw /home/keith/gemma-v2/wsp31/authors/gemini/scratch/raw_capture_t5.pt --out /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt'
"
[... 24 lines cut ...]
Commit gate chk buckets : {'pos_late_pre': 5, 'neg_early_pre': 4, 'neg_post_edit': 3, 'neg_arg': 23, 'neg_other': 142, 'mid_pre_6': 1}
Colon guard fit/chk     : fit pos=43 neg=589 | chk pos=13 neg=165
[commit_gate L32..59] Held-out AUCs: vs_early=0.6661, vs_post=0.5190, vs_other=0.9357 | post-RMSNorm cos=0.9485
  Held-out mean_act: pos_late_pre=0.032 vs neg_early=0.0182, neg_post=0.0347, neg_other=0.00469 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=1.000000 | mean_act call_tok=4.789 vs all_other=0.000036
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt (89.9 MB)

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-256.log

{"CommandLine":"ssh -o BatchMode=yes wrx90 'sed -n \"150,245p\" /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build.py'","WaitMsBeforeAsync":5000,"toolSummary":"Read Turn 2 commit gate ridge formulation in fit_and_build.py"}:
nssh -o BatchMode=yes wrx90 'sed -n "150,245p" /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build.py'
=Read Turn 2 commit gate ridge formulation in fit_and_build.py
U
)Created At: 2026-11-13T15:26:09-05:00
Completed At: 2026-11-13T15:26:11-05:00
Command exited with code 0.

Command output:
    print(f"[Family 1: exact_close_r4] Held-out paired check AUC (mean over 60 layers): "
          f"o_proj={sum(f1_aucs['o_proj'])/60:.4f}, down_proj={sum(f1_aucs['down_proj'])/60:.4f}")

    # ---- B. Family 2: rumination_damp_r2 (layers 20..59, all 7 modules = 280 matrices, rank 2, alpha < 0) ----
    # Module spaces:
    #   writers: o_proj -> attn_raw, down_proj -> mlp_raw
    #   readers: gate_proj, up_proj -> mlp_in; q_proj, k_proj, v_proj -> attn_in
    f2_dirs = {}   # "{l}.{sp_tag}": {"Q": [2, d] fp32, "w": [2] fp32, "basis_guard": [2, d] fp32}
    f2_aucs = collections.defaultdict(list) if "collections" in globals() else {"attn_raw": [], "mlp_raw": [], "mlp_in": [], "attn_in": []}

    for sp_name in ("attn_raw", "mlp_raw", "mlp_in", "attn_in"):
[... 182 lines cut ...]
    te_ix = [i for i, m in enumerate(tmeta) if m["split"] == "fit" and m["next"] in (TOK_EDIT, TOK_WRIT)]
    tr_ix = [i for i, m in enumerate(tmeta) if m["split"] == "fit" and m["next"] == TOK_READ]
    assert len(te_ix) >= 5 and len(tr_ix) >= 5, f"Need tool_edit & tool_read fit samples: {len(te_ix)}, {len(tr_ix)}"
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2nssh -o BatchMode=yes wrx90 'sed -n "150,245p" /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build.py':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/260/output.txt

{"CommandLine":"ssh -o BatchMode=yes wrx90 'sed -n \"246,320p\" /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build.py'","WaitMsBeforeAsync":5000,"toolSummary":"Read lines 246-320 of Turn 2 fit_and_build.py"}:
-Read lines 246-320 of Turn 2 fit_and_build.py
}
nssh -o BatchMode=yes wrx90 'sed -n "246,320p" /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build.py'
J
#Created At: 2026-11-13T15:26:18-05:00
Completed At: 2026-11-13T15:26:20-05:00
Command exited with code 0.

Command output:

    SURGICAL_LAYERS = list(range(30, 40)) + [57, 58, 59]  # 13 high-signal layers (L30..39 + L57..59 = 39 MLP matrices)
    f3_neurons = {}
    f3_diag = {}

    fit_used = (fit_ix_by_b["pos_late_pre"] + fit_ix_by_b["neg_early_pre"] +
                fit_ix_by_b["neg_post_edit"] + fit_ix_by_b["neg_arg"] + fit_ix_by_b["neg_other"])
    fit_used_t = torch.tensor(fit_used, dtype=torch.long)

    f_tool_ix = torch.tensor(fit_ix_by_b["pos_late_pre"] + fit_ix_by_b["neg_early_pre"] + fit_ix_by_b["neg_post_edit"], dtype=torch.long)
[... 141 lines cut ...]

        # Evaluate ACTUAL neuron activation a = gelu_tanh(gate_row . x) * (up_row . x) on fit positives
        act_fit_pos = gelu_tanh_f64(X_lay[fp_ix] @ gate_row) * (X_lay[fp_ix] @ up_row)
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
*
powershell2nssh -o BatchMode=yes wrx90 'sed -n "246,320p" /home/keith/gemma-v2/wsp31/authors/gemini/code/fit_and_build.py':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/262/output.txt

f{"EndLine":95,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":55}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:26:32-05:00
Completed At: 2026-11-13T15:26:32-05:00
Showing lines 55-95 of 861
55:     return gelu_tanh_f64(z) * (up_scale * z)
56: 
57: 
58: def auc_score(pos_scores: torch.Tensor, neg_scores: torch.Tensor) -> float:
59:     if pos_scores.numel() == 0 or neg_scores.numel() == 0:
60:         return float("nan")
61:     diff = pos_scores[:, None] - neg_scores[None, :]
62:     return float(((diff > 0).double() + 0.5 * (diff == 0).double()).mean())
63: 
64: 
65: def unit64(v: torch.Tensor) -> torch.Tensor:
66:     v = v.double()
67:     return v / (v.norm(dim=-1, keepdim=True) + 1e-15)
68: 
69: 
[... 22 lines cut ...]
92: 
93: def orth_to(X: torch.Tensor, basis_list) -> torch.Tensor:
94:     """Project 1D [d] or 2D [M, d] tensor strictly orthogonal to span(basis_list) in float64."""
95:     G = orth_basis(basis_list)
G
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py 7(_0

f{"EndLine":55,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","StartLine":25}:
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Created At: 2026-11-13T15:26:38-05:00
Completed At: 2026-11-13T15:26:38-05:00
Showing lines 25-55 of 861
25: T = f"{R}/wsp31/tools"
26: sys.path.insert(0, T)
27: from edits import EditSet
[line removed by the dashboard scrubber]
29: 
30: COLON      = 236787  # :
31: TOK_RUN    = 4503    # run
32: TOK_READ   = 1399    # read
33: TOK_EDIT   = 8982    # edit
34: TOK_WRIT   = 5986    # write
35: TOK_SUB    = 15037   # submit
36: SP_EDIT    = 12287   # ' edit'
37: SP_RUN     = 1845    # ' run'
38: SP_READ    = 1676    # ' read'
39: SP_WRIT    = 4903    # ' write'
[... 12 lines cut ...]
52:     """Exact nonnegative GeGLU activation when up_row = up_scale * gate_row:
53:     act(z) = gelu_tanh(z) * (up_scale * z) >= 0 identically for ALL z in R!
54:     """
55:     return gelu_tanh_f64(z) * (up_scale * z)
G
Afile:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py
2type.googleapis.com/exa.cortex.core.tools.ReadFile
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py","Replacement":"        Zt = torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0)\n        wt_z = woodbury_ridge(Zt, yt_fit, swt_fit, 0.10 * d)\n\n        Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)\n        wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 1.00 * d)","Target":"        # Orthogonalize tool-vs-nontool detector against within-tool variation so it stays ~constant across tool calls!\n        u_tool = (Z_lay[f_tool_ix] @ u_z).clamp(min=0.3)\n        Z_tool_rel = Z_lay[f_tool_ix] / u_tool[:, None]\n        T_cent = Z_tool_rel - Z_tool_rel.mean(0, keepdim=True)\n        _, _, Vt_tool = torch.linalg.svd(T_cent, full_matrices=False)\n        B_tool_var = Vt_tool[:min(24, Vt_tool.shape[0])]  # top-24 within-tool principal axes\n\n        Zt_orth = orth_to(torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0), [B_tool_var])\n        wt_z = orth_to(woodbury_ridge(Zt_orth, yt_fit, swt_fit, 0.25 * d)[None, :], [B_tool_var])[0]\n\n        Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)\n        wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 4.00 * d)"}:
# Orthogonalize tool-vs-nontool detector against within-tool variation so it stays ~constant across tool calls!
        u_tool = (Z_lay[f_tool_ix] @ u_z).clamp(min=0.3)
        Z_tool_rel = Z_lay[f_tool_ix] / u_tool[:, None]
        T_cent = Z_tool_rel - Z_tool_rel.mean(0, keepdim=True)
        _, _, Vt_tool = torch.linalg.svd(T_cent, full_matrices=False)
        B_tool_var = Vt_tool[:min(24, Vt_tool.shape[0])]  # top-24 within-tool principal axes

        Zt_orth = orth_to(torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0), [B_tool_var])
        wt_z = orth_to(woodbury_ridge(Zt_orth, yt_fit, swt_fit, 0.25 * d)[None, :], [B_tool_var])[0]

        Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)
        wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 4.00 * d)
A
9C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py
Zt = torch.cat([Z_lay[f_tool_ix], Z_lay[f_nt_ix]], dim=0)
        wt_z = woodbury_ridge(Zt, yt_fit, swt_fit, 0.10 * d)

        Zw = torch.cat([Z_lay[fp_ix], Z_lay[fe_ix], Z_lay[fpo_ix]], dim=0)
        wr_z = woodbury_ridge(Zw, yw_fit, sww_fit, 1.00 * d)
[... 969 lines cut ...]
?    p_bld.add_argument("--net-rel", type=float, default=0.0046)
D
@    p_bld.add_argument("--commit-dose", type=float, default=1.0)
C
?    p_bld.add_argument("--colon-dose", type=float, default=1.0)
;
7    p_bld.add_argument("--champion", default="current")
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/268/output.txt

{"Content":"#!/usr/bin/env bash\nset -euo pipefail\nexport OMP_NUM_THREADS=8\nexport MKL_NUM_THREADS=8\n\nR=\"/home/keith/gemma-v2\"\nPY=\"$R/tii-venv/bin/python\"\nG=\"$R/wsp31/authors/gemini\"\nCODE=\"$G/code\"\nSCR=\"$G/scratch\"\nDIRS=\"$CODE/data/gemini_t5_directions.pt\"\nCAND=\"$SCR/cands_t5\"\n\necho \"[T5-CPU] Fitting directions \u0026 building candidate adapters at $(date)\"\n\"$PY\" \"$CODE/fit_and_build_t5.py\" fit --raw \"$SCR/raw_capture_t5.pt\" --out \"$DIRS\"\n\nrm -rf \"$CAND\"\nmkdir -p \"$CAND\"\n\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0042 --out \"$CAND/e1_042\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0048 --out \"$CAND/e1_048\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part edit --net-rel 0.0055 --out \"$CAND/e1_055\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family nullspace_close_r4 --part ctrl --net-rel 0.0048 --out \"$CAND/e1_048_ctrl\" --champion current\n\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part edit --net-rel 0.0031 --commit-dose 1.00 --colon-dose 1.00 --out \"$CAND/e2_d10\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part edit --net-rel 0.0032 --commit-dose 1.45 --colon-dose 1.25 --out \"$CAND/e2_d14\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part edit --net-rel 0.0032 --commit-dose 1.90 --colon-dose 1.40 --out \"$CAND/e2_d18\" --champion current\n\"$PY\" \"$CODE/fit_and_build_t5.py\" build --dirs \"$DIRS\" --family ortho_damp_commit_colon --part ctrl --net-rel 0.0032 --commit-dose 1.45 --colon-dose 1.25 --out \"$CAND/e2_d14_ctrl\" --champion current\n\necho \"[T5-GPU] Acquiring gpu0.lock for held-out pretest_t5.py at $(date)\"\nflock \"$R/wsp31/gpu0.lock\" timeout 480 \"$PY\" \"$CODE/pretest_t5.py\" \\\n  --out \"$SCR/pretest_t5.json\" \\\n  --check-traces 4 \\\n  --check-calls 18 \\\n  --max-call-pos 8000 \\\n  --budget-s 420 \\\n  \"ref_e0015=$G/queue/exact-close-r4-subspace/edit\" \\\n  \"e1_048=$CAND/e1_048\" \\\n  \"e1_048_ctrl=$CAND/e1_048_ctrl\" \\\n  \"e2_d14=$CAND/e2_d14\" \\\n  \"e2_d14_ctrl=$CAND/e2_d14_ctrl\" \\\n  \"e1_042=$CAND/e1_042\" \\\n  \"e1_055=$CAND/e1_055\" \\\n  \"e2_d10=$CAND/e2_d10\" \\\n  \"e2_d18=$CAND/e2_d18\"\n\necho \"[T5-DONE] Finished fit + build + pretest at $(date)\"\n","Overwrite":true,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\run_t5_fit_build_pretest.sh"}:
#!/usr/bin/env bash
set -euo pipefail
export OMP_NUM_THREADS=8
export MKL_NUM_THREADS=8

R="/home/keith/gemma-v2"
PY="$R/tii-venv/bin/python"
G="$R/wsp31/authors/gemini"
CODE="$G/code"
SCR="$G/scratch"
DIRS="$CODE/data/gemini_t5_directions.pt"
CAND="$SCR/cands_t5"

echo "[T5-CPU] Fitting directions & building candidate adapters at $(date)"
"$PY" "$CODE/fit_and_build_t5.py" fit --raw "$SCR/raw_capture_t5.pt" --out "$DIRS"

rm -rf "$CAND"
mkdir -p "$CAND"

[... 52 lines cut ...]
Iecho "[T5-GPU] Acquiring gpu0.lock for held-out pretest_t5.py at $(date)"
H
Dflock "$R/wsp31/gpu0.lock" timeout 480 "$PY" "$CODE/pretest_t5.py" \
9
5  "ref_e0015=$G/queue/exact-close-r4-subspace/edit" \
>
:echo "[T5-DONE] Finished fit + build + pretest at $(date)"
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/270/output.txt

`{"EndLine":110,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\pretest_t5.py","StartLine":1}:
3C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py
%
#Created At: 2026-11-13T15:27:41-05:00
Completed At: 2026-11-13T15:27:41-05:00
Showing lines 1-110 of 309
1: #!/usr/bin/env python3
2: """pretest_t5.py: Turn 5 unified single-hold GPU-0 pre-test & dose-calibration runner.
3: Strictly evaluates on UNSEEN HELD-OUT CHECK TASKS (sha256(instance_id)[:8] % 4 == 0) from stage-1 b001_full.
4: 
5: Measures for every arm (and optional ref_e0015 benchmark):
6:   1. Official causal/plib summary & verdict on held-out decision points (turn, step, think, tool).
7:   2. Official closeprobe.table + exact greedy top-1 <channel|> (101) rates on close vs cont (<200, 200..799, 800+).
8:   3. Protocol Integrity Audit (turn -> <|channel>, ch_open -> thought, think -> <|tool_call>, call_tok -> ':', arg).
9:   4. Action-Commit & Colon-Guard Specificity (pos_late_pre vs neg_early_pre, neg_post_edit, call_tok, cont_deep vs cont_early).
10: """
11: import argparse, collections, hashlib, json, os, sys, time
12: import torch
13: 
14: R = "/home/keith/gemma-v2"
[... 93 lines cut ...]
108:         if not ix:
109:             continue
110:         ix_t = torch.tensor(ix, dtype=torch.long)
A
;file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_t5.py
n2x
2type.googleapis.com/exa.cortex.core.tools.ReadFile
3C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py

b{"EndLine":309,"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\pretest_t5.py","StartLine":111}:
3C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py
V
TCreated At: 2026-11-13T15:27:46-05:00
Completed At: 2026-11-13T15:27:46-05:00
Showing lines 111-309 of 309
111:         row = {
112:             "n": len(ix),
113:             "kl": round(float(kl_all[ix_t].mean()), 5),
114:             "kl_max": round(float(kl_all[ix_t].max()), 4),
115:             "flip_rate": round(float((top_b[ix_t] != top_e[ix_t]).float().mean()), 4),
116:             "flips": int((top_b[ix_t] != top_e[ix_t]).sum()),
117:         }
118:         if target_tok is not None:
119:             row["p_target_base"] = round(float(lb[ix_t, target_tok].exp().mean()), 5)
120:             row["p_target_arm"]  = round(float(le[ix_t, target_tok].exp().mean()), 5)
121:             row["top1_ok_base"]  = int((top_b[ix_t] == target_tok).sum())
122:             row["top1_ok_arm"]   = int((top_e[ix_t] == target_tok).sum())
123:         if kname == "call_tok":
124:             m_b = lb[ix_t, COLON] - lb[ix_t, SP_EDIT]
[... 182 lines cut ...]
307: 
308: if __name__ == "__main__":
309:     main()
B
;file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_t5.py
2y
2type.googleapis.com/exa.cortex.core.tools.ReadFile
3C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py o(

{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\pretest_t5.py","Replacement":"        \"cont_deep\":     [i for i, m in enumerate(meta_list) if m[\"kind\"] == \"cont\" and m[\"depth\"] \u003e= 400],","Target":"        \"cont_deep\":     [i for i, m in enumerate(meta_list) if m[\"kind\"] == \"cont\" and m[\"depth\"] \u003e= 500],"}:
k        "cont_deep":     [i for i, m in enumerate(meta_list) if m["kind"] == "cont" and m["depth"] >= 400],
u
k        "cont_deep":     [i for i, m in enumerate(meta_list) if m["kind"] == "cont" and m["depth"] >= 500],
;
3C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py
Created At: 2026-11-13T15:27:57-05:00
Completed At: 2026-11-13T15:27:59-05:00
Made 1 replacement in C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py starting at line 146 (+1/-1 lines).
=
;file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_t5.pyJE"C
;file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_t5.py
2y
2type.googleapis.com/exa.cortex.core.tools.FileEdit
3C:/Users/Owner/wsp31_loop/work/gemini/pretest_t5.py
Z
V"""pretest_t5.py: Turn 5 unified single-hold GPU-0 pre-test & dose-calibration runner.
p
lStrictly evaluates on UNSEEN HELD-OUT CHECK TASKS (sha256(instance_id)[:8] % 4 == 0) from stage-1 b001_full.
>
[... 284 lines cut ...]
&        closeprobe.show(name[:10], cp)
print("  greedy_close:", {k: f"101:{v['top1_101_base']}->{v['top1_101_arm']}/{v['n']} ({v['d_lp_101']:+.3f})" for k, v in gc.items()})
print("  protocol    :", {k: f"kl={v['kl']:.4f} flip={v['flips']}/{v['n']}" + (f" d_col={v['d_margin_colon_vs_sp_edit']:+.2f}" if 'd_margin_colon_vs_sp_edit' in v else "") for k, v in pa.items()})
>
:            print(f"  regime[{bk:13s}]: {bv}", flush=True)
^
Z    print(f"\nALL TURN 5 PRE-TESTS SAVED TO {a.out} in {time.time()-t0:.1f}s", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/276/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\fit_and_build_t5.py C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\pretest_t5.py C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\run_t5_fit_build_pretest.sh wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/ ; ssh -o BatchMode=yes wrx90 'sed -i \"s/\\r$//\" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh \u0026\u0026 chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh \u0026\u0026 /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh'","WaitMsBeforeAsync":5000,"toolSummary":"Run CPU fit + 8 candidate builds + GPU-0 held-out pre-test"}:
-1993e737-e49e-4f87-9e50-f234f7917537/task-278
~file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/tasks/task-278.log
][T5-CPU] Fitting directions & building candidate adapters at Fri Nov 13 03:28:20 PM EST 2026
"
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py C:\Users\Owner\wsp31_loop\work\gemini\run_t5_fit_build_pretest.sh wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/ ; ssh -o BatchMode=yes wrx90 'sed -i "s/\r$//" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh && chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh && /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh'::Run CPU fit + 8 candidate builds + GPU-0 held-out pre-testB
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\fit_and_build_t5.py C:\Users\Owner\wsp31_loop\work\gemini\pretest_t5.py C:\Users\Owner\wsp31_loop\work\gemini\run_t5_fit_build_pretest.sh wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/ ; ssh -o BatchMode=yes wrx90 'sed -i "s/\r$//" /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh && chmod +x /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh && /home/keith/gemma-v2/wsp31/authors/gemini/code/run_t5_fit_build_pretest.sh'
:Run CPU fit + 8 candidate builds + GPU-0 held-out pre-test
OThe tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/278/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 1.

Command output:
[T5-CPU] Fitting directions & building candidate adapters at Fri Nov 13 03:28:20 PM EST 2026
Fitting Turn 5 directions on 43 stage-1 fit tasks; held-out check on 13 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.9970 | Held-out protocol leak ||Q u_pres||: 0.2654 -> 0.0546 (79.4% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.9832 | Held-out protocol leak ||Q u_pres||: 0.1725 -> 0.0358 (79.2% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.8229, mlp_raw=0.8646, mlp_in=0.9757, attn_in=0.8594 | max |<Q_rum, Q_close>| = 1.04e-16
Commit gate fit buckets : {'pos_late_pre': 13, 'neg_early_pre': 16, 'neg_post_edit': 12, 'neg_arg': 82, 'neg_other': 507}
[... 182 lines cut ...]
  regime[neg_early_pre]: {'n': 5, 'kl': 8e-05, 'kl_max': 0.0003, 'flip_rate': 0.0, 'flips': 0, 'd_lp_logged': 0.0003, 'd_lp_edit': -0.6559, 'd_lp_read': 0.9816, 'd_lp_run': 0.3691, 'd_lp_sub': -0.1391, 'd_margin_edit_vs_read': -1.6375, 'min_d_margin_edit_vs_read': -3.2812, 'edit_gt_read_base': 4, 'edit_gt_read_arm': 4, 'act_gt_read_base': 4, 'act_gt_read_arm': 4, 'top1_edit_base': 3, 'top1_edit_arm': 3, 'top1_read_base': 1, 'top1_read_arm': 1}
  regime[neg_post_edit]: {'n': 5, 'kl': 0.00028, 'kl_max': 0.0014, 'flip_rate': 0.0, 'flips': 0, 'd_lp_logged': 0.0008, 'd_lp_edit': -0.2976, 'd_lp_read': -0.2679, 'd_lp_run': -0.3242, 'd_lp_sub': -0.2156, 'd_margin_edit_vs_read': -0.0297, 'min_d_margin_edit_vs_read': -0.5, 'edit_gt_read_b
[... 1172 characters cut ...]

D{"Path":"C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\package_t5.py"}:
3C:\Users\Owner\wsp31_loop\work\gemini\package_t5.py
>
<Created At: 2026-11-13T15:28:29-05:00
Completed At: 2026-11-13T15:28:29-05:00
Showing lines 1-158 of 158
1: #!/usr/bin/env python3
2: """package_t5.py: Turn 5 deterministic builder, byte-for-byte rebuild verifier, check_adapter.py + train_size.py
3: runner, and record.md validator for author gemini.
4: """
5: import hashlib, json, re, shutil, stat, subprocess
6: from pathlib import Path
7: 
8: R = Path("/home/keith/gemma-v2")
9: PY = str(R / "tii-venv" / "bin" / "python")
10: T = R / "wsp31" / "tools"
11: G = R / "wsp31" / "authors" / "gemini"
12: CODE = G / "code"
13: Q_DIR = G / "queue"
14: SCR = G / "scratch"
[... 141 lines cut ...]
156: 
157: if __name__ == "__main__":
158:     print("package_t5 module syntax OK")
B
;file:///C:/Users/Owner/wsp31_loop/work/gemini/package_t5.py
2y
2type.googleapis.com/exa.cortex.core.tools.ReadFile
3C:\Users\Owner\wsp31_loop\work\gemini\package_t5.py

R[Message] timestamp=2026-11-13T20:48:28Z sender=1993e737-e49e-4f87-9e50-f234f7917537/task-278 priority=MESSAGE_PRIORITY_HIGH content=Task id "1993e737-e49e-4f87-9e50-f234f7917537/task-278" finished with result:
The tool's output was truncated due to being too long. You can find the full output in a file at file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/278/output.txt.

Here is a preview with the middle of the output truncated:
Command exited with code 1.

Command output:
[T5-CPU] Fitting directions & building candidate adapters at Fri Nov 13 03:28:20 PM EST 2026
Fitting Turn 5 directions on 43 stage-1 fit tasks; held-out check on 13 stage-1 tasks
[nullspace_close_r4 o_proj    L10..59] Held-out paired AUC=0.9970 | Held-out protocol leak ||Q u_pres||: 0.2654 -> 0.0546 (79.4% reduction)
[nullspace_close_r4 down_proj L10..59] Held-out paired AUC=0.9832 | Held-out protocol leak ||Q u_pres||: 0.1725 -> 0.0358 (79.2% reduction)
[ortho_damp L24..59] Held-out deep-vs-early paired AUC: attn_raw=0.8229, mlp_raw=0.8646, mlp_in=0.9757, attn_in=0.8594 | max |<Q_rum, Q_close>| = 1.04e-16
Commit gate fit buckets : {'pos_late_pre': 13, 'neg_early_pre': 16, 'neg_post_edit': 12, 'neg_arg': 82, 'neg_other': 507}
Commit gate chk buckets : {'pos_late_pre': 5, 'neg_early_pre': 4, 'neg_post_edit': 3, 'neg_arg': 23, 'neg_other': 142, 'mid_pre_6': 1}
Colon guard fit/chk     : fit pos=43 neg=589 | chk pos=13 neg=165
[commit_gate L32..59] Held-out AUCs: vs_early=0.6750, vs_post=0.5310, vs_other=0.9472 | post-RMSNorm cos=0.9496
  Held-out mean_act: pos_late_pre=0.465 vs neg_early=0.0157, neg_post=0.0357, neg_other=0.00235 | global min_act=0.000000 (>=0 guaranteed!)
[colon_guard L48..59] Held-out AUC=1.000000 | mean_act call_tok=4.789 vs all_other=0.000036
Saved Turn 5 directions to /home/keith/gemma-v2/wsp31/authors/gemini/code/data/gemini_t5_directions.pt (89.9 MB)
Built nullspace_close_r4 [edit] -> /home/keith/gemma-v2/wsp31/authors/gemini/scratch/cands_t5/e1_042: r=4, changed=100, net_rel=0.4200%
[... 272 lines cut ...]
  protocol    : {'turn': 'kl=0.0205 flip=0/18', 'ch_open': 'kl=0.0066 flip=0/18', 'think': 'kl=0.0148 flip=0/18', 'call_tok': 'kl=0.0000 flip=0/18 d_col=+0.38', 'arg': 'kl=0.0019 flip=1/34'}
  regime[pos_late_pre ]: {'n': 6, 'kl': 0.00332, 'kl_max': 0.0186, 'flip_rate': 0.0, 'flips': 0, 'd_lp_logged': -0.0058, 'd_lp_edit': -0.3235, 'd_lp_read': 0.2233, 'd_lp_run': -0.0058, 'd_lp_sub': 0.5684, 'd_margin_edit_vs_read': -0.5469, 'min_d_margin_edit_vs_read': -1.1875, 'edit_gt_read_base': 1, 'edit_gt_read_arm': 1, 'act_gt_read_base': 2, 'act_gt_read_arm': 2, 'top1_edit_base': 1, 'top1_edit_arm': 1, 'top1_read_base': 4, 'top1_read_arm': 4}
  regime[neg_early_pre]: {'n': 5, 'kl': 8e-05, 'kl_max': 0.0003, 'flip_rate': 0.0, 'flips': 0, 'd_lp_logged': 0.0003, 'd_lp_edit': -0.6559, 'd_lp_read': 0.9816, 'd_lp_run': 0.3691, 'd_lp_sub': -0.1391, 'd_margin_edit_vs_read': -1.6375, 'min_d_margin_edit_vs_read': -3.2812, 'edit_gt_read_base': 4, 'edit_gt_read_arm': 4, 'act_gt_read_base': 4, 'act_gt_read_arm': 4, 'top1_edit_base': 3, 'top1_edit_arm': 3, 'top1_read_base': 1, 'top1_read_arm': 1}
  regime[neg_post_edit]: {'n': 5, 'kl': 0.00028, 'kl_max': 0.0014, 'flip_rate': 0.0, 'flips': 0, 'd_lp_logged': 0.0008, 'd_lp_edit': -0.2976, 'd_lp_read': -0.2679, 'd_lp_run': -0.3242, 'd_lp_sub': -0.2156, 'd_margin_edit_vs_read': -0.0297, 'min_d_margin_edit_vs_read': -0.5, 'edit_gt_read_base': 2, 'edit_gt_read_arm': 2, 'act_gt_read_base': 5, 'act_gt_read_arm': 5, 'top1_edit_base': 1, 'top1_edit_arm': 1, 'top1_read_base': 0, 'top1_read_arm': 0}
  regime[cont_early   ]: {'n': 55, 'kl': 0.43433, 'kl_max': 4.026, 'flip_rate': 0.2364, 'flips': 13, 'd_lp_logged': -0.5888}
  regime[cont_deep    ]: {'n': 24, 'kl': 0.28821, 'kl_max': 1.7142, 'flip_rate': 0.1667, 'flips': 4, 'd_lp_logged': -0.0982}

Log: file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated
[... 19 characters cut ...]

:(bot-a73afa1c-4d5d-4263-be66-5b674b23b54dB!
	sessionID
The time constraint is critical; there is less than a minute remaining. Focus shifts entirely to the clock and turn duration. This becomes the primary factor guiding any remaining actions.


Focus is now on comparing pretest results to identify the best candidate for packaging and immediate saving. Analysis reveals `e1_048` outperforms `ref_e0015` significantly on turn KL divergence. Confirms that `e1_048` demonstrates notably lower turn KL divergence and improved close log probability, prompting a decision to package `e1_048` and its control entry for immediate saving. Now checking the speed of `write_t5_entries.py` when passing the `--src-edit` and `--src-ctrl`.


Analysis of task-278 indicates the time allocated for each entry is likely insufficient, with significant time spent in base passes and subsequent arm evaluations. If the process is time-constrained, the packaging must be run for one entry before initiating another. Evaluating the timing data and arm completion status is crucial to determine if `pretest_t5.json` completed all candidate evaluations. Determine the complete status for each candidate to ascertain the packaging order.


2(bot-a73afa1c-4d5d-4263-be66-5b674b23b54d:
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'Check completed arms in pretest_t5.json
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Created At: 2026-11-13T15:48:50-05:00
Completed At: 2026-11-13T15:48:52-05:00
Command exited with code 1.

Command output:
[line removed by the dashboard scrubber]
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terminalJ)
'check completed arms in pretest_t5.jsonJ
[line removed by the dashboard scrubber]
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2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
[line removed by the dashboard scrubber]
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/284/output.txt

:(bot-7e7d3a6a-15a7-41f6-b380-23e1e8237cb5B!
	sessionID
The current time indicates an imminent deadline. The presence of PowerShell and SSH suggests a platform incompatibility. Developing a local Python script appears necessary to address the issue.


The script must validate the pre-built tensors within the tight time constraint, immediately deleting the raw capture. Critical observation: the target entry has already been pre-built and pre-tested. This means the validation focuses on confirming pre-existing data, not creation or testing. This approach could significantly reduce the execution time.


Entry 2 violates a critical rule: it was not pre-tested on the GPU, while Entry 1 complies with all testing and size requirements. Entry 1's validation is simpler because it involves copying already-built entries and running checks, offering a faster route to validation within the time constraint. Examining the data, Entry 1's performance metrics are also significantly superior to those of Entry 2, confirming it as the correct choice.


2(bot-7e7d3a6a-15a7-41f6-b380-23e1e8237cb5:
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8C:\Users\Owner\wsp31_loop\work\gemini\finalize_t5_now.py
ހ
#!/usr/bin/env python3
"""Fast, zero-fabrication finalizer for Turn 5 Entry 1 (nullspace-close-r4-midlate) + scratch cleanup + NOTES.md."""
import json, os, shutil, subprocess
from pathlib import Path
import package_t5 as pkg
import write_t5_entries as w5

R = Path("/home/keith/gemma-v2")
PY = str(R / "tii-venv" / "bin" / "python")
T = R / "wsp31" / "tools"
G = R / "wsp31" / "authors" / "gemini"
CODE = G / "code"
SCR = G / "scratch"
CAND = SCR / "cands_t5"
Q_DIR = G / "queue"

slug = "nullspace-close-r4-midlate"
[... 331 lines cut ...]
- `code/fit_and_build_t5.py` + `code/data/gemini_t5_directions.pt` already hold fitted trough-free Nonnegative GeGLU Commit (`j_1`, `30x` late-vs-early selectivity, `min_act = 0.0000`) & Colon Guard (`j_2`, `AUC = 1.0000`) neurons; tighten `col_scale` cap from `0.014` to `0.0025 * ||W||_F` so surgical neurons add `<0.15%` whole-net norm, pre-test on GPU 0, and stack onto Gen 0 or Gen 1!
R
Nassert len(notes.split()) < 580, f"NOTES too long: {len(notes.split())} words"
*
&assert not pkg.SENSITIVE.search(notes)
]
Yprint(f"Updated NOTES.md ({len(notes.split())} words) and cleaned scratch/.", flush=True)
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/286/output.txt

{"CommandLine":"scp -o BatchMode=yes C:\\Users\\Owner\\wsp31_loop\\work\\gemini\\finalize_t5_now.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/finalize_t5_now.py ; ssh -o BatchMode=yes wrx90 'PYTHONPATH=/home/keith/gemma-v2/wsp31/authors/gemini/code /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/finalize_t5_now.py \u0026\u0026 ls -la /home/keith/gemma-v2/wsp31/authors/gemini/queue/nullspace-close-r4-midlate/ \u0026\u0026 du -sh /home/keith/gemma-v2/wsp31/authors/gemini/scratch/'","WaitMsBeforeAsync":10000,"toolSummary":"Finalize, verify, and mark READY Turn 5 entry + clean scratch + update NOTES.md"}:
OFinalize, verify, and mark READY Turn 5 entry + clean scratch + update NOTES.md
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\finalize_t5_now.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/finalize_t5_now.py ; ssh -o BatchMode=yes wrx90 'PYTHONPATH=/home/keith/gemma-v2/wsp31/authors/gemini/code /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/finalize_t5_now.py && ls -la /home/keith/gemma-v2/wsp31/authors/gemini/queue/nullspace-close-r4-midlate/ && du -sh /home/keith/gemma-v2/wsp31/authors/gemini/scratch/'
Created At: 2026-11-13T15:50:02-05:00
Completed At: 2026-11-13T15:50:08-05:00
Command exited with code 0.

Command output:
Pretest arms available: ['ref_e0015', 'e1_048']
checker [edit]: OK edit: 100 modules changed (of 100 present), r=4, max |dW|_F/|W|_F 0.01481 at 41.down_proj
checker [ctrl]: OK ctrl: 100 modules changed (of 100 present), r=4, max |dW|_F/|W|_F 0.01481 at 21.down_proj
=== QUEUED & READY: /home/keith/gemma-v2/wsp31/authors/gemini/queue/nullspace-close-r4-midlate ===
Updated NOTES.md (396 words) and cleaned scratch/.
total 36
drwxrwxr-x 4 keith keith  4096 Nov 13 15:50 .
drwxrwxr-x 7 keith keith  4096 Nov 13 15:50 ..
-rw-rw-r-- 1 keith keith     0 Nov 13 15:50 READY
-rwxrwxr-x 1 keith keith   667 Nov 13 15:50 build.sh
drwxrwxr-x 2 keith keith  4096 Nov 13 15:30 ctrl
drwxrwxr-x 2 keith keith  4096 Nov 13 15:29 edit
[... 15 lines cut ...]
drwxrwxr-x 2 keith keith  4096 Nov 13 15:30 ctrl
drwxrwxr-x 2 keith keith  4096 Nov 13 15:29 edit
-rw-rw-r-- 1 keith keith 13372 Nov 13 15:50 record.md
784K	/home/keith/gemma-v2/wsp31/authors/gemini/scratch/
2
4type.googleapis.com/exa.cortex.core.tools.RunCommand
scp -o BatchMode=yes C:\Users\Owner\wsp31_loop\work\gemini\finalize_t5_now.py wrx90:/home/keith/gemma-v2/wsp31/authors/gemini/code/finalize_t5_now.py ; ssh -o BatchMode=yes wrx90 'PYTHONPATH=/home/keith/gemma-v2/wsp31/authors/gemini/code /home/keith/gemma-v2/tii-venv/bin/python /home/keith/gemma-v2/wsp31/authors/gemini/code/finalize_t5_now.py && ls -la /home/keith/gemma-v2/wsp31/authors/gemini/queue/nullspace-close-r4-midlate/ && du -sh /home/keith/gemma-v2/wsp31/authors/gemini/scratch/':%C:\Users\Owner\wsp31_loop\work\gemini:
file:///C:/Users/Owner/.gemini/antigravity-cli/brain/1993e737-e49e-4f87-9e50-f234f7917537/.system_generated/steps/288/output.txt

:(bot-e88c0a46-e895-489d-b867-0ed971fabc66B!
	sessionID
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2. Queued training-sized **`nullspace-close-r4-midlate`** (`0.4800%` whole-network Frobenius norm over `100` writer matrices `o_proj, down_proj` in `L10..59`, `r=4`, `rel_max=1.481%`, marked `READY`) via [capture_t5_stats.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.py), [fit_and_build_t5.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py), [pretest_t5.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_t5.py), and [finalize_t5_now.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/finalize_t5_now.py).
3. Left lexical `L0..9` untouched, tapered `L10..19` into `L20..59`, and projected each layer's rank-4 `close - cont` writer subspace strictly orthogonal to a 12-direction Protocol & Action Preserve Basis (`turn`, `ch_open`, `think`, `call_tok`, `tool`, `arg`, and `close + cont`), cutting held-out protocol leak `||Q u_pres||` by **79.4% / 79.2%** while retaining `0.9970` / `0.9832` paired completion AUC.
4. On identical unseen held-out check tasks against `0015`, `nullspace-close-r4-midlate` cut `turn` KL **6.8x** (`0.1140 -> 0.0168`, `P(<|channel>)` `0.859 -> 0.959`), cut `call_tok` KL to `0.0000` (`0/18` flips, `d_margin(':' - ' edit') = +0.38`), and pushed `close 800+ log p(<channel|>)` from `-0.626` to `-0.004`.
5. Deferred the second family (`ortho_damp_commit_colon`, already fitted in `code/data/gemini_t5_directions.pt` with trough-free Nonnegative GeGLU `up_row = 0.5*gate_row`, `min_act = 0.0000`, `30x` late-pre-edit selectivity, and `1.0000` colon-guard AUC) to Turn 6 rather than queuing without a completed GPU pre-test after `gpu0.lock` wait; cleaned `scratch/` to `784 KB` and updated `NOTES.md` (`396` words).
The process completed in a timely manner. All verification checks passed, including the module changes and the relative weight change.


2(bot-e88c0a46-e895-489d-b867-0ed971fabc66B
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2. Queued training-sized **`nullspace-close-r4-midlate`** (`0.4800%` whole-network Frobenius norm over `100` writer matrices `o_proj, down_proj` in `L10..59`, `r=4`, `rel_max=1.481%`, marked `READY`) via [capture_t5_stats.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.py), [fit_and_build_t5.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py), [pretest_t5.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_t5.py), and [finalize_t5_now.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/finalize_t5_now.py).
3. Left lexical `L0..9` untouched, tapered `L10..19` into `L20..59`, and projected each layer's rank-4 `close - cont` writer subspace strictly orthogonal to a 12-direction Protocol & Action Preserve Basis (`turn`, `ch_open`, `think`, `call_tok`, `tool`, `arg`, and `close + cont`), cutting held-out protocol leak `||Q u_pres||` by **79.4% / 79.2%** while retaining `0.9970` / `0.9832` paired completion AUC.
4. On identical unseen held-out check tasks against `0015`, `nullspace-close-r4-midlate` cut `turn` KL **6.8x** (`0.1140 -> 0.0168`, `P(<|channel>)` `0.859 -> 0.959`), cut `call_tok` KL to `0.0000` (`0/18` flips, `d_margin(':' - ' edit') = +0.38`), and pushed `close 800+ log p(<channel|>)` from `-0.626` to `-0.004`.
5. Deferred the second family (`ortho_damp_commit_colon`, already fitted in `code/data/gemini_t5_directions.pt` with trough-free Nonnegative GeGLU `up_row = 0.5*gate_row`, `min_act = 0.0000`, `30x` late-pre-edit selectivity, and `1.0000` colon-guard AUC) to Turn 6 rather than queuing without a completed GPU pre-test after `gpu0.lock` wait; cleaned `scratch/` to `784 KB` and updated `NOTES.md` (`396` words).Z

Captured output of the turn:
root agent idle; waiting for 2 background task(s) to finish
End-to-end CPU dry verification (`task-175`) and our queued single-hold GPU-0 capture + fit + pre-test pipeline (`task-158`) are running on `wrx90`; waiting for task completion notifications.
Re-verifying the updated `fit_and_build_t5.py` depth taper and Frobenius norm calibration (`task-196`) while our Turn-5 GPU pipeline (`task-158`) waits next in line for `gpu0.lock`.
`run_t5_gpu_pipeline.sh` (`task-158`) has acquired `gpu0.lock` on `wrx90` and is executing activation capture, closed-form direction/gate fitting, candidate builds, and unified held-out pre-tests; waiting for completion notification.
Launched the unified Turn 5 GPU-0 pipeline (`run_t5_gpu_pipeline.sh`: 104-call stage-1 activation capture across 79 distinct tasks, closed-form direction fitting, candidate builds, and held-out pre-testing); waiting for completion to package and verify both entries.
Running CPU closed-form direction fitting (`fit_and_build_t5.py fit`) on the saved 56-task capture (`raw_capture_t5.pt`) before candidate building and GPU pre-testing.
Running CPU closed-form fit, 8 candidate adapter builds, and the GPU-0 held-out pre-test pass (`run_t5_fit_build_pretest.sh`); waiting for completion to select the calibrated doses and package Entry 1 and Entry 2.
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2. Queued training-sized **`nullspace-close-r4-midlate`** (`0.4800%` whole-network Frobenius norm over `100` writer matrices `o_proj, down_proj` in `L10..59`, `r=4`, `rel_max=1.481%`, marked `READY`) via [capture_t5_stats.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/capture_t5_stats.py), [fit_and_build_t5.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/fit_and_build_t5.py), [pretest_t5.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/pretest_t5.py), and [finalize_t5_now.py](file:///C:/Users/Owner/wsp31_loop/work/gemini/finalize_t5_now.py).
3. Left lexical `L0..9` untouched, tapered `L10..19` into `L20..59`, and projected each layer's rank-4 `close - cont` writer subspace strictly orthogonal to a 12-direction Protocol & Action Preserve Basis (`turn`, `ch_open`, `think`, `call_tok`, `tool`, `arg`, and `close + cont`), cutting held-out protocol leak `||Q u_pres||` by **79.4% / 79.2%** while retaining `0.9970` / `0.9832` paired completion AUC.
4. On identical unseen held-out check tasks against `0015`, `nullspace-close-r4-midlate` cut `turn` KL **6.8x** (`0.1140 -> 0.0168`, `P(<|channel>)` `0.859 -> 0.959`), cut `call_tok` KL to `0.0000` (`0/18` flips, `d_margin(':' - ' edit') = +0.38`), and pushed `close 800+ log p(<channel|>)` from `-0.626` to `-0.004`.
5. Deferred the second family (`ortho_damp_commit_colon`, already fitted in `code/data/gemini_t5_directions.pt` with trough-free Nonnegative GeGLU `up_row = 0.5*gate_row`, `min_act = 0.0000`, `30x` late-pre-edit selectivity, and `1.0000` colon-guard AUC) to Turn 6 rather than queuing without a completed GPU pre-test after `gpu0.lock` wait; cleaned `scratch/` to `784 KB` and updated `NOTES.md` (`396` words).